Category: Nature Conservation

Forgotten species: the crucial role of taxonomy and natural history collections in saving lost biodiversity

As a growing number of species face extinction, both researchers and the general public tend to focus on attractive, well-known and charismatic fauna and flora. But what about the species that have disappeared from scientific recognition altogether? 

Research published in our open-access journal Nature Conservation sheds light on how historic taxonomic errors and misinterpretations have led to the disappearance of many species from science’s radar, highlighting the crucial role that  taxonomy and natural history collections (NHCs) can play in rediscovering and conserving biodiversity.

Research paper: ‘Lost species, neglected taxonomy, and the role of natural history collections and synonymization in the identification of the World’s forgotten biodiversity’ by Spartaco Gippoliti, Simone Farina and Franco Andreone. 

Forgotten species and taxonomic inertia

Many species that were described long ago have been overlooked due to erroneous synonymisation, a process whereby one species is mistakenly classified under another’s name, generally because of the scarce number of specimens available. These species, the authors now refer to as ‘long-lost synonymised species,’ can fall out of awareness for decades, even centuries. 

The 20th century saw a general trend of ‘lumping’ species together, reducing the number of recognised taxa, especially within well-known vertebrate groups. Taxonomic inertia – the persistence of outdated classifications – has caused many species to remain under-recognised, with their conservation statuses too often overlooked. This problem is described among better-known vertebrates, but is also likely present in some of the best studied invertebrates.

The importance of natural history collections

More than simply relics of the past, natural history collections provide a contemporary and essential resource for taxonomists working to untangle these historical errors. Museum specimens allow scientists to re-examine old classifications, using modern tools and methods to correct mistakes and uncover new taxa. Recent advances in ‘museomics’ – the study of genetic material from museum specimens – have opened new possibilities for species identification and conservation.

A 'Geoffroy's cat' laying in grass.
Leopardus geoffroyi. Credit: diegocarau via iNaturalist.

Such breakthroughs have led to the revalidation of the Neotropical genus Leopardus and the African wolf, Canis anthus, which had been synonymised for decades. Without natural history collections and the associated holotypes, the nomenclature of these species might have remained obscured, and their conservation needs unmet or delayed.

Natural History Collections and Museomics

Pensoft recently launched a new journal titled Natural History Collections and Museomics (NHCM).The publication comes at a pivotal moment in which taxonomists face the challenges of dwindling resources and fewer scientists entering the field. Through the publication of important open-access research, the journal aims to play a crucial role in bridging the gap between traditional taxonomy and modern conservation efforts. 

New Diamond OA journal Natural History Collections and Museomics launches on ARPHA Platform

Furthermore, by highlighting the essential role of taxonomy and natural history collections, NHCM will support the rediscovery of species long lost to science and help to conserve the world’s forgotten biodiversity. As the field of museomics grows, so too does the hope of rediscovering species that have been hidden in plain sight. The new journal already benefits from a competent and varied editorial board, including two of the authors of the Nature Conservation paper, Franco Andreone and Spartaco Gippoliti.

If the scientific community rally behind taxonomy and natural history collections, ensuring these vital tools are integrated into future biodiversity assessments, we can hope to preserve not just the species we know, but those we have forgotten.

Original source:

Gippoliti S, Farina S, Andreone F (2024) Lost species, neglected taxonomy, and the role of natural history collections and synonymization in the identification of the World’s forgotten biodiversity. Nature Conservation 56: 119-126. https://doi.org/10.3897/natureconservation.56.132036

Innovative tools for science communication: How to increase your research impact

At the 5th ESP Europe conference in Wageningen, Pensoft will lead a training session on effective science communication through open access publishing.

The Ecosystem Services Partnership (ESP) is a global network that connects ecosystem services scientists, practitioners, stakeholders, and policymakers at local, national, regional, and global scales. ESP enhances and encourages a diversity of approaches, while reducing unnecessary duplication of effort in the development of concepts and application of ecosystem services.

Starting in 2008, ESP organises annual international conferences, where experts share research progress and exchange ideas in the field of ecosystem services, strengthening cooperation among scientists and practitioners. Since 2015, global and regional conferences started taking place bi-annually, with the 5th ESP Europe conference taking place this year between 18 and 22 November in Wageningen, The Netherlands, under the theme ‘Ecosystem Services: One Planet, One Health’.

The ESP Europe conference will focus on the question of how the ecosystem services concept can address the challenges involved in delivering the global vision of One Health. It will also highlight the interdependence of health across various domains – human, animal, plant, and ecosystem health, and the health of the global environment.

In addition to the main event, the organisers are providing access to pre-conference trainings on Sunday, 17 November, one day before the official start of the conference. One of these focuses on science communication and its role in enhancing research impact. Titled “Innovative tools for science communication: How to increase your research impact”, this session will be hosted by Pensoft Publishers.

A communication and dissemination leader in a wide range of EU research projects, as well as an independent publishing company, Pensoft will introduce the participants to best practices in science communication, drawing examples from a project portfolio which covers ecosystems and biodiversity, agriculture and forestry, pollinators and more. This training activity will also highlight the integral role of open science in effective dissemination, showcasing the opportunities facilitated by Pensoft’s open-access journals, which promoting transparency, accessibility, and reusability of results. Overall, the session will provide an in-depth look into the interlinkage between effectively communicated research outputs and the benefits of openly published data.

The Pensoft team will share their experiences with projects such as  SELINA and SpongeBoost, both of which will also be presented in the scientific sessions and via a shared booth at the event.

Everyone who has already registered for the official programme can still add a training to their application using this link.

Orthoptera and origami: Pensoft at the International Congress of Entomology

Meeting our authors in person was a chance for us to gather valuable feedback and make sure we are doing our best.

The International Congress of Entomology 2024 (ICE2024), which took place on August 25-30 2024 in Kyoto, Japan, was arguably the biggest entomology event of the year. For the Pensoft team, it was an excellent chance to catch up with our authors and editors and discuss new partnerships.

At the Kyoto International Conference Center, entomologists visited lectures, symposia, and poster presentations, but they also enjoyed insect-themed haikus, origami, and artworks, and got to sample some edible insects.

Meeting our authors in person was a chance for us to gather valuable feedback and make sure we are doing our best to provide entomologists with a frictionless process that makes their published research shine.

  • Robin Kundrata, author in ZooKeys
  • Deepa Pureswaran, author and editor in NeoBiota
  • Alain Roques, author and editor in NeoBiota
  • Jessica Gillung, author in ZooKeys
  • Ranjith AP, editor in Check List and author in ZooKeys and Journal of Hymenoptera Research
  • Minoo Heidari Latibari, author in ZooKeys
  • Elisabeth Geiser, author in ZooKeys
  • Sven Bradler, author and editor in ZooKeys
  • Showtaro Kakizoe, author in ZooKeys
  • Antonio Carapelli, author and reviewer in ZooKeys

At Stand 25, congress participants browsed the company’s open-access entomological journals, including ZooKeys, Biodiversity Data Journal, and Deutsche Entomologische Zeitschrift, as well as its wide range of books on insect diversity, systematics, and ecology.

Scientific illustrator Denitsa Peneva’s beautiful works adorned Pensoft’s stand; Mostafa Ghafouri Moghaddam, subject editor at ZooKeys and Biodiversity Data Journal and author at a number of Pensoft-published journals even got to take one of her prints home after winning a raffle that Pensoft organised. He won a beautiful illustration of Bombus fragrans on Trifolium pratense.

Pensoft’s founder and CEO and one of the founding editors of the company’s flagship journal ZooKeys, Prof. Lyubomir Penev, was there representing the company and meeting with fellow entomologists.

  • Prof. Penev with Evgeny Zakharov of the Centre for Biodiversity Genomics
  • Prof. Penev with researchers Jadranka Rota, Niklas Wahlberg, Alexander Konstantinov, and Michael Schmidt
  • Prof. Penev with researcher Caroline S. Chaboo

They also got the chance to learn about the ARPHA Platform, a next-generation publishing solution that offers a streamlined and efficient workflow for authors, reviewers, and editors.

ARPHA Platform’s 15 top features enjoyed by client journals and publishers

At ICE2024, Pensoft also presented its newest open-access jorunal, Natural History Collections and Museomics. A peer-reviewed journal for research, discussion and innovation of natural history collections, NHCM will publish under a diamond open access model, allowing free access to published content without any fees for authors or readers.

New Diamond OA journal Natural History Collections and Museomics launches on ARPHA Platform

In addition to its publishing endeavors, Pensoft also presented some of the EU-funded pollinator projects that it takes part in such as Safeguard, PollinERA, and WildPosh.

ICE2024 was a chance to advance entomological science and foster collaboration within the global scientific community. For those who missed the chance to connect with Pensoft in Kyoto, the company’s journals and platforms remain accessible online, offering opportunities to read and produce groundbreaking research in insect diversity and ecology.

Uniting to advance amphibian and reptile conservation: the 10th World Congress of Herpetology

At the event, the Pensoft team met up with authors and editors, showcased its new communication materials, and sponsored a Best Talk award.

The 10th World Congress of Herpetology (WCH) took place on August 5-9, 2024, in Kuching, Malaysia. Maria Kolesnikova, Pensoft’s marketing and sales manager, attended the event, connecting with many current and prospective authors and editors at Pensoft journals.

Maria Kolesnikova standing at Pensoft's booth.

Throughout the congress, our stand attracted numerous visitors, including many editors of our journals, such as Herpetozoa and ZooKeys. The opportunity to connect with our editors in person was invaluable, reinforcing the collaborative spirit that drives our publishing efforts. In addition, many of the authors in our journal visited the Pensoft stand to see their papers in print.

  • Bibiana Rojas, subject editor at Herpetozoa
  • Luciano Javier Avila, subject editor at Biodiversity Data Journal
  • Luis Ceríaco, author and editor at ZooKeys
  • Anthony Herrel, subject editor at ZooKeys
  • Mao-Liang Li, author at Herpetozoa
  • Ilse K. Barraza-Soltero, author at ZooKeys, Herpetozoa, and Check List
  • Artem Lisachov, subject editor at Comparative Cytogenetics and author at Biodiversity Data Journal and Herpetozoa

Many of our editors participated actively in the congress, delivering talks that highlighted cutting-edge research in herpetology.

Luis Ceríaco, author and editor at ZooKeys, presented a talk called “The herpetological results of Alexandre Rodrigues Ferreira’s ‘Philosophical Voyage’ to Brazil (1783–1792)”, where he talked about a huge expedition to explore the Amazon and Cueva rivers.

Umilaela Arifin, subject editor at Zoosystematics and Evolution, delivered a presentation called, “Hang’in there! Toward stabilising phylogeny of Asian ranids with gastromyz ophorous tadpoles,” where she talked about Sumaterana, a new genus that has been identified with gastromyz tadpoles in Sumatra.

Ben Wielstra, subject editor at Herpetozoa, presented to a fully packed hall on the balanced lethal system in Triturus newts.

Hanh Thi Ngo, author at Nature Conservation, gave a talk called “Diversity of karst – adapted bent-toed geckos in Laos and Vietnam.” Karst diversity is in great danger because of human activities in Vietnam, she said. There are publications on this topic in ZK & Nature Conservation by Hanh and Ziegler.

Scientific illustrator Denitsa Peneva has designed Pensoft’s new communication materials, centered around rich, colourful illustrations of species that have been featured in Pensoft’s journals.

Swati Nawani, doctoral researcher at the Wildlife Institute of India, won one of Denitsa’s amazing scientific illustration prints as part of a raffle organised by Pensoft. Swati has researched Himalayan amphibians since 2018.

In a commitment to support and celebrate excellence in herpetological research, Pensoft sponsored the Best reptile conservation talk award. For her talk, “Heat water and reptiles – do the hydro-thermal properties of animals at the source location persist at the translocation site?,” Deanne Trewartha won a free publication in either Herpetozoa or Nature Conservation, as well as another beautiful print by Denitsa Peneva.

The award presentation was a moment of celebration, and we are delighted to support the work of such inspiring researchers.

For Pensoft, the 10th World Congress of Herpetology was a chance to connect with our authors and editors and engage with the global herpetology community. Inspired by all the quality research presented there, we look forward to the next Herpetology Congress – and until then, we will continue publishing and promoting outstanding scientific work.

Eight years of ruin: the legacy of the Mariana dam disaster

Researchers explore the ongoing devastation caused by Brazil’s worst environmental disaster.

Eight years since the collapse of the Fundão tailings dam in Mariana, Brazil, researchers have highlighted ongoing environmental and social devastation caused by the disaster.

A paper published in our open-access journal Nature Conservation underscores the persistent and growing impacts of the collapse, which ranks as one of the world’s most significant environmental tragedies.

Several dead fish on a muddy river bank with a forest in the background.
Dead fish in Marliéria, Minas Gerais, Brazil, about 200 km downstream from the Fundão tailings dam. Photo credit: Elvira Nascimento.

Caused by the Samarco mining company, the 2015 collapse released approximately 50 million cubic meters of toxic mud, burying the village of Bento Rodrigues and severely contaminating over 600 kilometres of river channels and coastal habitats. More than 1 million people across 35 cities were affected, leading to 19 deaths, widespread health issues, and the displacement of hundreds of residents.

A village, destroyed by the Mariana dam disaster, covered in mud.
The village of Bento Rodrigues after the disaster. Photo credit: Rogério Alves/TV Senado.

According to researchers, the environmental damage has only intensified over the years. High levels of heavy metals continue to threaten human and wildlife health, with significant bioaccumulation observed in endangered species like the Franciscana dolphin. Additionally, the disaster caused the introduction of numerous invasive species, further destabilising the ecosystem.

The paper, led by Dr Cássio Cardoso Pereira and Fernando Goulart of Universidade Federal de Minas Gerais, criticises the slow and controversial response by the Renova Foundation, an entity created by the responsible companies to address the disaster’s aftermath. While some compensation and restoration efforts have been made, the researchers argue that these actions are insufficient and often inadequate.

A Brief History of: The Mariana Disaster by Plainly Difficult.

One of the most concerning findings, they say, is the ongoing risk posed by similar structures across Brazil, where hundreds of dams remain in poor condition. The study advocates for the replacement of these dangerous dams with safer alternatives like dry mining, which significantly reduces the risk of future collapses.

“Urgent, science-based public policies are needed that prioritise the restoration of the Rio Doce basin, in addition to comprehensive compensation for affected communities. To achieve this, we need collaborations involving local and government oversight and independent scientific expertise to prevent further ecological and human disasters.”

Dr Cássio Cardoso Pereira.
Has climate change hijacked the environmental agenda?
Read a guest blog post by Dr Cássio Cardoso Pereira exploring whether biodiversity loss is being overlooked because of climate change.

As the region continues to face the compounded effects of climate change, with increasing cyclones and heavy rains worsening the spread of pollutants, the paper reminds us that the legacy of the Fundão disaster is far from over.

Original source

Pereira CC, Fernandes S, Fernandes GW, Goulart FF (2024) Eight years after the Fundão tailings dam collapse: chaos on the muddy banks. Nature Conservation 56: 77-82. https://doi.org/10.3897/natureconservation.56.133441

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Starved and hunted: the cruel reality of lion farming in South Africa revealed

Whistleblowers have exposed the controversial industry fuelling the illegal international trade of big cat bones.

South Africa’s lion farming industry is rife with cruelty and is fuelling the illegal international trade of big cat bones, according to a new research paper published in the scientific journal Nature Conservation.

The study by World Animal Protection is based on direct interviews with whistleblowing workers at two closed-access lion facilities in South Africa’s North West Province.

According to the report, legal activities such as commercial captive lion breeding and canned hunting – the hunting of captive-bred wild animals in small, fenced enclosures with no chance of escape – are being used to mask involvement in the illegal international trade of lion and tiger bones.

Four young lions behind a fence.
Lions at a commercial breeding facility in South Africa (not from the study).

Several animal welfare violations were also reported, including malnutrition, lack of clean water, filthy enclosures and animals being deliberately starved throughout the low-hunting season.

Illegal hunting practices abound, including animals being drugged and hunted within an hour of release in enclosures that violate legal minimum size requirements.

Finally, the whistleblowers reported hazardous conditions for workers at the facilities, and suggested there may be shifts towards commercial exploitation of other felid species like tigers which could be used as substitutes in the bone trade.

It is estimated that between 8,000-12,000 lions and other big cats, including tigers, are bred and kept in captivity in more than 350 facilities across the country. To evade detection during professional inspections, farm owners use various strategies, such as security cameras, patrols, and messaging apps.

“Our study highlights the troubling reality of South Africa’s captive lion industry. Legal activities are being exploited to facilitate illegal trade, and this is compounded by serious animal welfare violations and unsafe conditions for workers. Urgent action is needed to protect lions and people.”

Lead researcher Dr Angie Elwin, Research Manager at World Animal Protection.

Although the commercial captive breeding and canned hunting of lions remains legal, though poorly regulated in South Africa, the export of lion skeletons – including claws and teeth – was declared unconstitutional by the South African High Court in 2019.

In 2021, the South African Government announced its intention to immediately halt the “domestication and exploitation of lions, and to ultimately close all captive lion facilities in South Africa”.

However, a lack of enforcement of regulations and clarity on the future of the industry, has left a legal grey area, enabling some farms to operate what on the surface appear to be legitimate captive breeding and ‘canned’ trophy hunting businesses – but which in reality supply the illegal international big cat bone trade facilitated by organised crime gangs.

In light of these revelations, the study calls for the South African Government to implement a comprehensive and well-managed plan to transition away from current practices in the captive lion industry. Key recommendations include:

  • Full Audit of the Industry: To ensure all commercial captive lion farms are officially registered and compliant with regulations until the industry is phased out.
  • Breeding Moratorium: Establishment of an immediate moratorium on breeding to prevent further growth of the commercial captive lion population.
  • Prevention of Bone Stockpiling: Development and enforcement of plans to prevent the accumulation of lion bones, which risks fuelling the illegal international lion bone trade.
  • Phase out Plan: Enactment of a time-bound strategic plan to phase out the captive lion farming industry, ensuring ethical treatment of animals and safety for workers.

“The South African Government must take immediate action to fulfil its public pledge to end the controversial captive lion industry. Without a comprehensive time-bound plan and stringent enforcement, this commercial industry will continue to pose significant legal, animal cruelty, and conservation concerns.”

Senior researcher Dr Neil D’Cruze, Head of Wildlife Research at World Animal Protection.
Fraudulent microchip use and compliance issues found on controversial lion farms in the Free State, South Africa

This study serves as a crucial call to action for both the South African Government and the international community to address and resolve the complex issues surrounding the captive lion industry.

The publication comes at a time when South African NGO Blood Lions encourages the public to raise their voice by sharing the 2024 World Lion Day “You’re killing them softly” campaign message, aimed at informing tourists and visitors to lion farms about the hidden suffering and cruelty involved, and to sign this petition urging the South African government among others to extend the ban on captive lion breeding and trading to other predators.

Original source:

Elwin A, Asfaw E, D’Cruze N (2024) Under the lion’s paw: lion farming in South Africa and the illegal international bone trade. Nature Conservation 56: 1–17. https://doi.org/10.3897/natureconservation.56.124555

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Plants, prizes and paella: Pensoft at the International Botanical Congress 2024

Held every six years, the world’s largest botany event hosted thousands of researchers and enthusiasts in Madrid, Spain.

Towards the end of July 2024, members of the Pensoft team travelled to Madrid for the XX International Botanical Congress, where an estimated 3,000 botanists gathered for the biggest event of the year.

Held once every six years, the congress has enlarged its scope over more than a century to become an integrated forum for knowledge on the plant and mycological world.

Proceedings kicked off with a fantastic lecture from PhytoKeys Editor-in-Chief Sandy Knapp titled, “Why botany? Why now?” The following day, Thorsten Lumbsch, Editor-in-Chief of MycoKeys, gave a keynote lecture titled, “Unravelling diversity and evolution of lichens in the genomic era.”

In fact, many authors, editors and readers of Pensoft’s journals were in attendance. And several gave presentations, including a plenary talk by renowned PhytoKeys editor, Pamela S. Soltis, on the changing face of herbarium collections.

Pensoft and PhytoKeys stand at the International Botany Congress.
Denitsa Peneva greeting researchers at the Pensoft stand.
A man giving a presentation at the Pensoft and PhytoKeys stand at the International Botany Congress.
Lyubomir Penev giving a presentation to PhytoKeys editor.

The Pensoft team welcomed attendees with a bespoke stand, complete with print copies, illustrations and various promotional materials depicting beautiful species featured in PhytoKeys.

Lyubomir Penev, founder of Pensoft and founding editor of PhytoKeys, hosted a gathering of PhytoKeys editors at the stand, where he presented the story, latest results and highlights of the journal.

A woman posing with a PhytoKeys journal at the Pensoft and PhytoKeys stand at the International Botany Congress.
Two men posing at the Pensoft and PhytoKeys stand at the International Botany Congress.
A man and a woman posing at the Pensoft and PhytoKeys stand at the International Botany Congress.
Researchers who found their publications on display at the Pensoft stand.

The congress included numerous lectures, symposia sessions, workshops and meetings across a variety of subject matters, all of which can be found on the IBC 2024 website. The major topics of the event were:

  • Systematics, phylogenetics, biogeography and evolution
  • Ecology, environment and global change, including invasive species and plant-animal interactions
  • Biodiversity and conservation
  • Structure, physiology and development, including Evo-Devo
  • Genetics, genomics and bioinformatics
  • Plants and Society

At the closing ceremony, multiple awards were presented, including Pensoft’s Early Career Researcher Talk Award. Sandy Knapp presented the award to Sonia Molino for her talk on a global study of the genus Parablechnum, a lineage of ferns of the family Blechnaceae. The award grants her a free publication in PhytoKeys. 

Describing her study, Sofia Molino said: “To date there has been no study that takes into account all the centres of diversity of the genus at the same time, and what we have found is that it has a very complex evolutionary history, with several cases of cryptic diversity, hybridisation and rapid radiation.”

On her plans to use her free publication for a pending study on a series of novelties within Parablechnum in Bolivia, she added: “Although this is probably the country in South America where Parablechnum has been studied the most, after one expedition we have still found a lot of new things, such as several undescribed species, hybrids and new localities of some species that were only known from type material.”

The next International Botanical Congress is in 2029 and will take place in South Africa, where the Pensoft team looks forward to seeing plenty of new faces and old friends!

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Pensoft at the 7th European Congress of Conservation Biology as a publisher and Horizon project partner

At the Pensoft’s stand, delegates learned about the scientific publisher’s versatile open-access journal portfolio, as well as related publishing services and the Horizon project where Pensoft is a partner.

Between 17th and 22nd June 2024, Pensoft’s scholarly publishing and project teams joined the European Congress of Conservation Biology (ECCB), organised by the Society for Conservation Biology and hosted by the University of Bologna.

Here’s a fun fact: the University of Bologna is the oldest one still in operation in the world. It is also etched in history for being the first institution to award degrees of higher learning.  

This year, the annual event themed “Biodiversity positive by 2030” took place in the stunning Italian city of Bologna famous for its historical and cultural heritage, in a way building a bridge between the past of European civilisation and the future, which is now in our hands.

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At the Pensoft’s stand, delegates learned about the scientific publisher’s versatile open-access journal portfolio of over 30 journals covering the fields of ecology and biodiversity, as well as other related services and products offered by Pensoft, including the end-to-end full-featured scholarly publishing platform ARPHA, which hosts and powers all Pensoft journals, in addition to dozens other academic outlets owned by learned societies, natural history museums and other academic institutions.

In addition to its convenient collaborative online environment, user interface and automated export/import workflows, what ARPHA’s clients enjoy perhaps the most, are the various human-provided services that come with the platform, including graphic and web design, assistance in journal indexing, typesetting, copyediting and science communication.

Visitors at the stand could also be heard chatting with Pensoft’s Head of Journal development, Marketing and PR: Iva Boyadzhieva about the publisher’s innovative solutions for permanent preservation and far-reaching dissemination and communication of academic outputs that do not match the traditional research article format.

For example, the Research Ideas and Outcomes (RIO) journal was launched in 2015 by Pensoft as an open-science journal that would publish ‘unconventional’ research outputs, such as Grant proposals, Policy briefs, Project reports, Data management plans, Research ideas etc. Its project-branded open-science collections are in fact one of the Pensoft’s products that enjoys particular attention to participants in scientific projects funded by the likes of the European Commission’s Horizon programme.

Another innovation by Pensoft that easily becomes a talking point at forums like ECCB, is the ARPHA Conference Abstract (ACA) platform, which is basically a journal for conference abstracts, where abstracts are treated and published much like regular journal articles (a.k.a. ‘mini papers’) to enable permanent preservation, but also accessibility, discoverability and citability. Furthermore, ACA has been designed to act as an abstracts submission portal, where the abstracts undergo review and receive feedback before being published and indexed at dozens of relevant scientific databases.

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At ECCB 2024, our team was also happy to meet in person many authors and editors, whose work has frequented the pages of journals like Nature Conservation, Biodiversity Data Journal, ZooKeys and NeoBiota, to name a few.

On Wednesday, delegates also got a chance to hear the talk by renowned vegetation ecologist at the ZHAW Zurich University of Applied Sciences and Editor-in-Chief at the Vegetation Classification and Survey journal: Prof. Dr. Jürgen Dengler. He presented findings and conclusions concerning neophytes in Switzerland, while drawing comparisons with other European countries and regions.

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At this year’s ECCB, Pensoft took a stand as an active Horizon project participant too. At the publisher’s booth, the delegates could explore various project outputs produced within REST-COAST, SpongeBoost and BioAgora. Each of these initiatives has been selected by the European Commission to work on the mitigation of biodiversity decline, while aiming for sustainable ecosystems throughout the Old continent.

In all three projects, Pensoft is a consortium member, who contributes with expertise in science communication, dissemination, stakeholder engagement and technological development.

Coordinated by the Catalonia University of Technology UPC-BarcelonaTech and involving over 30 European institutions, REST-COAST has been working on developing tools to address key challenges to coastal ecosystems – all consequences of a long history of environmental degradation of our rivers and coasts.

Having started earlier this year, SpongeBoost is to build upon existing solutions and their large-scale implementation by implementing innovative approaches to improve the functional capacity of sponge landscapes. The project is coordinated by the Helmholtz Centre for Environmental Research (UFZ) and will be developed with the active participation of 10 partnering institutions from seven countries across Europe. 

In the meantime, since 2022, the five-year BioAgora project has been working towards setting up the Science Service for Biodiversity platform, which will turn into an efficient forum for dialogue between scientists, policy actors and other knowledge holders. BioAgora is a joint initiative, which brings together 22 partners from 13 European countries led by the Finnish Environment Institute (SYKE).

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Still, REST-COAST, SpongeBoost and BioAgora were not the only Horizon projects involving Pensoft that made an appearance at ECCB this year thanks to the Pensoft team. 

On behalf of OBSGESSION – another Horizon-funded project, Nikola Ganchev, Communications officer at Pensoft, presented a poster about the recently started project. Until the end of 2027, the OBSGESSION project, also led by the Finnish Environment Institute (SYKE) and involving a total of 12 partnering organisations, will be tasked with the integration of different biodiversity data sources, including Earth Observation, in-situ research, and ecological models. Eventually, these will all be made into a comprehensive product for biodiversity management in both terrestrial and freshwater ecosystems. 

On Tuesday evening, the CO-OP4CBD (abbreviation for Co-operation for the Convention on Biological Diversity) team: another Horizon Europe project, where Pensoft contributes with expertise in science communication and dissemination, held a workshop dedicated to what needs to be done to promote CBD activities in Central and Eastern Europe.

On the next day, scientists from the EuropaBON consortium: another project involving Pensoft that had concluded only about a month ago, held a session to report on the final conclusions from the project concerning the state and progress in biodiversity monitoring.

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You can find the detailed scientific programme of this year’s ECCB on the congress’ website. 

Use the #ECCB2024 hashtag on X (formerly Twitter) to relive highlights from the ECCB congress. 

Pensoft launches official Weibo account to expand global reach

The Pensoft team is looking forward to engaging in conversations with its Chinese authors, editors, and readers.

Scholarly publisher Pensoft is excited to announce it is now on Chinese social media platform Weibo. The move is aimed at fostering stronger connections with researchers, academics, and enthusiasts in China, which in turn will enhance the dissemination of scientific knowledge and facilitate international collaboration.

With over half a billion active users, Weibo is a powerful social media platform that combines the functionalities of microblogging and social networking. The Pensoft team is looking forward to engaging in real-time conversations with its Chinese audience, sharing insights, and receiving their feedback.

The launch coincides with the Dragon Boat Festival, a significant cultural event in China that commemorates the ancient poet Qu Yuan and symbolizes unity and teamwork. 

The move aims to make Pensoft’s publications and updates more accessible to Chinese researchers, allowing them to stay informed about the latest scientific discoveries and advancements. In addition, it offers an excellent opportunity for Pensoft to foster collaborations with Chinese institutions, researchers, and academic societies.

As a pioneer in open-access publishing, Pensoft will also use its Weibo account to promote the benefits of open access, making sure Chinese research reaches a global audience without paywalls.

“China, with its rapidly growing research output and a burgeoning community of scholars, represents a significant segment of the global academic landscape. Recognizing the importance of engaging with this vibrant community, Pensoft’s decision to establish a presence on Weibo underscores its commitment to inclusivity and accessibility in scientific publishing,” says Lyubomir Penev, CEO and founder of Pensoft.

We invite you to join Pensoft’s Weibo account to learn all about our latest scientific discoveries and publishing updates.

Pensoft took a BiCIKL ride to Naturalis to report on a 3-year endeavour towards FAIR data

Three years ago, the BiCIKL consortium took to traverse obstacles to wider use and adoption of FAIR and linked biodiversity data.

Leiden – also known as the ‘City of Keys’ and the ‘City of Discoveries’ – was aptly chosen to host the third Empowering Biodiversity Research (EBR III) conference. The two-day conference – this time focusing on the utilisation of biodiversity data as a vehicle for biodiversity research to reach to Policy – was held in a no less fitting locality: the Naturalis Biodiversity Center. 

On 25th and 26th March 2024, the delegates got the chance to learn more about the latest discoveries, trends and innovations from scientists, as well as various stakeholders, including representatives of policy-making bodies, research institutions and infrastructures. The conference also ran a poster session and a Biodiversity Informatics market, where scientists, research teams, project consortia, and providers of biodiversity research-related services and tools could showcase their work and meet like-minded professionals.

BiCIKL stops at the Naturalis Biodiversity Center

The main outcome of the BiCIKL project: the Biodiversity Knowledge Hub, a one-stop knowledge portal to interlinked and machine-readable FAIR data.

The famous for its bicycle friendliness country also made a suitable stop for BiCIKL (an acronym for the Biodiversity Community Integrated Knowledge Library): a project funded under the European Commission’s Horizon 2020 programme that aimed at triggering a culture change in the way users access, (re)use, publish and share biodiversity data. To do this, the BiCIKL consortium set off on a 3-year journey to build on the existing biodiversity data infrastructures, workflows, standards and the linkages between them.

Many of the people who have been involved in the project over the last three years could be seen all around the beautiful venue. Above all, Naturalis is itself one of the partnering institutions at BiCIKL. Then, on Tuesday, on behalf of the BiCIKL consortium and the project’s coordinator: the scientific publisher and technology innovator: Pensoft, Iva Boyadzhieva presented the work done within the project one month ahead of its official conclusion at the end of April.

As she talked about the way the BiCIKL consortium took to traverse obstacles to wider use and adoption of FAIR and linked biodiversity data, she focused on BiCIKL’s main outcome: the Biodiversity Knowledge Hub (BKH).

Key results from the BiCIKL project three years into its existence presented by Pensoft’s Iva Boyadzhieva at the EBR III conference.

Intended to act as a knowledge broker for users who wish to navigate and access sources of open and FAIR biodiversity data, guidelines, tools and services, in practicality, the BKH is a one-stop portal for understanding the complex but increasingly interconnected landscape of biodiversity research infrastructures in Europe and beyond. It collates information, guidelines, recommendations and best practices in usage of FAIR and linked biodiversity data, as well as a continuously expanded catalogue of compliant relevant services and tools.

At the core of the BKH is the FAIR Data Place (FDP), where users can familiarise themselves with each of the participating biodiversity infrastructures and network organisations, and also learn about the specific services they provide. There, anyone can explore various biodiversity data tools and services by browsing by their main data type, e.g. specimens, sequences, taxon names, literature.

While the project might be coming to an end, she pointed out, the BKH is here to stay as a navigation system in a universe of interconnected biodiversity research infrastructures.

To do this, not only will the partners continue to maintain it, but it will also remain open to any research infrastructure that wishes to feature its own tools and services compliant with the linked and FAIR data requirements set by the BiCIKL consortium.

On the event’s website you can access the BiCIKL’s slides presentation as presented at the EBR III conference.

What else was on at the EBR III?

Indisputably, the ‘hot’ topics at the EBR III were the novel technologies for remote and non-invasive, yet efficient biomonitoring; the utilisation of data and other input sourced by citizen scientists; as well as leveraging different types and sources of biodiversity data, in order to better inform decision-makers, but also future-proof the scientific knowledge we have collected and generated to date.

Project’s coordinator Dr Quentin Groom presents the B-Cubed’s approach towards standardised access to biodiversity data for the use of policy-making at the EBR III conference.

Amongst the other Horizon Europe projects presented at the EBR III conference was B-Cubed (Biodiversity Building Blocks for policy). On Monday, the project’s coordinator Dr Quentin Groom (Meise Botanic Garden) familiarised the conference participants with the project, which aims to standardise access to biodiversity data, in order to empower policymakers to proactively address the impacts of biodiversity change.

You can find more about B-Cubed and Pensoft’s role in it in this blog post.

On the event’s website you can access the B-Cubed’s slides presentation as presented at the EBR III conference.

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Dr France Gerard (UK Centre for Ecology & Hydrology) talks about the challenges in using raw data – including those provided by drones – to derive habitat condition metrics.

MAMBO: another Horizon Europe project where Pensoft has been contributing with expertise in science communication, dissemination and exploitation, was also an active participant at the event. An acronym for Modern Approaches to the Monitoring of BiOdiversity, MAMBO had its own session on Tuesday morning, where Dr Vincent Kalkman (Naturalis Biodiversity Center), Dr France Gerard (UK Centre for Ecology & Hydrology) and Prof. Toke Høye (Aarhus University) each took to the stage to demonstrate how modern technology developed within the project is to improve biodiversity and habitat monitoring. Learn more about MAMBO and Pensoft’s involvement in this blog post.

MAMBO’s project coordinator Prof. Toke T. Høye talked about smarter technologies for biodiversity monitoring, including camera traps able to count insects at a particular site.

On the event’s website you can access the MAMBO’s slides presentations by Kalkman, Gerard and Høye, as presented at the EBR III conference.

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The EBR III conference also saw a presentation – albeit remote – from Prof. Dr. Florian Leese (Dean at the University of Duisburg-Essen, Germany, and Editor-in-Chief at the Metabarcoding and Metagenomics journal), where he talked about the promise, but also the challenges for DNA-based methods to empower biodiversity monitoring. 

Amongst the key tasks here, he pointed out, are the alignment of DNA-based methods with the Global Biodiversity Framework; central push and funding for standards and guidance; publication of data in portals that adhere to the best data practices and rules; and the mobilisation of existing resources such as the meteorological ones. 

Prof. Dr. Florian Leese talked about the promise, but also the challenges for DNA-based methods to empower biodiversity monitoring. He also referred to the 2022 Forum Paper: “Introducing guidelines for publishing DNA-derived occurrence data through biodiversity data platforms” by R. Henrik Nilsson et al.

He also made a reference to the Forum Paper “Introducing guidelines for publishing DNA-derived occurrence data through biodiversity data platforms” by R. Henrik Nilsson et al., where the international team provided a brief rationale and an overview of guidelines targeting the principles and approaches of exposing DNA-derived occurrence data in the context of broader biodiversity data. In the study, published in the Metabarcoding and Metagenomics journal in 2022, they also introduced a living version of these guidelines, which continues to encourage feedback and interaction as new techniques and best practices emerge.

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You can find the programme on the conference website and see highlights on the conference hashtag: #EBR2024.

Don’t forget to also explore the Biodiversity Knowledge Hub for yourself at: https://biodiversityknowledgehub.eu/