‘Social distancing’ saves frogs: New approach to identify individual frogs noninvasively

aitik Patel and Dr Abhijit Das of the Wildlife Institute of India came up with one of the very first non-invasive approaches to identify individual frogs using photos from their natural habitats, which are then processed with the animal recognition software HotSpotter. Their unique method is described in the open-access, peer-reviewed scientific journal Herpetozoa.

A Beautiful stream frog (Amolops formosus) in a Himalayan torrent stream
Photo by Naitik Patel

Globally, 41% amphibian species are regarded as threatened with extinction. However, when it comes to the case of India, the majority of the species falls in the Data Deficient group, according to the criteria of the International Union for Conservation of Nature‘s (IUCN) Red List of Threatened Species.

This means that we hardly have any population data for Indian amphibians, which leads to a serious conservation bottleneck, especially when you are dealing with elusive herpiles. Therefore, there is the pressing priority to obtain demographic trends to prompt and support conservation actions for endemic and habitat-dependent species.

While demographics of natural populations is best estimated with the mark-recapture technique, used in animals, where individuals have distinct body markings, such as the stripes in a tiger, the dots in a whale shark and the fingerprints in a human. In the meantime, while frogs are well known for their individual-specific markings and colour patterns, this kind of technique has never been used in amphibians, even though they have long been recognised as some of the most vulnerable animals on Earth.

On the other hand, it is hardly possible to capture and mark individual frogs in the wild. So, Naitik Patel and Dr Abhijit Das of the Wildlife Institute of India came up with one of the very first non-invasive approaches to identify individual frogs using photos from their natural habitats, which are then processed with the animal recognition software HotSpotter. Their unique method is described in the open-access, peer-reviewed scientific journal Herpetozoa.

“Capturing each frog is not possible in the field, so to address this problem, we conducted a short study on Beautiful stream frogs (Amolops formosus), a species that, just like many other amphibians, has variable body markings amongst individuals. As this species inhabits the Himalayan torrent stream, which is difficult to access, we tried our best to photograph each frog from a distance to avoid any kind of physical contact,”

explains Naitik Patel, a PhD student at the Wildlife Institute of India.

A Beautiful stream frog (Amolops formosus)
Photo by Abhijit Das

Having concluded their study with a success rate of 94.3%, the research team is hopeful that their protocol could be effectively implemented in rapid population estimation for many endangered species of frogs.

“We conducted photographic documentation to capture the unique markings of each frog, and then compared them, using computer-assisted individual identification. With this method, the number of individuals can be counted to estimate the population structure. This study is exceptional, owing to the minimal disturbance it causes to the frogs. Such a technique has rarely been tried on amphibians and is a promising method to estimate their numbers. It can also be used in citizen science projects,”

comments senior scientist Dr Abhijit Das.

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Original source:

Patel NG, Das A (2020) Shot the spots: A reliable field method for individual identification of Amolops formosus (Anura, Ranidae). Herpetozoa 33: 7-15. https://doi.org/10.3897/herpetozoa.33.e47279

Extraordinary treefrog discovered in the Andes of Ecuador

An adult of the newly described species, Hyloscirtus hillisi. Photo by Gustavo Pazmiño, BIOWEB Ecuador.

A new treefrog species was discovered during a two-week expedition to a remote tabletop mountain at Cordillera del Cóndor, a largely unexplored range in the eastern Andes.

“To reach the tabletop, we walked two days along a steep terrain. Then, between sweat and exhaustion, we arrived to the tabletop where we found a dwarf forest. The rivers had blackwater and the frogs were sitting along them, on branches of brown shrubs similar in color to the frogs’ own. The frogs were difficult to find, because they blended with their background,” Alex Achig, one of the field biologists who discovered the new species comments on the hardships of the expedition.

Curiously, the frog has an extraordinary, enlarged claw-like structure located at the base of the thumb. Its function is unknown, but it could be that it is used either as a defence against predators or as a weapon in fights between competing males.

Having conducted analyses of genetic and morphologic data, scientists Santiago R. Ron, Marcel Caminer, Andrea Varela, and Diego Almeida from the Catholic University of Ecuador concluded that the frog represented a previously unknown species. It was recently described in the open-access journal ZooKeys.

Unlike other frogs, the new species has a claw at the base of the thumb. Photo by Gustavo Pazmiño, BIOWEB Ecuador.

The species name, Hyloscirtus hillisi, honors Dr. David Hillis, a member of the National Academy of Sciences of the United States of America, who discovered three closely related frog species in the same genus in the 1980s, while conducting a series of field trips to the Andes of southern Ecuador. Throughout his career, Dr. Hillis has made significant contributions to the knowledge of Andean amphibians and reptiles.

Despite being newly described, Hyloscirtus hillisi is already at risk of extinction. It has a small distribution range near a large-scale mining operation carried out by a Chinese company. Habitat destruction in the region has been recently documented by the NGO Amazon Conservation.

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Original source:

Ron SR, Caminer MA, Varela-Jaramillo A, Almeida-Reinoso D (2018) A new treefrog from Cordillera del Cóndor with comments on the biogeographic affinity between Cordillera del Cóndor and the Guianan Tepuis (Anura, Hylidae, Hyloscirtus). ZooKeys 809: 97-124. https://doi.org/10.3897/zookeys.809.25207

A metamorph of the new species, Hyloscirtus hillisi. Photo by Darwin Núñez, BIOWEB Ecuador.

New species of frog from the Neotropics carries its heart on its skin

In the Neotropics, there is a whole group of so-called glassfrogs that amaze with their transparent skin covering their bellies and showing their organs underneath. A recently discovered new species from Amazonian Ecuador, however, goes a step further to fully expose its heart thanks to the transparent skin stretching all over its chest as well as tummy.

The new amphibian is described by a team of scientists led by Dr. Juan M. Guayasamin, Universidad San Francisco de Quito, Ecuador, in the open access journal ZooKeys.

It can also be distinguished by the relatively large dark green spots at the back of its head and the foremost part of the body. Additionally, the species has a characteristic long call.

The new frog is named Hyalinobatrachium yaku, where the species name (yaku) translates to ‘water’ in the local language Kichwa. Water and, more specifically, slow-flowing streams are crucial for the reproduction of all known glassfrogs.

The reproductive behaviour is also quite unusual in this species. Males are often reported to call from the underside of leaves and look after the egg clutches.

Having identified individuals of the new species at three localities, the researchers note some behavioural differences between the populations. Two of them, spotted in the riverine vegetation of an intact forest in Kallana, have been calling from the underside of leaves a few metres above slow-flowing, relatively narrow and shallow streams. Another frog of the species has been observed in an area covered by secondary forests in the Ecuadorian village of Ahuano. Similarly, the amphibian was found on the underside of a leaf one metre above a slow-flowing, narrow and shallow stream.

oo_135330However, at the third locality – a disturbed secondary forest in San José de Payamino – the studied frogs have been perching on leaves of small shrubs, ferns, and grasses some 30 to 150 cm above the ground. Surprisingly, each of them has been at a distance greater than 30 metres from the nearest stream.

The researchers note that, given the geographic distance of approximately 110 km between the localities where the new species has been found, it is likely that the new species has a broader distribution, including areas in neighbouring Peru.

The uncertainty about its distributional range comes from a number of reasons. Firstly, the species’ tiny size of about 2 cm makes it tough to spot from underneath the leaves. Then, even if specimens of the species have been previously collected, they would be almost impossible to identify from museum collection, as many of the characteristic traits, such as the dark green marks, are getting lost after preservation. This is why the conservation status of the species has been listed as Data Deficient, according to the IUCN Red List criteria.

Nevertheless, the scientists identify the major threats to the species, including oil extraction in the region and the related water pollution, road development, habitat degradation and isolation.

“Glassfrogs presumably require continuous tracts of forest to interact with nearby populations, and roads potentially act as barriers to dispersal for transient individuals,” explain the authors.

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Original source:

Guayasamin JM, Cisneros-Heredia DF, Maynard RJ, Lynch RL, Culebras J, Hamilton PS (2017) A marvelous new glassfrog (Centrolenidae, Hyalinobatrachium) from Amazonian Ecuador. ZooKeys 673: 1-20. https://doi.org/10.3897/zookeys.673.12108