Lost, Hidden, and Found: The Herpetofauna of Samar’s Karst Labyrinth

A recent field study to document reptile and amphibian diversity found in Samar Natural Park (SINP) and Samar Island unveils fascinating results.

Guest Blog Post by the Research Team of Samar Island’s Herpetofauna

In the darkness of the Samar rainforest, a flash of color stopped the research team in their tracks. Their headlamps illuminated a small shrub on a worn limestone trail, revealing a tiny pink snake. With a quiet sense of triumph, Yñigo del Prado readied his camera and leaned forward to photograph the coiled serpent within the branches of the shrub.

Although unknown to del Prado’s research team at the time, their rediscovery of the rare blindsnake Ramphotyphlops marxi would become one of the significant findings of the most recent comprehensive field study to document reptile and amphibian diversity found in Samar Natural Park (SINP) and Samar Island. Indeed, first recorded by the eminent zoologist Dioscoro Rabor in 1957 and unseen since, the snake is now a key highlight of the the survey, now published in the open-access journal ZooKeys.

Ramphotyphlops marxi – Marx’s worm snake. (Image credit: Yñigo del Prado).

“Samar Island is a biological frontier hiding in plain sight,” remarks Arvin Diesmos, a former curator in herpetology at the National Museum of the Philippines, and present senior director at the ASEAN Centre for Biodiversity. He was part of an expedition team from the Herpetological Research Collection of the University of Santo Tomas to survey the biodiversity of Samar Island Natural Park.

The primary goal of the expedition was to  generate updated and comprehensive data on the terrestrial vertebrate fauna—from amphibians and reptiles to birds and mammals—that aim to strengthen the scientific foundation for the nomination of SINP to the UNESCO World Heritage List.

The diverse team of biologists was assembled by UST Assistant Professor Mae Diesmos and head of UST–HRC, to spearhead the terrestrial faunal surveys, while project was designed by Professor Eric Zerrudo, also from UST, and the director of the Center for Conservation of Cultural Property and Environment in the Tropics.

Together with biologists from the University of the Philippines in Diliman and Los Banos campus, in close partnership with the Department of Environment and Natural Resources and the Samar provincial government, the project undertook a month-long biodiversity survey of the karst rainforest of SINP – a ~333,339 hectare protected area of intact lowland forest over limestone and a Key Biodiversity Area in the Philippines.

Karst rainforest of SINP. (Image credit: Yñigo del Prado).

At an estimated area of ca 1,310,700 ha, Samar and the nearby island of Leyte count as one of the largest islands of the Philippines. While Samar has gradually experienced progressive decline in forest cover over the last couple of decades, its interior still houses one of the largest intact labyrinths of habitats spanning karst rainforest and cave systems.

“The reptiles and amphibians in limestone karst systems have evolved in remarkable ways. Every major survey [we] conducted reveals something new, something previously undetected just hiding under the woodworks. Which tells us that Samar remains one of the most important—and often understudied, biodiversity strongholds in the eastern region of the Philippines.”

Mae Diesmos

Though, perhaps “understudied” is an overstatement. A number of biological surveys have been conducted in SINP, as referenced in the article, with some of the extensive surveys dating back as early as the 1850s.

 With the benefit of hindsight, the team integrated historical records into their paper, updating species names and distributions to match current classifications. This process effectively cleared up past confusion over identification. In addition, the larger taxon-based field biologists from UST and UP, allowed for more targeted sampling of several taxonomic groups. Increasing the sampling effort subsequently led to more extraordinary discoveries.

Case in point, the team found an additional 39 new records of reptiles and amphibians that bolstered the listing in SINP to a total of 79 species, and new distribution records of three species previously unknown from the island. And of course, there was the collection of the two specimens of R. marxi, whose existence had only been known from two historical records.

Striped leaf gecko. (Image credit: Yñigo del Prado).

Acquiring this valuable data was by no means a simple task. The herpetology team was beset by the onset of the monsoon season, meaning that dry transect walks and even dry clothing were rare. The team also faced the strong currents and high rapids of the adjacent Ulot River as they moved from one site to another, and endured sandfly-infested campsites.

Ulot River Stream. (Image credit: Yñigo del Prado).

Encounters with local herpetofauna were always a joy. In the search for unique and cryptic species of lizards and snakes, the herpetology team relied on some tried and tested methods such as targeted microhabitat sampling of decaying logs, forest litter, and stream banks to look for fossorial species. Some methods were largely improvised; collapsible fishing poles became indispensable to shake down arboreal species or at the very least, encourage them to descend from the canopies.

Some species, however, had to be approached differently, as was the case for Platymantis bayani. The species is part of a larger complex of limestone frogs that could be found in karst formations in the Philippines, and each known species is unique to the location where it is found. On more than one occasion, the herpetology team had to search through overgrown limestone crevices; in others, the group descended into the depths of massive limestone caves in the dark to search for these elusive frogs.

Platymantis bayani – Walter’s limestone frog. (Image credit: Yñigo del Prado).

But Filipinos are nothing if resilient, as a local adage goes. Certainly, Mae Diesmos and her team had their work cut out for them. The officials of the Samar provincial government were notably also very thorough in their coordination and movement across study sites, to ensure the safety of the team. This highlights the importance of collaborative work between research institutions and local government units and stakeholders. Research is considerably more difficult without proper funding and local coordination.

This issue is not unique to Samar. Limited and precious funding to support scientific research remains a challenge to sustain biodiversity surveys across many islands and regions of the country. Much work remains to be done because numerous areas and habitats still lack detailed biodiversity surveys. Field biologists and conservationists have, for many decades now, been locked in a dizzying and (at times) disheartening race against habitat destruction and population decline of key species.

Semper’s forest dragon. (Image credit: Yñigo del Prado).

As more field studies continue, Samar and nearby islands will likely continue to reveal even more of its hidden biodiversity. An inspiring reminder to future researchers that even in the 21st century, the rainforest of the Philippines still holds many scientific discoveries waiting to be made.

Original source:

Diesmos MLL, del Prado YLC, Kim PMM, Caguimbal NALE, Venturina REL, Lorenzo II AN, Diesmos AC (2026) Amphibians and reptiles of Samar Island Natural Park, Philippines, with an updated checklist, a rediscovery, and new records for Samar Island. ZooKeys 1269: 303-328. https://doi.org/10.3897/zookeys.1269.173854

For more articles on zoology, visit the ZooKeys website and follow the journal on BlueSky and Facebook.

A New Spiny Frog Discovered in the Ecuadorian Andes

This visually striking species emphasises the need for habitat protection in the Ecuadorian cloud forests.

A gruelling two-day trek into the remote upper Pastaza basin has revealed a new inhabitant of the Ecuadorian Andes: Pristimantis fergusoni. In a new study published in the open-access journal ZooKeys, a research team led by Juan Pablo Reyes-Puig of Fundación EcoMinga and the Instituto Nacional de Biodiversidad (INABIO) has recently described this fascinating species of spiny frog.

Taxonomy and Fieldwork

Reyes-Puig discusses the primary motivations behind the team’s study:

“Due to its great diversity, Pristimantis is a genus that requires constant taxonomic work, especially in remote and little-studied areas. One such area is the upper Pastaza basin in the central Andes of Ecuador.

Although we have studied this region for almost two decades, each new exploration brings surprises, such as the case of the new Pristimantis fergusoni.”

This constant taxonomic revision stems from the sheer scale of the genus; frogs of the Pristimantis group currently comprise 626 species. Historically, limited scientific funding meant that many of these were described primarily on the basis of morphological evidence.

Fortunately, this has been increasingly remedied over the last decade as a growing community of taxonomists in Colombia, Ecuador, and Peru combine molecular and morphological data to identify and classify new species.

However, carrying out fieldwork in these remote regions remains a formidable challenge. Reyes-Puig highlights the physical demands of conducting herpetological research in the upper montane forests of the eastern Ecuadorian Andes:

“First, it is quite challenging to reach the location after nearly two days of hiking. Then, the cold and almost constant humidity are physical limitations after fatigue, but observing a habitat untouched by humans and species never seen before, such as Pristimantis fergusoni, are a real reward.”

That reward is visually striking. While many frogs in the Pristimantis genus rely on camouflage to blend into the forest floor, P. fergusoni carries a distinct flash of color. The species exhibits notable sexual dimorphism: males are more muted, whereas females possess a bright scarlet belly.

Pristimantis fergusoni. (Photo credit: Juan Pablo Reyes Puig).

The exact reason for this vivid coloring remains a mystery, though Reyes-Puig notes a few plausible theories:

“Knowledge about the behavior and natural history of the new species is very limited, but we believe that the bright colors could serve for communication during courtship or as part of their reproductive strategies.”

Notably, this new species is named after Robert T. Ferguson II, an amateur naturalist who dedicated his life to protecting reptiles and amphibians. As a citizen scientist, Ferguson mapped wildlife in the US and helped fund the protection of rainforests in Latin America. Through his photography and work with groups like Rainforest Trust, he inspired others to care for the wild.

Pristimantis fergusoni. (Video credit: Juan Pablo Reyes Puig).

A Biodiversity Hotspot Under Pressure

The discovery of P. fergusoni is likely just the beginning, with the upper Pastaza basin serving as a taxonomic frontier where many more species await identification. Reyes-Puig estimates that at least eight more new species of amphibians are currently waiting to be described in this region alone.

For now, Pristimantis fergusoni is listed as “Data Deficient” by the IUCN because it has only been found in two locations close to one another – the Cerro Candelaria and Chamana Reserves – leaving scientists without the population data needed to determine its level of risk. However, the team is already working to ensure the frog’s future isn’t left to chance.

“Taxonomic work is usually limited to describing new species,” says Reyes-Puig. “We have gone a step further by ensuring the protection of the new species’ habitat through the declaration of protected areas.”

While this work happens on the ground in the Llanganates-Sangay Ecological Corridor, Reyes-Puig stresses that protecting these species requires global awareness. Climate change and habitat loss are universal threats to amphibians, and local conservation efforts rely on broader environmental responsibility: 

“Small actions such as recycling, waste management, and sustainable activities are important. We know that climate change is a problem that affects amphibians worldwide, but small actions [from the public] are also crucial.”

Pristimantis fergusoni. (Photo credit: Juan Pablo Reyes Puig).

The presence of P. fergusoni is a testament to the region’s immense biodiversity, and a reminder that in the underexplored Andes, discovery and conservation must move at the same urgent pace.

Original source:

Reyes-Puig JP, Yánez-Muñoz MH, Ron SR, Venegas PJ, Ortega J, Carrión-Olmedo JC, Reyes-Puig C (2026) A new spiny frog of the genus Pristimantis (Anura, Strabomantidae) from the eastern slopes of the Ecuadorian Andes. ZooKeys 1269: 83-105. https://doi.org/10.3897/zookeys.1269.162260

For more articles on zoology, visit the ZooKeys website and follow the journal on BlueSky and Facebook.

Convergence in the Canopy: Why the Gracixalus weii treefrog sounds like a songbird

A newly-described treefrog has exhibited a repertoire which mirrors the bird sounds of China’s Leigongshan Nature Reserve.

The genus Gracixalus belongs to the family of Old World Tree Frogs, and is geographically dispersed from Myanmar and western Thailand to Laos, Vietnam, and further to southern China. Despite the considerable number of research on the species richness of Gracixalus, little is known about their vocalisations.

To remedy this problem, the recently described Gracixalus weii in southwest China has been investigated from a bioacoustic standpoint by researchers led by Caichun Peng of the Guizhou Leigongshan Forest Ecosystem Observation and Research Station. 

Published in the open-access scholarly journal Herpetozoa, the study reveals an acoustic convergence between frog advertisement calls and avian communication systems – specifically, the call of Gracixalus weii is remarkably similar to a bird-like chirp commonly performed by the Black-Breasted Thrush (Turdus dissimilis) of the same region.

Similarities like these have frequently led researchers to underestimate frog populations during field surveys because their chirps are easily mistaken for local bird songs.

Adult male of Gracixalus weii from Leishan County, Guizhou Province. (Image credit: Peng et al.).

To the human ear, vocalisations in the Leigongshan Nature Reserve often sound like a melodious bird song because both the Gracixalus weii and Black-Breasted Thrush use a similar pattern: a longer introductory note, followed by two shorter notes, and almost identical pitches. This phenomenon provides evidence to suggest that the evolution of acoustic symbols in amphibians could be influenced by broad ecological interactions, including with that of birds. 

The history of observed similarities between frog and bird vocalisations can be traced further back; the acoustic convergence recorded in the Himalayan rapids in 1984 between frogs in the genus Nanorana and the bird Phylloscopius maginostrostris, for instance, underpins these recent findings.

Cases like these demonstrate that bioacoustic data adds value to species identification, particularly because advertisement calls serve as species-specific courtship signals that play an important role in evolutionary diversification.

Advertisement calls of the Gracixalus weii. A. 60 s oscillograms showing five calls of Gracixalus weii; B. 1 s oscillograms and corresponding spectrograms showing one type A call of G. weii; C. 1 s oscillograms and corresponding spectrograms showing one type B call of G. weii. (Image credit: Peng et al.).

For cryptic species that may appear identical, acoustic features also provide a reliable alternative to morphological or molecular diagnosis, offering clear evidence for taxonomic validity. Additionally, since many species are difficult to observe visually in dense habitats, such as frogs hiding within bamboo, relying on vocal signatures ensures that biodiversity is not misidentified during field surveys.

The authors argue that future research should focus on combining morphological, genetic, and bioacoustic evidence to better understand the species richness and cryptic diversity within the genus Gracixalus. A key priority is conducting experimental work, specifically playback or “replay experiments,” to observe how Gracixalus weii and the Black-breasted Thrush (Turdus dissimilis) respond to one another’s calls.

As such, the song of Gracixalus weii is a reminder that a familiar tune can be the perfect disguise for a species we are only just beginning to understand.

Original source:
Peng C, Shen T, Li S, Liu J, Ye R, Li D, Chen J, Tang X, Su H (2026) A bird-like vocalization in a treefrog (Anura, Rhacophoridae): Analysis of advertisement call characteristics in Gracixalus weii. Herpetozoa 39: 7-15. https://doi.org/10.3897/herpetozoa.39.e175324

For more articles on herpetology, visit the Herpetozoa website and follow the journal on BlueSky and Facebook.

Extraordinary treefrog discovered in the Andes of Ecuador

An adult of the newly described species, Hyloscirtus hillisi. Photo by Gustavo Pazmiño, BIOWEB Ecuador.

A new treefrog species was discovered during a two-week expedition to a remote tabletop mountain at Cordillera del Cóndor, a largely unexplored range in the eastern Andes.

“To reach the tabletop, we walked two days along a steep terrain. Then, between sweat and exhaustion, we arrived to the tabletop where we found a dwarf forest. The rivers had blackwater and the frogs were sitting along them, on branches of brown shrubs similar in color to the frogs’ own. The frogs were difficult to find, because they blended with their background,” Alex Achig, one of the field biologists who discovered the new species comments on the hardships of the expedition.

Curiously, the frog has an extraordinary, enlarged claw-like structure located at the base of the thumb. Its function is unknown, but it could be that it is used either as a defence against predators or as a weapon in fights between competing males.

Having conducted analyses of genetic and morphologic data, scientists Santiago R. Ron, Marcel Caminer, Andrea Varela, and Diego Almeida from the Catholic University of Ecuador concluded that the frog represented a previously unknown species. It was recently described in the open-access journal ZooKeys.

Unlike other frogs, the new species has a claw at the base of the thumb. Photo by Gustavo Pazmiño, BIOWEB Ecuador.

The species name, Hyloscirtus hillisi, honors Dr. David Hillis, a member of the National Academy of Sciences of the United States of America, who discovered three closely related frog species in the same genus in the 1980s, while conducting a series of field trips to the Andes of southern Ecuador. Throughout his career, Dr. Hillis has made significant contributions to the knowledge of Andean amphibians and reptiles.

Despite being newly described, Hyloscirtus hillisi is already at risk of extinction. It has a small distribution range near a large-scale mining operation carried out by a Chinese company. Habitat destruction in the region has been recently documented by the NGO Amazon Conservation.

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Original source:

Ron SR, Caminer MA, Varela-Jaramillo A, Almeida-Reinoso D (2018) A new treefrog from Cordillera del Cóndor with comments on the biogeographic affinity between Cordillera del Cóndor and the Guianan Tepuis (Anura, Hylidae, Hyloscirtus). ZooKeys 809: 97-124. https://doi.org/10.3897/zookeys.809.25207

A metamorph of the new species, Hyloscirtus hillisi. Photo by Darwin Núñez, BIOWEB Ecuador.

Named after Stanley Kubrick, a new species of frog is a ‘clockwork orange’ of nature

Two new treefrog species were discovered in the Amazon Basin of Bolivia, Peru, and Brazil. Both had been previously misidentified as another superficially identical species.

Curiously, one of them received a name translating to ‘demon’ or ‘devil’. The second one was named in honor of famous American filmmaker Stanley Kubrick, because of his masterpiece A Clockwork Orange.

Having conducted analyses of genetic, morphologic, and bioacoustic data, scientists C. Daniel Rivadeneira, Dr. Pablo J. Venegas, and Dr. Santiago R. Ron concluded that the amphibians represented two previously unknown species that used to go by the name of the Sarayacu treefrog (Dendropsophus parviceps).

As a result of this research collaboration between Ecuador’s Catholic University (PUCE) and Peru’s Centro de Ornitología y Biodiversidad (CORBIDI), the treefrogs were recently described as new to science in the open access journal ZooKeys.

DSC06331The scientists remind that, back in 1972, when Anthony Burgess explained the title of his famous novel A Clockwork Orange, he said: “I’ve implied the junction of the organic, the lively, the sweet – in other words, life, the orange – and the mechanical, the cold, the disciplined (…)”

“Without knowing, he was also giving a good metaphor to describe ecosystems,” comment the researchers. “Nature works as the interplay between life and its cold, mechanical, and disciplined physical matrix.”

Furthermore, both new frogs, scientifically listed as D. kubricki and D. kamagarini, are characterized by having a bright orange blotch on the shanks, reminiscent of the ‘orange pieces of nature’.

On the other hand, the species name kamagarini refers to ‘demon’ or ‘devil’, as per its translation from the Matsigenka language spoken in southeastern Peru. One of the characteristic features of the new species D. kamagarini are namely its horn-like protuberances on the upper eyelids.Bolivia

Amphibians are important pieces in ecosystems as secondary consumers in food chains. They also play a significant role in decomposition and nutrient cycling.

Stanley Kubrick – arguably one of the most brilliant and influential film directors of all time – left an immemorial legacy in cinema. His masterpiece, A Clockwork Orange (1971), was based on Anthony Burgess’s 1962 novel of the same name.

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Original source:

Rivadeneira CD, Venegas PJ, Ron SR (2018) Species limits within the widespread Amazonian treefrog Dendropsophus parviceps with descriptions of two new species (Anura, Hylidae). ZooKeys 726: 25-77. https://doi.org/10.3897/zookeys.726.13864