extinct species

What can we learn from vanishing wildlife species: the case of the Pyrenean Ibex

The sad history of the Pyrenean Ibex (Capra pyrenaica pyrenaica) is a powerful example of species loss due to causes related to human activity. DNA analyses of Pyrenean Ibex found evidence that, after a demographic expansion about 20,000 years ago, its population went through a bottleneck caused by hunting, inbreeding and other factors, which ultimately caused its extinction. Their research is published in the open-access, peer-reviewed journal Zoosystematics and Evolution.

*Only the French mountaineer and photographer Bernhard Clos managed to take a series of good photos of the Bucardo, as the Pyrenean Ibex is called on the Spanish side. Photo: Bernhard Clos*

Likely the first extinction event of the 2000s in Europe, the sad history of the Pyrenean Ibex (Capra pyrenaica pyrenaica) is a powerful example of the ever-increasing species loss worldwide due to causes related to human activity. It can, however, give us valuable information on what should be done (or avoided) to halt this extinction vortex.

The distribution of this subspecies of Iberian Ibex was limited to the French and Spanish Pyrenees. Its first mention in an official written document, dating back to 1767, already refers to it as extremely rare. Like many other mountain goats, it was almost hunted to extinction before its killing became prohibited in 1913. Neither the institution of a national park (Ordesa & Monte Perdido), nor a conservation project with European LIFE program funding could stop the extinction of the Pyrenean Ibex eventually officialised on January 6, 2000. But the story of this charismatic animal did not end there – a controversial cloning program was started instantly with no scientific agreement, nor support from regional environmental NGOs, claiming that de-extinction was possible even in the absence of further DNA studies.

Laña, the last surviving Pyrenean Ibex, returned as a mounted animal to Torla-Ordesa on the 6th November 2012 after its controversial cloning attempt. Her skin is now exhibited in the visitors centre of Ordesa & Monte Perdido National Park. Photo: Manolo Grasa

To find out more about the drivers of its extinction, an international team composed of 7 nationalities built a database of all known museum specimens and reconstructed the demographic history of the Pyrenean Ibex based on DNA evidence. Their research is published in the open-access, peer-reviewed journal Zoosystematics and Evolution.

The research found that after a population expansion between 14,000 and 29,000 years ago (which is quite recent from a genetic point of view), a significant loss of genetic diversity followed between approximately 15,000 and 7,500 years BP, and continued until present. By that time, the Pyrenean Ibex also lived outside the Pyrenean mountain chain, but, gradually, its distribution was reduced to only one valley in the Ordesa National Park in the Spanish Pyrenees.

*The adventures of the British hunter E.N. Buxton were published in 1893. This engraving represents a hunting party in the Ordesa Valley (Spanish Pyrenees).*

Written sources confirm hunting of the Pyrenean Ibex from as early as the 14th century, and during the 19th and 20th century it became a common target for trophy hunters. Undoubtedly, hunting played an important role in reducing its population numbers and distribution area, but it is not possible – with the information currently available – to pinpoint it as the straw that broke the camel’s back. Infectious diseases that originate from livestock (for instance, those caused by the bluetongue virus, BTV, and sarcopses) are capable of decimating other subspecies of Iberian Ibex in extremely short periods of time.

While the relative contribution of various factors remains largely unknown, it seems that hunting and diseases transmitted from other animals have been effective in drastically reducing the number of Pyrenean ibexes over the last two centuries, because they were acting on an already genetically weakened population. This low genetic diversity, combined with inbreeding depression and reduced fertility, brought the population beyond the minimum viable size – from that point onwards, extinction was inevitable.

This case study shows the importance of historical biological collections for genetic analyses of extinct species. A privately owned 140-year-old trophy preserved in Pau, France, was genotyped as part of this research, showing that private individuals may possess material of high value. As there is little knowledge of such resources, the authors call for the creation of an online public database of private collections hosting biological material for the benefit of biodiversity studies.

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Original source:
Forcina G, Woutersen K, Sánchez-Ramírez S, Angelone S, Crampe JP, Pérez JM, Fandos P, Granados JE, Jowers MJ (2021) Demography reveals populational expansion of a recently extinct Iberian ungulate. Zoosystematics and Evolution 97(1): 211-221. https://doi.org/10.3897/zse.97.61854

‘Insectageddon’ is ‘alarmist by bad design’: Scientists point out the study’s major flaws

*Many insects species require pristine environments, including old-growth forests. Photo by Atte Komonen.*

Earlier this year, a research article triggered a media frenzy by predicting that as a result of an ongoing rapid decline, nearly half of the world’s insects will be no more pretty soon

Amidst worldwide publicity and talks about ‘Insectageddon’: the extinction of 40% of the world’s insects, as estimated in a recent scientific review, a critical response was published in the open-access journal Rethinking Ecology.

Query- and geographically-biased summaries; mismatch between objectives and cited literature; and misuse of existing conservation data have all been identified in the alarming study, according to Drs Atte Komonen, Panu Halme and Janne Kotiaho of the University of Jyväskylä (Finland). Despite the claims of the review paper’s authors that their work serves as a wake-up call for the wider community, the Finnish team explain that it could rather compromise the credibility of conservation science.

The first problem about the paper, titled “Worldwide decline of the entomofauna: A review of its drivers” and published in the journal Biological Conservation, is that its authors have queried the Web of Science database specifically using the keywords “insect”, “decline” and “survey”.

“If you search for declines, you will find declines. We are not questioning the conclusion that insects are declining,” Komonen and his team point out, “but we do question the rate and extent of declines.”

*Many butterflies have declined globally. Scolitantides orion, for example, is an endangered species in Finland. Photo by Atte Komonen.*

The Finnish research team also note that there are mismatches between methods and literature, and misuse of IUCN Red List categories. The review is criticised for grouping together species, whose conservation status according to the International Union for Conservation of Nature (IUCN) is Data Deficient with those deemed Vulnerable. By definition, there are no data for Data Deficient species to assess their declines.

In addition, the review paper is seen to use “unusually forceful terms for a peer-reviewed scientific paper,” as the Finnish researchers quote a recent news story published in The Guardian. Having given the words dramatic, compelling, extensive, shocking, drastic, dreadful, devastating as examples, they add that that such strong intensifiers “should not be acceptable” in research articles.

“As actively popularising conservation scientists, we are concerned that such development is eroding the importance of the biodiversity crisis, making the work of conservationists harder, and undermining the credibility of conservation science,” the researchers explain the motivation behind their response.

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Original source:

Komonen A, Halme P, Kotiaho JS (2019) Alarmist by bad design: Strongly popularized unsubstantiated claims undermine credibility of conservation science. Rethinking Ecology 4: 17-19. https://doi.org/10.3897/rethinkingecology.4.34440

Museum collection reveals distribution of Carolina parakeet 100 years after its extinction

While 2018 marks the centenary of the death of the last captive Carolina parakeet – North America’s only native parrot, a team of researchers have shed new light on the previously known geographical range of the species, which was officially declared extinct in 1920.

Combining observations and specimen data, the new Carolina parakeet occurrence dataset, recently published in the open access Biodiversity Data Journal by Dr Kevin Burgio, , Dr Colin Carlson, University of Maryland and Georgetown University, and Dr Alexander Bond, Natural History Museum of London, is the most comprehensive ever produced.

The new study provides unprecedented information on the birds range providing a window into the past ecology of a lost species.

“Making these data freely available to other researchers will hopefully help unlock the mysteries surrounding the extinction and ecology of this iconic species. Parrots are the most at-risk group of birds and anything we can learn about past extinctions may be useful going forward,” says the study’s lead author, Kevin Burgio.

The observational recordings included in the study have been gleaned from a wide variety of sources, including the correspondence of well-known historical figures such as Thomas Jefferson and the explorers Lewis and Clark.

The study team referenced recorded sightings spanning nearly 400 years. The oldest recorded sighting dates back to 1564, and was found in a description of the current state of Florida written by Rene Laudonniere in 1602.

Alongside the written accounts, the researchers included location data from museum specimens. These include 25 bird skins from the Natural History Museum’s Tring site, whose skin collection is the second largest of its kind in the world, with almost 750,000 specimens representing about 95 per cent of the world’s bird species. Thereby, the study proves what invaluable resources museum collections can be.

“The unique combination of historical research and museum specimens is the only way we can learn about the range of this now-extinct species. Museums are archives of the natural world and research collections like that of the Natural History Museum are incredibly important in helping to increase our understanding of biodiversity conservation and extinction,” says Alex Bond.

“By digitising museum collections, we can unlock the potential of millions of specimens, helping us to answer some of today’s big questions in biodiversity science and conservation.”

It is hoped that this research will be the beginning of a wider reaching work that will explore further into the ecology of this long lost species.

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Original source:

Burgio KR, Carlson CJ, Bond AL (2018) Georeferenced sighting and specimen occurrence data of the extinct Carolina Parakeet (Conuropsis carolinensis) from 1564 – 1944. Biodiversity Data Journal 6: e25280. https://doi.org/10.3897/BDJ.6.e25280

The ‘Star dust’ wasp is a new extinct species named after David Bowie’s alter ego

During her study on fossil insects of the order Hymenoptera at China’s Capitol Normal University, student Longfeng Li visited the Smithsonian National Museum of Natural History, Washington, carrying two unidentified wasp specimens that were exceptionally well-preserved in Burmese amber. This type of fossilized tree resin is known for the quality of the fossil specimens which can be preserved inside it. Being 100 million years old, they provide an incredible view into the past.

The subsequent analysis of the specimens revealed that both represent species new to science. Furthermore, one of the wasps showed such amazing similarities to a modern group of wasps that it was placed in a currently existing genus, Archaeoteleiawhich has long been considered as an ancient lineage. The species are described in a study published in the open access Journal of Hymenoptera Research.

However, Archaeoteleia has changed since the times when the ancient wasp got stuck on fresh tree resin. The authors note that “a novice might not recognize the characters that unite the fossil with extant species”. For instance, the modern wasp species of the genus show visibly longer antennal segments and a different number of teeth on the mandible when compared to the fossil. In turn, the description of the new extinct species enhances the knowledge about living species by highlighting anatomical structures shared by all species within the genus.

This fossil wasp with living relatives received quite a curious name, Archaeoteleia astropulvis. The species name, astropulvis, translates from Latin to ‘star dust’. The discoverers chose the name to refer to both “the ancient source of the atoms that form our planet and its inhabitants”, as well as to commemorate the late David Bowie’s alter ego – Ziggy Stardust.

Unlike the Star dust wasp, the second new species belongs to a genus (Proteroscelio) known exclusively from Cretaceous fossils. Likewise, it is a tiny insect, measuring less than 2mm in length. It also plays an important role in taxonomy by expanding the anatomical diversity known from this extinct genus.

The authors conclude that their discovery, especially the Star dust wasp and its placement in an extant genus, where it is the only fossil species, “exemplifies the importance of understanding the extant fauna of a taxon to interpret fossils”.

“Such union of fossil and extant morphologies is especially illuminating and requires examination of both kinds of specimens,” they add.

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Original source:

Talamas EJ, Johnson NF, Buffington ML, Dong R (2016) Archaeoteleia Masner in the Cretaceous and a new species of Proteroscelio Brues (Hymenoptera, Platygastroidea). In: Talamas EJ, Buffington ML (Eds) Advances in the Systematics of Platygastroidea. Journal of Hymenoptera Research 56: 241-261. https://doi.org/10.3897/jhr.56.10388

New species of ground beetle described from a 147-year-old specimen

While new species are most commonly described based on recent field collections, undertaken at poorly explored places, some are identified in museum collections, where they have spent decades before being recognised as new to science. Such is the case of an unusually large and likely extinct ground beetle found at the Muséum national d’Histoire naturelle, Paris, whose story began in the distant 1860s with Dr. Eduard Graeffe’s trip to Samoa. Now, a century and a half later, the beetle is finally described by Dr. James K. Liebherr, Cornell University, USA, in the open access journal Zoosystematics and Evolution.

Much like the rest of the species within the genus, the beetle now going under the name Bryanites graeffi showed vestigial flight wings and other traits associated with flight-wing loss. However, at length of 16.2 mm it is the largest for the taxonomic group it is now assigned to. Although this may seem way too obvious for taxonomists to overlook, the beetle’s relatives are just as obscure. The Bryanites genus was previously known from two species represented by two specimens only, collected in 1924 from Savai?i Island by Edwin H. Bryan, Jr., Bernice P. Bishop Museum in Honolulu, during the Bishop Museum’s Whitney South Seas Expedition.

As a result, we now have three species representing an evolutionary radiation in Samoa, all known from single specimens collected long ago. The phylogenetics of these three species link them to other groups from Fiji and New Zealand.

What is the advantage of knowledge about species that existed some 90-150 years ago, but no longer? It might actually point us to the actual level of impact mankind has on natural ecosystems. The cause of the likely extermination of Bryanites graeffi might never be known with certainty, however, the colonization of many Pacific islands by the Polynesian rat has always been followed by the diminution or elimination of native insect species. Thus, we can add another likely victim to the list of species that have been adversely impacted by mankind’s commensal voyagers.

The species bears the name of its original collector to pay tribute to Dr. Graeffe and his hard work while collecting insects in the rain forest of Samoa well over a century ago .

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Original source:

Liebherr JK (2017) Bryanites graeffii sp. n. (Coleoptera, Carabidae): museum rediscovery of a relict species from Samoa. Zoosystematics and Evolution 93(1): 1-11. https://doi.org/10.3897/zse.93.10802