Author: Pensoft Editorial Team

Plants helping human parasites, roads as weed highways, and chemical warfare between alien and native plants – these are only some of the topics covered in NeoBiota – a new open-access, peer-reviewed, rapid online journal in invasion biology. NeoBiota was launched by Pensoft Publishers continuing the former NeoBiota Proceedings series. The Editor-in-Chief of the new journal is Dr Ingolf Kühn from the Helmholtz Centre for Environmental Research UFZ, Halle, Germany, assisted by an authoritative Editorial Team.

The vision of the Editorial Board on the priority issues and future development of invasion biology is presented in an Editorial co-authored by many leading specialists in biological invasions and published in NeoBiota’s inaugural issue.

"There are at least three main reasons for launching a new journal on biological invasions. First, there is a need for a publication which considers introduced species irrespective of their impact, negative or positive (e.g., planned introductions of economically important species); second, a journal is required that publishes the results of close interdisciplinary research; and third, provides the first solely open access publication dealing specifically with biological invasions." said Dr Kühn.

NeoBiota will pay special attention to increasing public awareness of the challenges posed by biological invasions through an established system of press releases targeted at other publishers, mass media, science and general blogs and social networks amongst others.

"The rate and scale with which biological invasions happen nowadays are unprecedented. It is truly exciting to have a journal that will address these challenges through rapid online open-access using the innovative publishing and dissemination methods already in place in other Pensoft’s journals." commented Dr Tom Stohlgren from the US Geologial Survey, Fort Collins. "The ‘journals of the future’ should be types of social networks, serving the interested community and reaching out to a wider audience, providing barrier-free, rapid and concise information, as well as access to underlying data. Surely, a crucial set of features for studying and managing biological invasions!" added Dr Stohlgren.

The journal provides automated cross-linking through the innovative Pensoft Taxon Profile tool revealing all taxa published. This includes the world’s leading indexing and aggregation biodiversity platforms, such as the Global Biodiversity Information Facility (GBIF), Encyclopedia of Life (EOL), the International Plant Name Index (IPNI), MycoBank, Index Fungorum, ZooBank, the National Center for Biodiversity Information (NCBI), the Biodiversity Heritage Library (BHL), the bibliographic archives PubMed, PubMedCentral, and many others. NeoBiota will provide also a strong support and cutting-edge infrastructure for open data publishing through internationally recognized data repositories, such as GBIF, Genbank, Barcode of Life, Dryad, Pangaea and others.

NeoBiota will publish minimum two more issues by the end of 2011.

Original source: Kühn I, Kowarik I, Kollmann J, Starfinger U, Bacher S, Blackburn TM, Bustamante RO, Celesti-Grapow L, Chytrý M, Colautti RI, Essl F, Foxcroft LC, Garcia-Berthou E, Gollasch S, Hierro J, Hufbauer RA, Hulme PE, Jarošik V, Jeschke JM, Karrer G, Mack RN, Molofsky J, Murray BR, Nentwig W, Osborne B, Pyšek P, Rabitsch W, Rejmánek M, Roques A, Shaw R, Sol D, Vilà M, van Kleunen M, von der Lippe M, Wolfe LM, Penev L (2011) Open minded and open access: introducing NeoBiota, a new peer-reviewed journal of biological invasions. NeoBiota 9: 1-11. doi: 10.3897/NeoBiota.9.1835

A pearl-flowered legume collected in 2005 by Ralph Clark & Nigel Barker (Rhodes University) in the Sneeuberg, South Africa, was determined by taxonomists Charles Stirton & Muthama Muasya (University of Cape Town) to be a distinct new species. Psoralea margaretiflora is the latest endemic species from the Sneeuberg Centre of Floristic Endemism. The discovery highlights the importance of the poorly explored Great Escarpment in South Africa. The study was published in the open access journal PhytoKeys.

The Sneeuberg Centre of Floristic Endemism, Eastern Cape Province, and South Africa’s newest Centre of Endemism, was recognised by Ralph Clark, Nigel Barker and Laco Mucina as recently as 2009 (Clark, V.R., Barker, N.P. & Mucina, L. 2009. The Sneeuberg: A new centre of floristic endemism on the Great Escarpment, South Africa. South African Journal of Botany 75: 196-238).

The recognition of the new Sneeuberg Centre arose out of the doctoral studies of Ralph Clark. The Great Escarpment Biodiversity Research Programme co-ordinates new research in the region and is lead by Prof. Nigel Barker at the Department of Botany, Rhodes University. The research effort is a response to the increasingly obvious lack of baseline biodiversity studies on the species-rich Great Escarpment in southern Africa. So far comprehensive biodiversity research work has been undertaken on the Sneeuberg, with further work currently being undertaken on the Nuweveldsberge, Roggeveldberge and Great Winterberg-Amatolas, and in future further afield in collaboration with other biodiversity scientists.

The Pearl-flowered Psoralea was one of several new species discovered on the first two botanical expeditions to the Sneeuberg by Rhodes University in the 2005-2006 summer season. It is one of 27 endemic species confined to these remote mountains. Many of these endemics have only recently been discovered, and some have very restricted distributions. Ralph Clark is collaborating with taxonomic experts from around the world to ensure that these new species are described and recognised in a reasonable time frame so that their conservation can be ensured.

Charles Stirton, an expert on the genus Psoralea, was one of several biodiversity scientists on a biodiversity blitz of the poorly-studied Kamdeboorge in January 2011 (organised by the Southern African Society for Systematic Biology as their Post-Congress Tour). He was able to see Psoralea margaretiflora in the field and confirm its status as a new species. Material collected on this expedition was used during the expedition to draft the technical details needed for the species’ description and publication.

Original Source: Stirton CH, Clark VR, Barker NP, Muasya AM (2011) Psoralea margaretiflora (Psoraleeae, Fabaceae): A new species from the Sneeuberg Centre of Floristic Endemism, Eastern Cape, South Africa. PhytoKeys 5: 31–38. doi: 10.3897/phytokeys.5.1585

Read the paper here.

Molecular data have shown that three Australian Cucurbitaceae species initially collected in 1856 but never accepted as separate species are distinct from each other and that one of them is the closest relative of the honeymelon, Cucumis melo. The names for these species are sorted out in a study published in the open access journal PhytoKeys.

Research published in the Proceedings of the National Academy of Sciences, USA (DOI: 10.1073/pnas.1005338107) last year had shown that northern Australia harbours the sister species of the honeymelon, Cucumis melo, which previously had been hypothesized to occur in Africa.  It turned out that the Australian honeymelon relative had in fact been collected and named Cucumis picrocarpus by one of the fathers of Australian botany, Ferdinand von Mueller, in 1856, but then been erroneously synonymized. The same thing happened with another of Mueller’s discoveries, this one being a species of loofah (the genus Luffa), which had was been erroneously synonymized and was then forgotten until 2011. Matters were complicated by some of Mueller’s 1856 collections arriving in the herbarium of the Royal Botanical Gardens Kew in disarray, so that two species were mounted on one and the same herbarium sheet. This naturally led to a confused idea of the morphology of the supposed species.

The researchers sorted out what is what on the Kew herbarium sheet, which then received an additional new barcode number assigned by the Kew herbarium to reflect that it carries two plant species, not just one. A high-resolution color photo of this historically interesting herbarium sheet is contained in the paper.

The study provides an example of the continuing need to link herbarium science with molecular results to sort out the names and wild relatives of economically important groups, such as melons and loofahs.

Original Source: Telford IRH, Schaefer H, Greuter W, Renner SS (2011) A new Australian species of Luffa (Cucurbitaceae) and typification of two Australian Cucumis names, all based on specimens collected by Ferdinand Mueller in 1856. PhytoKeys 5: 21–29. doi: 10.3897/phytokeys.5.1395

The Nomenclature Section of the 18th International Botanical Congress in Melbourne, in July 2011, proposed and approved sweeping changes to the way scientists name new plants, algae, and fungi. To demonstrate the efficiency of electronic publishing, the first open access plant taxonomy journal PhytoKeys published a correspondence note by a team of botanists from various USA institutions (Smithsonian Institution, The Missouri Botanical Garden, The Chicago Botanical Garden, and The Field Museum of Chicago), led by Dr James Miller from the New York Botanical Garden. The correspondence was written, submitted, edited, proofread, and published by PhytoKeys during the congress in just four days.

The changes in the International Code of Botanical Nomenclature begin on the cover of the document: the title was broadened to make explicit that the Code applies not only to plants, but also to algae and fungi. The new title is the International Code of Nomenclature for algae, fungi, and plants (ICN). In addition, for the first time in history the Code will allow for the electronic publication of names of new taxa.  In an effort to make the publication of new names more accurate and efficient, the requirement for a Latin validating diagnosis or description was changed to allow either English or Latin for these essential components of the publication of a new name.  Both of these latter changes will take effect on 1 January 2012.

The nomenclatural rules for fungi will see several important changes, the most important of which is probably the adoption of the principle of “one fungus, one name.” Paleobotanists will also see changes with the elimination of the concept of “morphotaxa” from the Code, that is the different names for one and the same species described after different parts of a fossil, should now be united under one name.

“The electronic publishing of new names will not only facilitate the taxonomists and the publishers”, said Dr W. John Kress from the Smithsonian Institution, Editor-in-Chief of PhytoKeys, “but this innovation will make the whole process of scientific discovery and description of new plants and fungi much more efficient, rapid and freely available for anyone to read and use. As natural habitats are degraded at an ever faster rate, it is crucial that botanists speed-up their work on finding and describing new species of plants before they are threatened with extinction”!

“Although the journal PhytoKeys has taken a leading role in electronic publishing of new plants while at the same time establishing an archival agreement with PubMedCentral of the National Library of Medicine of the US, we shall continue to deposit a full-color printed version of the journal in the six leading botanical libraries of the world, situated in the USA, UK, Russia, and China. Such a practice will certainly comfort those who worry about the perpetuity of electronic publications over time and will guarantee safe preservation of the published and printed information” adds Dr Lyubomir Penev, Managing Editor of PhytoKeys.

Original Source: Miller JS, Funk VA, Wagner WL, Barrie F, Hoch PC, Herendeen P (2011) Outcomes of the 2011 Botanical Nomenclature Section at the XVIII International Botanical Congress. PhytoKeys 5: 1-3. doi: 10.3897/phytokeys.5.1850

The press release on the special issue on the flora of Marquesas lslands (PhytoKeys 4) enjoyed more than 1200 visits by science journalists and media on the day we posted it! The potential number of end readers should be at a magnitude more.

Here is a Google link to see how it was reflected by media during the first day.

Our small press office is always keen to work with you on news announcements regarding your research findings published in PhytoKeys. It is important for all: for the authors, for the journal, and most importantly, for increasing public awareness of our science!

On the day when botanists decided to go for electronic publishing at the IBC2011 Melbourne, we have received a confirmation message from the National Library of Medicine of the USA, that PhytoKeys is accepted for archiving in PubMedCentral. In practice this means that all content of PhytoKeys will be archived as PDF and  XML files. In addition, all figures will be archived as separate files as well. The full text will be nicely readable on the PMC website and indexed through the huge machine of NLM, NCBI, etc.

MycoKeys – a new journal in systematic and biology of fungi (including lichens) was launched by Pensoft Publishers. The Editor-in-Chief of the new journal is Dr Thorsten Lumbsch from The Field Museum, Chicago assisted by an authoritative Editorial Team.  All content is published open access and is free to read, download, print, and distribute.

MycoKeys builds upon the success of its sister journals ZooKeys and PhytoKeys. It is more than a journal. It is a linked environment built upon its own content management software. MycoKeys offers numerous innovative ways to publish and disseminate information on the taxonomy and ecology of fungi (including lichens). The journal will provide mandatory registration of all new taxa in MycoBank. All new species will be supplied by the publisher to the Encyclopedia of Life (EOL), Globalnames, the Plazi Treatment Repository and the Wiki Species-ID on the day of publication of the article. The content of the article itself will be marked-up at the level of taxonomic descriptions, taxon names, citations and references, identification keys, georeferenced localities, and other taxon information.

MycoKeys  provides automated cross-linking through the Pensoft Taxon Profile of all taxa names mentioned on its pages with major indexing and aggregation platforms, such as the Global Biodiversity Information Facility (GBIF), Encyclopedia ofLife (EOL), the International Plant Name Index (IPNI), MycoBank, Index Fungorum, LIAS,  the National Center for Biodiversity Information (NCBI),  GenBank and Barcode of Life, the Biodiversity Heritage Library (BHL), PubMed, PubMedCentral,  Mendeley and many others.

MycoKeys  will provide a strong support and infrastructure for open data publishing, either as supplementary data and/or multimedia files or through internationally recognized indexers (GBIF) and data repositories, such as GenBank,  Barcode of Life, Dryad,  TreeBASE, Pangaea and others.

MycoKeys  will increase public awareness of science results in all aspects of mycology through its own established system of press releases and news announcements associated to published articles, to mass media, science and general blogs, social networks  and others.

"This in exciting time for systematic mycology, with rapid advances being made through molecular phylogenetic approaches, and the concomitant development of online information repositories. Increasingly effective ways of making the results of such work rapidly and widely available are required. MycoKeys is especially attractive as it provides a means of promptly disseminating substantial works with large numbers of coloured photographs at no cost to the authors. It does this with an innovative publishing approach, with fair open access policies, and most significantly a linked association with the world’s leading biodiversity platforms and databases. " said Professor David L. Hawksworth CBE, an Honorary President of the International Mycological Association.

"Undoubtedly, there is a growing need of an authoritative, cutting-edge technology journal in mycology to respond to the challenges of cybertaxonomy era and especially of the forthcoming semantic Web of linked data. The phenomenal success of ZooKeys in zoological systematics, and the excellent start of PhytoKeys in botany, on which experience MycoKeys builds upon, convinced a team of editors from leading mycological institutions to put efforts in establishing of a just new-generation mycology journal" adds Dr Thorsten Lumbsch, Editor-in-Chief of MycoKeys.

MycoKeys is published in four different formats: (1) high-resolution, full-color print version (2) PDF identical to the printed version; (3) HTML to provide links to external resources and semantic enhancements to published texts for interactive reading; (4) XML version compatible to PubMedCentral archiving and providing a machine-readable copy to facilitate future data mining. Neither restriction nor charges are imposed on the use of color illustrations.

MycoKeys will be presented at the International Botanical Congress (IBC2011, Booth No 21) in Melbourne (24-30 July 2011) and at all forthcoming international mycological congresses and conferences.  Mycologists and  lichenologists are welcome to submit manuscripts and discuss innovative publishing projects.

The Eucalantica genus belongs to the relatively primitive micro-moth group, Yponomeutidae. Six new species have been described by Mr. Jae-Cheon Sohn from the University of Maryland, College Park, USA and Mr. Kenji Nishida from Universidad de Costa Rica, San José, Costa Rica and published in the open access taxonomy journal Zookeys.
 
“Yponomeutid moths are important group in tracing the evolution of plant association in Lepidoptera. In spite of this importance, the family has been neglected by systematists and its biodiversity and phylogeny remain poorly understood” comments Mr. Sohn, Ph. D. candidate. Previous descriptive works have concentrated on the Holarctic and Australian faunas, the species diversity of yponomeutids from the Neotropics remains significantly underestimated as Eucalantica being a good example.

Eucalantica has been known by only a single Nearctic species. A review of the genus found six new species: E. costaricae, E. ehecatlella, E. icarusella, E. powelli, and E. pumila, all five from Costa Rica; E. vaquero from southern USA and Mexico. “Our discoveries suggest that a high diversity of Eucalantica occurs in the tropical highlands of Central America and the genus is more diverse and widely distributed than previously thought” adds Mr. Nishida.

The study demonstrates how poor is our knowledge on the real diversity of life on Earth. According to some estimates, only less than 20% of extant species are described. Thousands of species become extinct every year before they are named. Intensified taxonomic inventories and large-scale conservation measures may improve the situation towards more complete documentation and preservation of the wonderful world of biodiversity.

Original source: Sohn J-C, Nishida K (2011) A taxonomic review of Eucalantica Busck (Lepidoptera: Yponomeutidae) with descriptions of six new species. ZooKeys 118: 75–96. doi: 10.3897/zookeys.118.956

One of the smallest ever cave-dwelling ground beetles (Carabidae), has recently been discovered in two caves in the Rhodopi Mountains, Bulgaria, and described under the name Paralovricia beroni. The beetle is completely blind and is only 1.8-2.2 mm long. The study was published in the open access journal ZooKeys.

“When we saw this beetle for first time, it became immediately clear that it belongs to a genus and species unknown to science. Moreover, its systematic position within the family of Carabidae remained unclear for several years. After a careful study of its closest relatives Lovricia and Neolovricia, discovered in caves of the Dinaric Alps of Croatia, we came to the conclusion that all three genera  belong to a new subtribe which we describe now under the name Lovriciina”, commented Borislav Gueorguiev from the National Natural History Museum in Sofia, Bulgaria.

The species of this group are extremely rare and are known only from a few specimens. Lovricia jalzici was described in 1979 which is presently known only from a single female specimen found at the cave Gospodska pećina in Croatia;  Lovricia aenigmatica is known from one male and one female found at an unnamed pit near the peak Sveti Jure on the Biokovo Mountains and from another female from Lovrićija Jama II (Sveti Jure, Biokovo);  lastly, Neolovricia ozimei  was described also very recently (2009), and is known from one female found in the cave Špilja u Radinovcima in the Biokovo Mountains, Croatia.

The new discovery sheds light on the paleogeographic history of the Balkans. The currently known distribution of this group of beetles with common origin is widely disjointed between the Dinarides (West Balkans) to the Rhodopes (Еast Balkans).

“To explain this” – adds the lead author Pier Мauro Ciachino, from Torino, Italy –  “we must go back at least to the Late Oligocene (29-24 million years) where a continuum of land connected the Dinarides and Rhodopes mountains, allowing colonization by this phyletic lineage. Conversely, a paleogeographic event that could be placed at the origins of the separation of Paralovricia (in the Rhodopes) from a common ancestor – which then enabled a further differentiation of Lovricia and Neolovricia in the Dinarides – may be identified in the Early Miocene (20.5-19 Ma) when a strip of lowlands, covered with freshwater lakes and marshes seems to have divided the Dinarides from the Rhodopes.”

Original article:  Giachino P, Gueorguiev B, Vailati D (2011) A new remarkable subterranean beetle of the Rhodopes: Paralovricia n. gen. beroni n. sp. belonging to Lovriciina new subtribe (Coleoptera: Carabidae: Trechinae: Bembidiini). ZooKeys 117: 59-72. doi: 10.3897/zookeys.117.1612

A team of researchers from the Czech University of Life Sciences discovered four new species of jewel beetles (Buprestidae) from South-eastern Asia. This family of beetles is named for their particularly beautiful body and fascinating, shiny colours.

All new species belong to the genus Philanthaxia. Before the publication of this study, 61 species had been known from this genus. Currently, it comprises of 65 species, with a primarily Southeast-Asian distribution, except for two species extending to the Australasian region”, said Oto Nakládal, a co-author of the study.

The new species P. pseudoaenea occurs in Thailand, while P. jakli, P. chalcogenioides and P. lombokana are distributed on some Indonesian islands (Sumatra, Borneo, Lombok). The biology of all these species is unknown, just as the host plants, because all specimens were obtained from the locals.

The specialists also described sexual dimorphism of Philanthaxia iris. This species had originally been described on the basis of a single female from Java, and male specimens had not been known so far. Due to the specimen from a local collector, also from Java, it was possible to describe a male.

Inventories of biodiversity “hot-spots”, such as Southeast Asia, is extremely important because of the increasing extinction rates due to rapid changes of natural habitats. Several species become extinct before even known to science. “Mankind is not even able to evaluate the real losses associated with species extinction, because every individual species is, as a rule, a result of millions of years of evolution and adaptation and has therefore its unique role in the ecosystems” Nakládal added.

Original source: [Bílý S, Nakládal O (2011) Four new species of the genus Philanthaxia Deyrolle, 1864 from Southeast Asia and comments on P. iris Obenberger, 1938 (Coleoptera, Buprestidae, Thomassetiini). ZooKeys 116: 37–47. doi: 10.3897/zookeys.116.1403]