Fungi are the hidden architects of our ecosystems, acting as everything from helpful partners for plants to aggressive decomposers that recycle dead wood. However, many fungi don’t stick to just one job; they can switch lifestyles depending on their environment.
Understanding this flexibility is vital for predicting how forests and farms will react to climate change. Unfortunately, the information researchers need is buried in decades of scientific papers that would take too long to comb through manually.
A new study led by Northern Arizona University doctoral student Beatrice M. Bock and published in the open-access journal Research Ideas and Outcomes demonstrates how AI can solve this problem. By using a specialized language model called BioBERT, Bock developed an automated workflow that assesses scientific abstracts and accurately identifies whether a fungus has a single lifestyle or a dual, flexible one.
A high-accuracy hack
Bock said that for years, mycologists have relied on manual databases to track what different fungi do in the environment. While these tools are essential, they are difficult to keep updated as new research is published every day.
“Manually identifying fungal versatility from the literature is time-consuming and difficult to scale. By using machine learning, we can now scan thousands of papers in just a few minutes to flag species that might be switching roles—such as a fungus that normally helps a plant grow but also turns into a decomposer when the plant dies.”
Beatrice M. Bock
The pilot study tested four different AI models to see which was best at understanding the nuances of biological language. The top-performing model, BioBERT, achieved nearly 90% accuracy in identifying fungal lifestyles.
What did BioBERT have that the other models didn’t? For one, it had the power of capitalization. Bock found that “cased” models—those that recognize capital letters—performed significantly better than those that did not. That’s likely because capital letters often signal species’ scientific names, like Fusarium, which are crucial for AI to understand the context of the research.
The path ahead
Bock said that in a commitment to transparency, she has made all the code and data available for free online, allowing other scientists to build upon her work and track traits in other organisms, like insects or plants.
While Bock’s study focused on a small group of papers as a proof-of-concept, it opens the door for much larger projects. Future versions of the tool could predict how a fungus’s behavior might change under specific environmental conditions, such as drought or extreme heat.
“As fungal trait databases continue to grow in importance for biodiversity assessments, automated text mining offers a path toward more efficient, consistent and comprehensive trait annotation.”
Beatrice M. Bock
Original sources:
Bock B (2026) Automated extraction of fungal trophic modes from literature using BioBERT: an open pilot workflow. Research Ideas and Outcomes 12: e176590. https://doi.org/10.3897/rio.12.e176590
Story originally published by: EurekAlert! (2026). Using AI to uncover the secret lives of fungi. [online] Available at: https://www.eurekalert.org/news-releases/1114462 [Accessed 2 Feb. 2026]. Republished with permission.
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Prophy’s AI-driven discovery system will provide editors with a broader and more diverse pool of qualified peer reviewers based on automated semantic analysis.
In a new partnership between open-access scholarly publisher Pensoft and the AI-driven reviewer discovery system provider: Prophy, the editorial teams at all journals hosted on the publisher’s ARPHA Platform receive access to a broader and more diverse global pool of researchers.
The integration connects ARPHA’s editorial and peer review workflows with Prophy’s continuously updated database of millions of active, qualified researchers. As a result, editorial teams across more than 90 open-access peer-reviewed journals powered by ARPHA can now opt to enjoy data-driven reviewer recommendations based on structured analysis of researcher expertise and publication history, with matches based on each manuscript’s topic, field, and research focus.
This development responds to a growing challenge in scholarly publishing. As submission volumes rise, the pressure on a relatively small pool of frequently invited reviewers increases, which eventually leads to delays and reviewer fatigue. By expanding the pool of potential experts and improving how they are identified with the help of semantic analysis, the integration supports a more sustainable and balanced approach to peer review.
“By working with Prophy, we’re helping editors discover expertise that might otherwise be overlooked, opening the door to a more inclusive, well-distributed, and resilient peer review ecosystem. This is about using technology not to replace human judgment, but to support it in a smarter and more responsible way.”
Prof. Dr. Lyubomir Penev, founder and CEO of Pensoft and ARPHA.
“We’re excited to work with Pensoft and ARPHA to bring smarter reviewer discovery to their editorial teams. Peer review should be efficient and fair, and this partnership helps with both. Editors can find the right expertise faster, which means less time searching and fewer delays. This integration helps editorial teams manage growing submission volumes without burning out their reviewer networks.”
Oleg Ruchayskiy, CEO of Prophy.
To further support editorial teams and client journals’ owners, Pensoft and ARPHA are offering the Prophy integration free of charge to all journals on the platform until the end of 2026.
The partnership reflects Pensoft and ARPHA’s continued focus on equipping journals with practical, forward-looking tools that strengthen peer review, support editors, and help ensure the long-term sustainability of scholarly publishing.
Stay up to date with the latest from Pensoft and ARPHA by subscribing to our blogs and following us on social media, including BlueSky, Facebook and Linkedin.
The agreement encompasses five key research and medical bodies, and allows corresponding authors to publish their findings without individual Article Processing Charges.
Pensoft and the University of Zurichhave signed a comprehensive Open Access (OA) agreement, starting a partnership that enables researchers at participating institutions to publish their findings in Pensoft’s peer-reviewed journals without incurring individual Article Processing Charges (APCs).
Under this new framework, publishing costs for corresponding authors affiliated with the respective institutions are 100% covered by a centralised institutional deposit secured by the University of Zurich. By removing financial barriers, the agreement encourages scientists to disseminate their work to both the academic community and the wider public, making research immediately and freely available upon publication.
This initiative ensures that research is shared under open licences in strict accordance with the FAIR principles—making data Findable, Accessible, Interoperable, and Reusable.
“We are excited to start this partnership with the University of Zurich and sign an agreement that reflects our strong commitment to inclusive and equitable open science. By supporting researcher-driven publishing, we continue to foster a sustainable environment for high-impact scientific communication.”
Prof. Lyubomir Penev, CEO of Pensoft
“We are pleased to extend our portfolio of gold open access journals, in which our researchers can publish their findings without paying individual APCs. We thereby strengthen our commitment to open research information.”
University Library Zurich
Are you affiliated with a research institution operating with OA agreements? Is your institution interested in helping resident researchers navigate the complex processes underpinning academic publishing and knowledge sharing? Reach out to <publishing@pensoft.net> to discuss a potential collaboration.
A new Frontiers of Biogeography study shows zoantharian hexacorals defy biogeographic norms with narrow genetic differences across the Atlantic and Indo-Pacific.
Guest blog post by Dr. Maria “Duda” Santos and Maria Frostic
In the realm of marine biogeography, there is a widely held scientific principle: the Atlantic and Indo-Pacific oceans are worlds apart. If you dive in Brazil and then in Okinawa, you expect to see entirely different groups of fish and coral. But according to a new global study published today in Frontiers of Biogeography, one group of colorful hexacorals, anemone-like creatures—known as zoantharians—is breaking all the rules.
Underwater view in a Malaysian coral reef with Duda searching for zoantharian species. Photo by Sam Webster.
“During my first dive in Okinawa, I was surrounded by a multitude of species I had never seen in my homeland of Brazil. But then I saw the zoantharians. They looked exactly like the ones back home—the same colors, shapes, and sizes. It was striking.”
shares Dr. Santos
While the Indo-Pacific typically hosts ten times the species diversity of the Atlantic for most reef animals, this research found that the genetic and morphological divergencebetween oceans for these creatures is surprisingly narrow.
The Secrets of the Ultimate Travelers
Sibling zoantharians from the Indo-Pacific (A) and the Atlantic (B) oceans. Images by Dr. Maria “Duda” Santos.
The researchers suggest that zoantharians may be the ultimate oceanic travelers. Their secret likely lies in high dispersal via an “epic” larval phase, where young zoantharians can survive in open water for over 100 days, paired with an ability to “raft” across ocean basins by hitchhiking on floating objects.
Furthermore, an unusually slow evolutionary rate appears to keep distant populations looking and acting like siblings, even after millions of years of separation by continental barriers.
This discovery has major implications for the future of our oceans. As climate change stresses traditional stony corals, zoantharians are increasingly moving in to fill the void.
“In habitats impacted by stress, some zoantharian species can outcompete stony corals. We are seeing ‘phase shifts‘ where reefs once dominated by corals are being taken over by zoantharians. Understanding how they spread helps us forecast what the reefs of the future will look like.”
explains Dr. Santos
A Global Atlas for a Changing Ocean
This landmark study represents a massive international effort, uniting a team from Hawai’i, Okinawa, Russia, Brazil, Hong Kong, Taiwan, and Indonesia. By combining DNA data and records from Mexico to the Philippines, the team has provided the first-ever global “atlas” for a group of animals that has remained in the shadows of their more famous coral cousins for decades. This map of the past and present provides a vital baseline for monitoring how marine life will navigate a warming world.
Original source
Santos, M.E.A., Kise, H., Fourreau, C.J.L., Kiriukhin, B., Kitahara, M.V., Baker, D.M., Toonen, R.J., Liu, P.J., Chang, A., Tu, T.-H., Widiastuti, Agustini, K.M.P., Bowen, B.W. and Reimer, J.D. (2026). Global biogeography of zoantharians indicates a weak genetic differentiation between the Atlantic and Indo-Pacific oceans, and distinct communities in tropical and temperate provinces. Frontiers of Biogeography, 19. doi: https://doi.org/10.21425/fob.19.174247
With deep historical roots and a commitment to high-quality peer-reviewed research, the two journals have officially transitioned to Pensoft’s advanced publishing platform, ARPHA, marking a new chapter in their Open Access journey.
Dr. Daniel Marty, associate lecturer at the University of Basel, will continue to lead both SJP and SJG as the Chief Editor.
The Swiss Journal of Palaeontology (SJP), published on behalf of the Swiss Academy of Sciences (SCNAT), dates back to 1874. The journal launched under the name “Schweizerische Paläontologische Abhandlungen (Mémoires Suisses de Paléontologie)”, focusing primarily on the publication of palaeontological monographs.
Subsequently, the journal’s stewardship transitioned formally to the SCNAT in 1940, leading to the establishment of the Kommission für die Schweizerischen Paläontologischen Abhandlungen (KSPA), which has since managed the journal’s dedicated funds. After decades of irregular publication with “Birkhäuser” (obtained by Springer in 1985), the journal was rebranded to its current name in 2011 and established as a scientific peer-reviewed journal.
More recently, in response to a 2020 decision, made by the Swiss National Science Foundation (SNSF) to cease supporting traditional ‘subscription model’ journals, the SJP transitioned to a fully Open Access model. In 2025, the SJP became officially affiliated with the Swiss Geological Society (SGS). With the previous publishing contract concluding in late 2025, KSPA and SGS have partnered with Pensoft Publishers “where processes are more streamlined to the needs of the SJP.”
The SJP continues to be a vital home for research spanning alpha taxonomy, systematics, palaeobiology, biostratigraphy, and conservation palaeontology, among many other specialized fields.
The first three publications from SJP are now available on the journal’s new website along with an editorial by the Editor-in-Chief. Additionally, you can use the email alert button on the homepage of SJP to subscribe for the journal newsletter.
The Swiss Journal of Geosciences (SJG) is the other journal with a rich history, published on behalf of the Swiss Geological Society and is a member of the Swiss Academy of Sciences. It was first published in 1888 as “Eclogae Geologicae Helvetiae”. From the 1920s until 2006, it was published in collaboration with Birkhäuser, eventually merging in 2006 with the Schweizerische Mineralogische und Petrographische Mitteilungen (SMPM, first published in 1921) and was then renamed to Swiss Journal of Geosciences. After the Swiss National Science Foundation (SNSF) decided to stop supporting traditional ‘subscription model’ journals, SJG transitioned to a fully Open Access format in 2020.
As of the beginning of 2026, the journal will be published by Pensoft “where processes are more streamlined to the needs of the SJG”. The journal continues to focus on original research of international interest regarding the evolution of the Tethys realm and the Alpine/Himalayan orogen, covering disciplines such as Tectonics, Geochemistry, and Orogenesis and many more.
The first three publications of SJG under this new partnership, along with an editorial by the Editor-in-Chief, are now available on the journal’s new website.
Now powered by Pensoft’s open-access scholarly publishing platform
In joining Pensoft, both SJP and SJG will get access to improved publishing infrastructure and benefit from increased visibility and discoverability for their published research. The journal will use Pensoft’s self-developed platform, ARPHA – an end-to-end publishing solution that makes it easy for both people and machines to access, cite, and reuse research. With its design, ARPHA streamlines publishing workflows, providing a single online ecosystem for the entire editorial process, from manuscript submission to peer review, editing, publication, and archiving.
“The migration of SJG and SJP to Pensoft Publishers will permit both journals to grow in a sustainable way and that it will considerably increase their visibility and quality as they will benefit from streamlined and professional processes and services offered by Pensoft. This will be a big advantage for our authors.”
Said the Swiss Geological Society and Dr. Daniel Marty, Editor-in-Chief of both Swiss journals
“We are thrilled to welcome both the Swiss Journal of Palaeontology and Swiss Journal of Geosciences to the Pensoft family of next-generation scientific journals. We appreciate this new partnership and look forward to seeing the journal thrive using our advanced publishing services.”
Prof Lyubomir Penev, CEO and Founder of Pensoft commented
By translating global food trade flows into biodiversity loss transfers, the dataset maps how, and through which trade links, ecological impacts shift across borders.
Global food trade is essential for food security but its ecological consequences often remain unseen. A new data paper published in One Ecosystem introduces a global long-term dataset, quantifying biodiversity loss embodied in the international trade of staple food crops. As such, this dataset offers a novel perspective on how food trade redistributes environmental pressures worldwide.
Developed by Dr Zhuofan Huang, Dr Zhenglei He and Zelin Xing of the Guangdong University of Technology in Guangzhou, China, the dataset spans 1995–2022 and focuses on four major staple crops: wheat, soybean, rice and maize. By integrating bilateral trade data from UN Comtrade with agricultural production statistics from FAOSTAT and biodiversity loss intensity factors expressed as the Potential Disappeared Fraction (PDF), the dataset translates food trade flows into quantifiable biodiversity loss transfers between countries.
The resulting global network includes 157 countries and up to 91,414 trade relationships, capturing the dynamic evolution of biodiversity loss embedded in staple food trade over nearly three decades. Unlike previous studies that examine agricultural biodiversity impacts at national or sectoral levels, this dataset explicitly maps how biodiversity loss is transferred across borders through international trade.
Global biodiversity loss embodied in staple food trade (1995–2022)
Initial analyses reveal a strong upward trend in biodiversity loss embodied in global staple food trade. Among the four crops, soybean trade shows the most rapid increase, with biodiversity loss rising more than sixfold from 1995 to 2022, and surpassing wheat as the dominant contributor in recent years. The findings also highlight the central role of major agricultural producers and traders (including the United States, Brazil, China, Australia and Argentina) in shaping global biodiversity loss patterns.
Major trade pathways transferring biodiversity loss in global staple food trade between 1995-2022 (Huang et al., 2026)
The authors have openly released this dataset, therefore providing a valuable resource for interdisciplinary research and policy analysis. The data can support assessments of environmental responsibility in food supply chains, help identify high-risk trade pathways, and inform the development of more sustainable and equitable global food trade policies – these factors will in turn contribute to biodiversity conservation and the achievement of the UN Sustainable Development Goals 15 (Life on Land).
Original source:
Huang Z, He Z, Xing Z (2026) Dataset of Biodiversity Loss in Global Staple Food Trade, 1995-2022. One Ecosystem 11: e159884. https://doi.org/10.3897/oneeco.11.e159884
The agreement covers almost 100 institutions, including Karolinska Institutet, Lund University, Uppsala University, and the Royal Swedish Academy of Sciences.
Pensoft and the Bibsam Consortium, operated by the National Library of Sweden, are pleased to announce the signing of a comprehensive Open Access (OA) agreement, marking a significant step in the transition towards a more transparent and open scholarly publishing landscape in Sweden.
Thanks to this move, researchers at participating institutions will be able to publish their findings in 65 journals published by Pensoft or using its advanced publishing platform ARPHA, including flagship titles such as ZooKeys, PhytoKeys, Biodiversity Data Journal, NeoBiota and IMA Fungus, without incurring individual article processing charges (APCs).
All authors affiliated with participating institutions can benefit from this agreement, with publishing costs 100% covered by an institutional deposit secured by the National Library of Sweden.
Unlike subscription-based systems, an OA framework ensures that scientific findings are immediately and freely available to the global community, supporting the global shift toward accessible science and adhering to the FAIR principles (Findable, Accessible, Interoperable, and Reusable).
OA agreements like this one reduce the financial burden on scientists and encourage them to share their work with both academia and the wider public, ultimately lowering barriers to sharing knowledge in a time when scientific input is key to resolving global challenges.
“We are excited to start this partnership with Bisbam and sign an agreement that reflects our strong commitment to open science. By supporting researcher-driven publishing, we continue to foster a sustainable environment for high-impact scientific communication.”
Prof. Lyubomir Penev, CEO of Pensoft
“We are delighted to announce the addition of Pensoft Publishers to our portfolio of nationally funded agreements for 2026. This represents an important step towards achieving full open access to scientific publications in Sweden.”
Niklas Willén, License Manager at Bibsam Consortium and National Library of Sweden
Are you affiliated with a research institution operating with OA agreements? Is your institution interested in helping resident researchers navigate the complex processes underpinning academic publishing and knowledge sharing? Reach out to <publishing@pensoft.net> to discuss a potential collaboration.
Estuarine Management and Technologies now accepted in the Directory of Open Access Journals: a key scientific index, internationally renowned as a trusted quality filter for open-access journals.
Having EMT accepted by DOAJ means that the journal has successfully passed a thorough assessment concerning its compliance with global standards of ethics, transparency and quality. The evaluation conducted by DOAJ includes an examination of the journal’s peer-review processes, editorial governance, transparency (e.g. publication fees, funding) and ethical policies (e.g. plagiarism, conflicts of interest). For many institutions, funders and libraries, DOAJ is seen as a credibility signal that distinguishes legitimate journals from predatory and/or low-quality ones.
The journal’s recognition comes only two years after the journal was launched as part of a promising joint initiative between a team of scientists headed by Dr. Soufiane Haddout (Ibn Tofail University, Morocco) and the open-access scientific publisher and technology provider Pensoft.
All articles published in the journal are already indexed and browsable on DOAJ. Future papers will be fetched by the platform right after they are published in EMT due to the automated data export workflows powered by Pensoft’s in-house ARPHA Publishing Platform.
Since early 2024, the journal has been seeking to support the exchange of research findings and ideas related to the conservation and sustainable management of estuarine ecosystems by utilising new technology and novel approaches. To further support scientists from around the globe, the journal operates under a Diamond Open Access model, meaning that neither publishing, nor reading incurs charges for authors or readers, respectively.
Today, EMT welcomes studies from a wide spectrum of disciplines, including physics, chemistry, geology, biology, and hydrology, with a focus on interdisciplinary, multifaceted approaches and holistic perspectives. A unique feature of the journal is its diverse range of publication types, such as Education & Communication, Estuarine scientists and Video paper in 180s.
“We are proud to announce that Estuarine Management and Technologies has achieved indexing in the Directory of Open Access Journals: our first significant milestone on the path to greater visibility and impact in the global scholarly community,”
said Dr. Soufiane Haddout, on behalf of the journal’s Editorial Board.
“This crucial first step in our indexing journey validates EMT’s commitment to rigorous, transparent, and immediately accessible research on technological innovations for estuarine research, management, and conservation. DOAJ inclusion enhances discoverability for our authors’ work and strengthens our role in advancing interdisciplinary solutions for these vital ecosystems.We are grateful to our authors, reviewers, and the Pensoft team,”
With 55% of its native habitat gone, the Cerrado is in crisis. Preserving this biodiversity hotspot demands immediate reform and the protection of Indigenous rights.
“In addition to surviving some of the poorest soils in intertropical Brazil, the vegetation of the Cerrado has achieved the ecological feat of withstanding wildfires, rising from its own ashes like a kind of phoenix among Brazil’s ecosystems. It cannot, however, withstand the violent technological artifices invented by so-called civilized men.”
Aziz Ab’Saber, 2003 (translated)
Often overshadowed by the Amazon, the Cerrado is the second-largest Ecodomain in South America. Despite covering 24% of the territory and sustaining major watersheds, it has historically been sidelined in global conservation dialogues.
Our detailed review recently published in Nature Conservation warns that this biodiversity hotspot is currently facing a massive, multi-faceted ecological crisis. Despite its significance, the region has seen more than 55% of its native vegetation converted, an area exceeding 1 million km², with the vast majority of this destruction occurring within the last five decades.
Land use and land cover (LULC) in the Cerrado Ecodomain in 1985 and 2023, revealing significant changes in the spatial structure of the territory. An intensification of human activities can be observed, with emphasis on agricultural expansion, which resulted in the significant replacement of native vegetation by alternative uses. This process represents an accelerated landscape transformation over the last four decades. These maps were made using the Cerrado shapefile developed by Cássio Cardoso Pereira, with LULC data available from MapBiomas (2024).
While recent data suggests a slight reduction in annual deforestation rates, the accumulated loss continues to climb, making the Cerrado the Ecodomain in Brazil with the greatest loss of native vegetation.
Annual clearing in the Cerrado (2001–2025) according to PRODES (INPE 2025). Bars represent the total area cleared each year (km²), with colors ranging from dark orange (highest values) to light orange (lowest values), indicating relative variation in intensity. Arrows indicate the percentage change compared to the previous year: increases (↑, red), decreases (↓, green), and stability (→, black, 0.0%). These data do not detect degradation, only complete removal of natural vegetation. Annual data refer to the so-called “reference year”, which runs from August of one year to July of the following year, based on satellite images with a resolution of 10 to 30 meters. The icons used in this figure are from Wikimedia licensed under CC BY-SA 4.0. Figure design: Cássio Cardoso Pereira.
This expansion is driven by a combination of agricultural and urban growth, mining, and land speculation, creating a landscape that is increasingly fragmented and ecologically compromised.
Inverted forest and hidden carbon
One of the things that make Cerrado truly unique is its “inverted forest“. Unlike tropical rainforests that store their biomass in high canopies, the Cerrado has achieved an ecological feat of survival by storing approximately 90% of its carbon belowground through massive, deep root systems. This underground network makes the Ecodomain a critical carbon sink and a primary regulator of water.
Schematic representation of the distribution of carbon stocks in the Cerrado, characterized as an “inverted forest” due to the predominance of biomass and carbon belowground. Estimates were obtained from Terra et al. (2023). Figure design: Walisson Kenedy-Siqueira.
However, misguided restoration efforts that focus solely on planting exotic trees in naturally open areas can further exacerbate this issue, highlighting the need for restoration strategies that prioritize ecological functionality and native seed banks over simple afforestation.
Ecosystem diversity and conservation challenges
However, it is not just the vast tropical savanna in Cerrado that makes up this inverted forest, but the complex and interdependent mosaic of grasslands, savannas, and forests, each with distinct structures, ecological processes, and vulnerabilities. Treating it as homogeneous invisibilizes both grassland and forest formations, complicating effective conservation policies.
For example, natural grasslands, especially in the montane Campos Rupestres, occupy limited areas, harbor high endemism, and face strong pressures from mining, biological invasions, and increased fire. Whilst savannas, although dominant in the area, have been widely converted into monocultures, exotic pastures, and forestry, compromising ecological integrity.
Main anthropogenic threats to the Cerrado resulting from land-use changes, ranked by impact on each ecosystem type (I–III: grassland, savanna, and forest). The ecosystems illustrated are according to Ribeiro and Walter (2008). For more details on each ecosystem. Figure design: Walisson Kenedy-Siqueira.
Even though some species are adapted to natural fire, many ecosystems, such as forests, the marshland formationsVeredas, and the montane Campos Rupestres, are highly vulnerable. Exotic species invasions and increased frequency and intensity of fires exacerbate ecological losses even without direct deforestation. We’ve found out that nearly all fires in the Cerrado are human-induced and occur outside natural regimes, causing cumulative degradation.
Threatened biodiversity and conservation gaps
Our research highlights a troubling pattern of ‘silent extinctions’ across the Cerrado. While this Ecodomain is home to thousands of unique plants and animals, we have identified a massive gap in how these species are monitored. Plants and invertebrates are the most threatened yet the least studied. This means species are vanishing before they can even be scientifically documented. Current policies are failing because they rely on incomplete data; we cannot protect what we have not yet cataloged. To prevent total collapse, we must expand our conservation criteria to protect not just individual species, but the complex ecological interactions that sustain the region’s water and soil.
Percentage distribution of threatened species among different biological groups in the Cerrado. The information was adapted from the IUCN Red List (2024), the Flora and Funga of Brazil portal (2024), the official national list of threatened species by MMA (2022), terrestrial vertebrate data from Vieira-Alencar et al. (2025), freshwater fish data from Lima and Ribeiro (2011), and invertebrate data from Embrapa (2023). Figure design: Walisson Kenedy-Siqueira.
Cerrado’s water crisis
The environmental crisis in the Cerrado is also a “silent water crisis” that threatens Brazil’s national security. The Ecodomain sustains the country’s main watersheds and major aquifers, yet this balance is being disrupted by irrigated agriculture, agrochemical contamination, and dam construction. Excessive surface and groundwater withdrawal is already leading to reduced river flows and the degradation of Veredas, which are essential for water regulation.
Paradoxically, the very sectors that drive this degradation, such as agribusiness and energy production, are the most dependent on these water resources, creating a cycle of increasing water insecurity. Protecting the Cerrado’s riparian zones and aquifers is no longer just an environmental concern but a prerequisite for the survival of the regional economy and climate resilience.
Disconnect between law and reality
The Cerrado is facing a dangerous disconnect between environmental law and ecological reality. Our research reveals that current protection is startlingly thin: while we cataloged 706 Conservation Units, they cover only 8% of the Ecodomain, with less than3% under strict protection.
To assist researchers and policymakers, we have compiled an unprecedented dataset of these units, including the often overlooked Private Natural Heritage Reserves (RPPNs) and crucial ecotones, available at: https://doi.org/10.3897/natureconservation.61.168273.suppl1.
However, data alone isn’t enough. The Brazilian Forest Code, specifically the 20% Reserva Legal (RL) and the narrow 30-meter Áreas de Preservação Permanent (APPs) are ecologically insufficient. These leave vital formations like Veredas and Campos Rupestres as isolated, vulnerable fragments.
To prevent ecosystem collapse and secure Brazil’s water supply, we advocate for urgent reforms: increasing RL requirements to at least 35%, expanding protection zones to reflect biological reality, and enforcing strict traceability to decouple agricultural production from habitat loss.
Recognition and protection of Indigenous lands
Kayapó people from the state of Pará. Their lands are located in the Amazon, but include a Cerrado enclave, which is shown in the review. Photo credit to: Adriano Adriano Jerozolimski
Beyond legal designations, we emphasize that the future of the Cerrado depends on recognizing the rights of Indigenous peoples, whose traditional knowledge and sustainable land management have maintained the ecosystem’s balance for millennia.
For instance, recent laws such as the Marco Temporal and agribusiness proposals threaten to reduce their territories and accelerate biodiversity loss, making it urgent to protect and fully recognize these lands to conserve the Cerrado and its ecological resilience.
Mobilizing knowledge and adding value
Effective conservation requires recognizing the Cerrado as a biodiversity hotspot with dedicated legal instruments capable of protecting its full ecological heterogeneity.
Moving forward, the extractive logic of the past must be replaced with with regenerative systems, prioritizing conservation, restoration, and biodiversity-based economic alternatives, including agroforestry, payments for ecosystem services, fiscal incentives such as ICMS Ecológico. Ultimately, these measures will help promote conservation, social justice and sustainable certifications that recognize the Cerrado’s biodiversity as a core economic asset
Original publicaiton:
Pereira, C.C., Walisson Kenedy-Siqueira, Maia, L.R., da, V., Arantes-Garcia, L., Fernandes, S., França, G., Carvalho, G., Rodrigues, J., Salm, R. and Fearnside, P.M. (2026). The Cerrado crisis review: highlighting threats and providing future pathways to save Brazil’s biodiversity hotspot. Nature Conservation, 61, pp.29–70. doi: https://doi.org/10.3897/natureconservation.61.168273
Continuing its tradition, Pensoft Publishers honors its authors and editors with awards for the most cited 3-year-old articles and the most active editors of 2025.
As per tradition, every January we at Pensoft Publishers celebrate the achievements of our authors and editors through our annual award initiative, which spotlights the most cited articles from several flagship journals and recognizes some of our most dedicated editors.
Traditionally, the award is presented in two categories:
Leading authors of the three most cited 3-year-old scientific articles.
The three editors, who have demonstrated the highest level of activity over 2025.
This year, our open-access journals participating in the awards are:
Found on Bluesky, X and Facebook, this journal is designated to accelerate data-rich publications and innovative formats that make biodiversity information easier to discover, reuse, and integrate.
The most impactful papers of 2022 for Biodiversity Data Journal are:
An updated checklist of Azorean arthropods (Arthropoda) (2022). Authored by Borges PAV, Lamelas-Lopez L, Andrade R, Lhoumeau S, Vieira V, Soares AO, Borges I, Boieiro M, Cardoso P, Crespo LCF, Karsholt O, Schülke M, Serrano ARM, Quartau JA, Assing V.
We would also like to extend our sincere gratitude to our editorial team for their commitment throughout 2025. This year, we are proud to recognize the journal’s three most prolific contributors:
Open-access scientific journal that is internationally recognized as a leading outlet for describing new animal species and advancing modern, data-driven zoological taxonomy. Found on Bluesky, X and Facebook.
The most impactful papers of 2022 for ZooKeys are:
Catalogue of the Diptera (Insecta) of Morocco—an annotated checklist, with distributions and a bibliography(2022). By Kettani K, Ebejer MJ, Ackland DM, Bächli G, Barraclough D, Barták M, Carles-Tolrá M, Černý M, Cerretti P, Chandler P, Dakki M, Daugeron C, De Jong H, Dils J, Disney H, Droz B, Evenhuis N, Gatt P, Graciolli G, Grichanov IY, Haenni J-P, Hauser M, Himmi O, MacGowan I, Mathieu B, Mouna M, Munari L, Nartshuk EP, Negrobov OP, Oosterbroek P, Pape T, Pont AC, Popov GV, Rognes K, Skuhravá M, Skuhravý V, Speight M, Tomasovic G, Trari B, Tschorsnig H-P, Vala J-C, von Tschirnhaus M, Wagner R, Whitmore D, Woźnica AJ, Zatwarnicki T, Zwick P.
Benthic megafauna of the western Clarion-Clipperton Zone, Pacific Ocean (2022). Authored by Bribiesca-Contreras G, Dahlgren TG, Amon DJ, Cairns S, Drennan R, Durden JM, Eléaume MP, Hosie AM, Kremenetskaia A, McQuaid K, O’Hara TD, Rabone M, Simon-Lledó E, Smith CR, Watling L, Wiklund H, Glover AG.
We are also delighted to award the three editors who have completed the highest number of editorial tasks over the past year.
A key open-access journal for documenting fungal diversity worldwide and promoting modern mycological research and taxonomy. It can be found on Bluesky, X and Facebook.
PhytoKeys plays a central role in publishing research on global plant diversity and supporting cutting-edge research in plant systematics and evolution. Found on Bluesky, X and Facebook.
We would also like to acknowledge the dedication of our editors in 2025. The three most active editors receiving this year’s recognition are:
Lorenzo Peruzzi
Blanca León
Alexander Sennikov
On behalf of the journals’ publisher, Pensoft, we wish to thank ALL authors, editors, reviewers and readers for their continued support and engagement.
We once again invite our readers to celebrate these contributions and to engage with the featured articles and editor profiles, recognizing the collective effort that supports high-quality, open-access scholarly publishing.
Found on Bluesky and Facebook, this is journal with a vast scope covering all aspects of nature conservation and integrating research on the ecological, evolutionary, economic, and social dimensions of conservation management.
The most impactful papers of 2022 for Nature Conservation are:
