Tag: biodiversity

New Chinese leaf-roller weevil does not know how to roll leaves

A long-term project on insect-seed interactions, currently being carried out by researchers of the Institute of Zoology (Chinese Academy of Sciences) in a subtropical forest near Dujiangyan City, Sichuan, China, revealed the presence of larvae of an unknown weevil species eating the seeds in the pods of a shrubby legume.

Scientists from the Institute of Zoology, China, Xiangyang Lv, Zhishu Xiao, Zhiliang Wang, Runzhi Zhang, and Miguel A. Alonso-Zarazaga, also affiliated with the Museo Nacional de Ciencias Naturales (CSIC), Spain, published the description of the new genus and species, named Evemphyron sinense, and added data on its biology in the open access journal ZooKeys.

Because of its peculiar features, it was difficult to locate the closest relatives of this new species. However, a few characteristic traits of the body and genitalia, strongly pointed to its placement within the tribe Deporaini.

The closest, although seemingly rather far-related to the new species, beetles are considered to be a genus with scattered distribution, stretching from the Russian Far East to the Indian Himalaya.

However, they are smaller weevils whose females cut shoots to lay their eggs. On the other hand, the males in both genera share a peculiar patch of hairs, probably related to pheromone dispersal. Likewise, each species is associated with legumes.

The curious feature of this weevil group (Deporaini) is that the vast majority of its species are leaf-rollers. The females cut a hardwood leaf in a peculiar and mathematical way and roll it, laying one egg inside each one. This behaviour, which is known in other far-related weevils of the same family, seems to have appeared independently in different evolutionary branches. In the case of Deporaini, this behavioural trait evolved after the new genus became a distinct one.

As a result, the new genus is considered to be one of the two most primitive within the tribe. In fact, it might be the most primitive one, taking into account a number of morphological traits as well.

It could be that the new beetle never knew how to roll a leaf to make nests and shelter its offspring.

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Original source:

Lv X, Alonso-Zarazaga MA, Xiao Z, Wang Z, Zhang R (2016) Evemphyron sinense, a new genus and species infesting legume seedpods in China (Coleoptera, Attelabidae, Rhynchitinae).ZooKeys 600: 89-101. doi: 10.3897/zookeys.600.6709

New species of spider discovered ‘next door’ at the borders of cereal fields in Spain

The image that comes to mind when we think of new species being discovered is that of scientists sampling in remote tropical forests, where humans have barely set foot in. However, new species waiting to be discovered can in fact be very close to us, even if we live in a strongly humanized continent like Europe.

Scientists Eduardo Morano, University of Castilla-La Mancha, and Dr Raul Bonal, University of Extremadura, have discovered a new species of spider, formally called Cheiracanthium ilicis, in an area which does not match the image of a pristine habitat at all.

The new species was found in a strongly humanized area in central Spain, specifically, in isolated trees at the borders of cereal fields. These trees, mainly Holm oaks (Quercus ilex), are those remaining of the former oak woodlands that once covered the Iberian Peninsula and which have been cleared for centuries.

The systematic sampling revealed the newly discovered spider had a an exclusive preference for Holm Oaks, as all individuals were collected from the trunks and branches of these trees. Therefore, it was named after this tree’s scientific name “ilicis”.

While adults measure about a centimetre in body length, juveniles are smaller and have greenish colouration that mimics new oak shoots.

The mouthparts are proportionally large, as in the case of other species of the genus, like closely related C. mildei. In the case of the latter, the mouthparts are large enough to penetrate human skin, although the effects of the poison appear mild.

From a conservation perspective, the present study puts forward the need to preserve isolated trees in agricultural landscapes. They are not only a refuge to common forest organisms but to novel species yet to be discovered as well.

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Original source:

Morano E, Bonal R (2016) Cheiracanthium ilicis sp. n. (Araneae, Eutichuridae), a novel spider species associated with Holm Oaks (Quercus ilex). ZooKeys 601: 21-39. doi: 10.3897/zookeys.601.8241

A hair’s breadth away: New tarantula species and genus honors Gabriel García Márquez

With its extraordinary defensive hairs, a Colombian tarantula proved itself as not only a new species, but also a new genus. It is hypothesised that the new spider is the first in its subfamily to use its stinging hairs in direct attack instead of ‘kicking’ them into the enemy.

Described in the open access journal ZooKeys by an international research team, led by Carlos Perafán, University of the Republic, Uruguay, the name of the new spider genus honours an indigenous people from the Caribbean coast region, whose language and culture are, unfortunately, at serious risk of extinction. Meanwhile, its species’ name pays tribute to renowned Colombian author and Nobel laureate for his novel ‘One Hundred Years of Solitude’ Gabriel García Márquez.

The new tarantula, formally called Kankuamo marquezi, was discovered in Sierra Nevada de Santa Marta, Colombia. When examined, the arachnid showed something extraordinary about its defensive hairs and its genitalia. The hairs were noted to form a small oval patch of lance-shaped barbs, hypothesised by the scientists to have evolved to defend their owners by direct contact.

On the other hand, when defending against their aggressors, the rest of the tarantulas in this subfamily need to first face the offender and then vigorously rub their hind legs against their stomachs. Aimed and shot at the enemy, a ball of stinging hairs can cause fatal injuries to small mammals when landed into their mucous membrane (the layer that covers the cavities and shrouds the internal organs in the body). Once thrown, the hairs leave a bald spot on the tarantula’s belly.

“This new finding is a great contribution to the knowledge of the arachnids in Colombia and a sign of how much remains to be discovered,” point out he authors.

“The morphological characteristics present on Kankuamo marquezi open the discussion about the phylogenetics relationship between subfamilies of Theraphosidae tarantulas and the evolutionary pressures that gave rise to the urticating hairs.”

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Original source:

Perafán C, Galvis W, Gutiérrez M, Pérez-Miles F (2016) Kankuamo, a new theraphosid genus from Colombia (Araneae, Mygalomorphae), with a new type of urticating setae and divergent male genitalia. ZooKeys 601: 89-109. doi: 10.3897/zookeys.601.7704

New blind and rare planthopper species and genus dwells exclusively in a Brazilian cave

This cave planthopper species new to science is only the second dwelling exclusively in the subterranean depths of Brazil from its family. Surviving without seeing the light of the day at any point of its life, this species has neither the eyes, nor the vivid colouration, nor the functional wings typical for its relatives.

Yet, these are only part of the reasons why the new planthopper needed to have a separate new genus established for itself. The new species is described by a research team from the Center of Studies on Subterranean Biology, Brazil, in the open access journal Deutsche Entomologische Zeitschrift.

The planthopper is called Iuiuia caeca, with the genus name (Iuiuia) referring to the locality, where it was found, and its species name (caeca) translating to ‘blind’ in Latin. It is predominantly yellowish insect that measures only 3 mm, which is small even by planthopper standards.

At first glance, the new cave planthopper appears as if it has been hiding from human eyes all along. So far, it has been located in a single cave in the Iuiú municipality, Bahia state, Brazil, where the team of Prof. Rodrigo Ferreira, Federal University of Lavras (UFLA), Brazil, spotted the insect. He then contacted cave planthopper specialist at the Museum für Naturkunde, Berlin, Prof. Hannelore Hoch, and collaboratively they decided to document and describe the new species. The limestone cave is yet to be fully explored since it floods during the rainy periods.

In the meantime, the cave’s only entrance is a small opening, which, on the other hand, clearly imposes a huge stability to the atmosphere. Moreover, although the researchers visited the cave on five occasions, they managed to find the species on two of them only. The planthopper was nowhere to be find in the neighbouring subterranean habitats either, which strongly suggests that it is a rare short-range endemic.

Being such a rarity, the blind new planthopper ought to be on the conservation radar. Although the scientists did not notice any signs of the cave having ever been visited by humans before; and its immediate surroundings have not been impacted by mining activities, yet, such threat is not to be excluded. In fact, the area is being currently evaluated for its potential for limestone extraction.

“It is to be hoped that legal measures for the conservation of the subterranean fauna of Brazil – which constitutes one of the country’s unique biological resources – will be developed and consequently reinforced,” conclude the authors.

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Original source:

Hoch H, Ferreira RL (2016) Iuiuia caeca gen. n., sp. n., a new troglobitic planthopper in the family Kinnaridae (Hemiptera, Fulgoromorpha) from Brazil. Deutsche Entomologische Zeitschrift63(2): 171-181. doi: 10.3897/dez.63.8432

Remarkably diverse flora in Utah, USA, trains scientists for future missions on Mars

Future Martian explorers might not need to leave the Earth to prepare themselves for life on the Red Planet. The Mars Society have built an analogue research site in Utah, USA, which simulates the conditions on our neighbouring planet.

Practicing the methods needed to collect biological samples while wearing spacesuits, a team of Canadian scientists have studied the diverse local flora. Along with the lessons that one day will serve the first to conquer Mars, the researchers present an annotated checklist of the fungi, algae, cyanobacteria, lichens, and vascular plants from the station in their publication in the open-access journal Biodiversity Data Journal.

Located in the desert approximately 9 km outside of Hanksville, Utah, and about 10 km away from the Burpee Dinosaur Quarry, a recently described bone bed from the Jurassic Morrison Formation, the Mars Desert Research Station (MDRS) was constructed in 2002. Since then, it has been continuously visited by a wide range of researchers, including astrobiologists, soil scientists, journalists, engineers, and geologists.

Astrobiology, the study of the evolution and distribution of life throughout the universe, including the Earth, is a field increasingly represented at the MDRS. There, astrobiologists can take advantage of the extreme environment surrounding the station and seek life as if they were on Mars. To simulate the extraterrestrial conditions, the crew members even wear specially designed spacesuits so that they can practice standard field work activities with restricted vision and movement.

In their present research, the authors have identified and recorded 38 vascular plant species from 14 families, 13 lichen species from seven families, 6 algae taxa including both chlorophytes and cyanobacteria, and one fungal genus from the station and surrounding area. Living in such extreme environments, organisms such as fungi, lichens, algae, and cyanobacteria are of particular interest to astrobiologists as model systems in the search for life on Mars.

However, the authors note that there is still field work to be executed at the site, especially during the spring and the summer so that the complete local diversity of the area can be captured.

“While our present checklist is not an exhaustive inventory of the MDRS site,” they explain, “it can serve as a first-line reference for identifying vascular plants and lichens at the MDRS, and serves as a starting point for future floristic and ecological work at the station.”

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Original source:

Sokoloff P, Hamilton P, Saarela J (2016) The “Martian” flora: new collections of vascular plants, lichens, fungi, algae, and cyanobacteria from the Mars Desert Research Station, Utah.Biodiversity Data Journal 4: e8176. doi: 10.3897/BDJ.4.e8176

The Godzilla goby is the latest new species discovered by the Smithsonian DROP project

As part of the Deep Reef Observation Project (DROP), initiated by the Smithsonian Institution, a new goby fish species was discovered in the southern Caribbean. Living at depths greater than conventional SCUBA divers can access, yet too shallow to be of interest for deep-diving submersibles, the fish will now be known under the common name of the Godzilla goby.

Its discoverers Drs Luke Tornabene, Ross Robertson and Carole C. Baldwin, all affiliated with the Smithsonian Institution, have described the species in the open access journal ZooKeys.

Formally called Varicus lacerta, the species name translates to ‘lizard’ in Latin and refers to the reptilian appearance of the fish. Its prime colors are bright yellow and orange, while the eyes are green.

The new goby also has a disproportionately large head and multiple rows of recurved canine teeth in each jaw. This is also why the research team has chosen the common name of the Godzilla goby.

Apart from its lovely coloration, the new fish stands out with its branched, feather-like pelvic-fin rays and the absence of scales.

The scientists caught the Godzilla goby thanks to the manned submersible Curasub, which had already helped in discovering several species over the course of the project. Last year, Drs Ross Robertson and Carole Baldwin had another new goby published in ZooKeys. That time, they even named it after the submersible. Earlier this year, the DROP team also described nine additional new species, many of which were collected by the Curasub.

The manned submersible Curasub reaches depths up to 300 m in search of tropical marine fishes and invertebrates. As a result, it provides new information on the fauna that inhabits poorly studied deep-reef ecosystems.

The sub relies on two hydraulic arms, one equipped with a suction hose, and the other designed to immobilize the fish with an anaesthetizing chemical. That way, not only do the researchers gather live specimens, which once collected, are deposited into a vented acrylic cylinder attached to the outside of the sub, but also individuals suitable for critical DNA analyses.

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Original source:

Tornabene L, Robertson DR, Baldwin CC (2016) Varicus lacerta, a new species of goby (Teleostei, Gobiidae, Gobiosomatini, Nes subgroup) from a mesophotic reef in the southern Caribbean. ZooKeys 596: 143-156. doi: 10.3897/zookeys.596.8217

More than just hippos and crocs: The hidden biodiversity of the iSimangaliso Wetland Park

iSimangaliso Wetland Park, a UNESCO World Heritage Site in the sub-tropical north-eastern corner of South Africa has become famous for its birdlife, crocodiles and hippopotamuses that frolic in the warm estuarine waters of Lake St Lucia. However, there’s more to the park than the “big and hairy”, according to aquatic ecologist Prof Renzo Perissinotto at Nelson Mandela Metropolitan University (NMMU) in Port Elizabeth, whose research is published in the open access journal ZooKeys.

“Although we have spent several decades focusing on life in the estuary, we only recently came to realise that much of the wealth of biodiversity in the park exists in the small freshwater ponds that are adjacent to, but disconnected from, the main lake,” he says.

The St Lucia lake itself is generally brackish and is located on a large sandy expanse known as the Maputaland coastal plain. Dotted across the landscape of this coastal foreland are numerous temporary freshwater ponds, seeps and small streams that are disconnected from the brackish lake body.

A team of self-proclaimed “beetle nerds”, led by Prof Perissinotto, got together from NMMU and Plymouth University (UK) and uncovered more species of water beetles in these tiny water bodies than is known for any other similar-sized region in southern Africa.

The beetle collection trips were done over a 16-month period and revealed 68 species of predaceous water beetles alone, termed more formally as the “Hydradephaga”. The iSimangaliso Wetland Park houses approximately 20% of the total number of known species for this beetle group in the whole of southern Africa. Of the species collected during their expeditions, five have never been recorded in South Africa before, highlighting our poor understanding of aquatic insect distributions in this part of the world.

Most of the species collected (almost 80%) belonged to the family Dytiscidae, more commonly known as “diving beetles” due to their lifestyle that involves coming up for air and immediately diving back down to the depths to carry on hunting unsuspecting prey, which can be as large as small fish and amphibians.

Prof Perissinotto and his NMMU colleague Dr Matthew Bird, together with water beetle specialist Prof David Bilton (Plymouth University), collected specimens ranging from 1 mm to almost 5 cm in length (the tadpole eaters). According to Prof Bilton, “Irrespective of size, these water beetles are a crucial component of the iSimangaliso ecosystem in that they are the primary predators in these temporary wetlands, which generally lack fish. Their abundance and diversity can be used to gauge the overall health of wetland ecosystems as they are sensitive to pollution, for instance”.

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Original source:

Perissinotto R, Bird MS, Bilton DT (2016) Predaceous water beetles (Coleoptera, Hydradephaga) of the Lake St Lucia system, South Africa: biodiversity, community ecology and conservation implications. ZooKeys 595: 85-135. doi: 10.3897/zookeys.595.8614

Singing in the rain: A new species of rain frog from Manu National Park, Amazonian Peru

A new rain frog species has been described from Amazonian Peru and the Amazonian foothills of the Andes. The frog, given the name Pristimantis pluvialis, was found by researchers from Southern Illinois University Carbondale, the University of Michigan, and the National University of San Antonio Abad of Cusco in Peru. The discovery is published in the open access journal ZooKeys.

Several individuals of P. pluvialis were found during nocturnal surveys near Manu National Park, a region recognized as having the highest diversity of reptiles and amphibians of any protected area.

The species has also been collected within the private conservation area Bosque Nublado, owned by the Peruvian NGO Perú Verde, and within the Huachiperi Haramba Queros Conservation Concession, the first such type of concession granted to a native community in Peru.

The new species is likely found within the park as well, bringing the number of known amphibian species in this area to 156. Similarly to other species within its genus, which is among the largest vertebrate genera, the new rain frog exhibits direct development. This means that it is capable of undergoing its entire life cycle without a free-living tadpole stage.

It can be distinguished from other members of its genus by call, skin texture, and the presence of a rostral papilla. It was given the name “pluvialis”, translatable to “rainy” from Latin, to denote the incredibly rain-soaked habitat it lives in (>8 meters of rain yearly), and because it was found calling only after heavy rains.

Unfortunately, when a fungal disease, known as the amphibian chytrid fungus, arrived in the area back in the early 2000s, many frog species in and around the region began to decline. Out of the studied ten individuals of the presently described new species, four were found to be infected. However, the impact of the disease on these particular rain frogs is still unknown, and their numbers do not seem to have decreased.

“This discovery highlights the need for increased study throughout the tropics, for example Manu NP and its surrounding areas have been well studied, but despite these efforts, new species are being continuously discovered,” points out first author Alex Shepack, a PhD student in the laboratory of co-author Dr Alessandro Catenazzi at Southern Illinois University.

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Original source:

Shepack A, von May R, Ttito A, Catenazzi A (2016) A new species of Pristimantis (Amphibia, Anura, Craugastoridae) from the foothills of the Andes in Manu National Park, southeastern Peru. ZooKeys 594: 143-164. doi: 10.3897/zookeys.594.8295

Finding the real treasure of the Incas: Two new frog species from an unexplored region

Inaccessibility and mysticism surrounding the mist-veiled mountains of the central Andes make this region promising to hide treasures. With an area of 2197 km2, most of the Llanganates National Park, Ecuador, is nearly unreachable and is traversed only by foot. However, fieldwork conducted by researchers from the Museo de Zoología at Catholic University of Ecuador resulted in the discovery of a more real and tangible gem: biodiversity.

Among other surprises, during their expeditions the researchers discovered two new species of rain frogs, formally named P. llanganati and P. yanezi. The new species are characterized by the spiny appearance typical of several species inhabiting montane forests. The study was published in the open access journal ZooKeys.

The new rain frogs belong to the megadiverse genus Pristimantis. They are direct-developing frogs, which means that they lack a tadpole stage and therefore do not undergo metamorphosis.

The Neotropical Andes houses a spectacular radiation of Pristimantis, especially in the Montane Forests of the eastern slopes of the Ecuadorian Andes. The species richness of this genus is still underestimated as a consequence of their cryptic morphology and the still sparse amphibian inventories in unexplored regions such as the Llanganates National Park.

The discovery reminds the authors of a mystic local legend dating from the 16th century, when the Inca Empire fell into the hands of Spanish conquerors. Word has it that in exchange for the young emperor’s life, Atahualpa, Incas offered to fill an entire room with tons of gold. However, the Spaniards broke their promise and the emperor was executed. A small group of loyal Incas led by General Rumiñahui decided to hide both, the mummy of Atahualpa and the gold, in the depths of the jungle of the Llanganates National Park.

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Original source:

Navarrete MJ, Venegas PJ, Ron SR (2016) Two new species of frogs of the genus Pristimantis from Llanganates National Park in Ecuador with comments on the regional diversity of Ecuadorian Pristimantis (Anura, Craugastoridae). ZooKeys 593: 139-162. doi: 10.3897/zookeys.593.8063

How the names of organisms help to turn ‘small data’ into ‘Big Data’

Innovation in ‘Big Data’ helps address problems that were previously overwhelming. What we know about organisms is in hundreds of millions of pages published over 250 years. New software tools of the Global Names project find scientific names, index digital documents quickly, correcting names and updating them. These advances help “Making small data big” by linking together to content of many research efforts. The study was published in the open access journal Biodiversity Data Journal.

The ‘Big Data’ vision of science is transformed by computing resources to capture, manage, and interrogate the deluge of information coming from new technologies, infrastructural projects to digitise physical resources (such as our literature from the Biodiversity Heritage Library), or digital versions of specimens and records about specimens by museums.

Increased bandwidth has made dialogue among distributed data centres feasible and this is how new insights into biology are arising. In the case of biodiversity sciences, data centres range in size from the large GenBank for molecular records and the Global Biodiversity Information Facility for records of occurrences of species, to a long tail of tens of thousands of smaller datasets and web-sites which carry information compiled by individuals, research projects, funding agencies, local, state, national and international governmental agencies.

The large biological repositories do not yet approach the scale of astronomy and nuclear physics, but the very large number of sources in the long tail of useful resources do present biodiversity informaticians with a major challenge – how to discover, index, organize and interconnect the information contained in a very large number of locations.

In this regard, biology is fortunate that, from the middle of the 18th Century, the community has accepted the use of latin binomials such as Homo sapiens or Ba humbugi for species. All names are listed by taxonomists. Name recognition tools can call on large expert compilations of names (Catalogue of Life, Zoobank, Index Fungorum, Global Names Index) to find matches in sources of digital information. This allows for the rapid indexing of content.

Even when we do not know a name, we can ‘discover’ it because scientific names have certain distinctive characteristics (written in italics, most often two successive words in a latinised form, with the first one – capitalised). These properties allow names not yet present in compilations of names to be discovered in digital data sources.

The idea of a names-based cyberinfrastructure is to use the names to interconnect large and small distributed sites of expert knowledge distributed across the Internet. This is the concept of the described Global Names project which carried out the work described in this paper.

The effectiveness of such an infrastructure is compromised by the changes to names over time because of taxonomic and phylogenetic research. Names are often misspelled, or there might be errors in the way names are presented. Meanwhile, increasing numbers of species have no names, but are distinguished by their molecular characteristics.

In order to assess the challenge that these problems may present to the realization of a names-based cyberinfrastructure, we compared names from GenBank and DRYAD (a digital data repository) with names from Catalogue of Life to assess how well matched they are.

As a result, we found out that fewer than 15% of the names in pair-wise comparisons of these data sources could be matched. However, with a names parser to break the scientific names into all of their component parts, those parts that present the greatest number of problems could be removed to produce a simplified or canonical version of the name. Thanks to such tools, name-matching was improved to almost 85%, and in some cases to 100%.

The study confirms the potential for the use of names to link distributed data and to make small data big. Nonetheless, it is clear that we need to continue to invest more and better names-management software specially designed to address the problems in the biodiversity sciences.

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Original source:

Patterson D, Mozzherin D, Shorthouse D, Thessen A (2016) Challenges with using names to link digital biodiversity information. Biodiversity Data Journal, doi: 10.3897/BDJ.4.e8080.

Additional information:

The study was supported by the National Science Foundation.