A new study published in June reveals that fragmented communication and coordination undermine the effectiveness of Europe’s leading biodiversity research infrastructures (BioRIs). The research led by Allan T. Souza, Tomáš Martinovič, Carrie Andrew, Yi-Ming Gan, and Erik Kusch, examined the communication strategies of four major European BioRIs, uncovering issues that hinder scientific collaboration and data integration across the continent.
BioRIs address the complex challenges in biodiversity research, scientific collaboration across disciplines and national boundaries, and inform the public and policymakers about the status and challenges of the European biodiversity. The new study focusing on the communication and coordination amongst BioRIs revealed issues in communication strategies of the key European BioRIs, including DiSSCo, eLTER, GBIF and LifeWatch ERIC.
Conceptual representation of the Biodiversity Digital Twin (BioDT) with the integration of the four research infrastructures (DiSSCo, eLTER, GBIF and LifeWatch ERIC) involved in the development of the digital twin.
The study revealed uneven geographical representation, inconsistent communication practices, and limited data and service cohesion, ultimately impeding collaboration and efficient resource use. The distribution of BioRIs across Europe is imbalanced, leading to unequal research opportunities and capacities between regions. While communication within individual BioRIs is often strong, collaboration between infrastructures remains limited. The absence of shared tools and standard communication channels severely hampers joint efforts and information flow. The study found no standardised approach to communication methods among BioRIs, creating confusion for stakeholders and reducing transparency and accessibility for scientists, policymakers, and the public. Variations in data standards across infrastructures hinder data integration. While some infrastructures share common standards, others maintain highly specialised protocols, restricting broader collaboration and data use. Although some initiatives show promise for harmonisation, broader systemic challenges persist.
Distribution and representation of European Biodiversity Research Infrastructures is fragmented (A), with each individual research infrastructure differing in its geographical coverage (B).
“Our findings highlight a critical need for a unified communication framework to break down barriers between these infrastructures,” said lead author Allan T. Souza. “Without it, we risk missing opportunities for impactful, cross-disciplinary research vital to tackling Europe’s and the world’s biodiversity challenges.” While some initiatives to tackle this issue demonstrate the potential for harmonisation, the broader systemic challenges persist.
Self-reported collaboration intensity within and between four biodiversity research infrastructures (BioRIs). Upper panel: Collaboration of all BioRIs (DiSSCo, eLTER, GBIF and LifeWatch) are largely siloed, with minimal interaction across BioRIs being reported. Lower panel: Across BioRI, collaboration is uniformly low (left), while within BioRI, collaboration varies, with LifeWatch and eLTER showing the highest intensity (right). These patterns highlight limited cross BioRI integration and variable internal cohesion, highlighting the fragmented scenario in the BioRI landscape.
To overcome these barriers, the study argues for these urgent steps. The first one recommends a standardised communication framework. Creating a shared platform with tools for chat, mailing, discussion boards, calendars, and clear public and internal information separation. Another recommendation is to increase geographical coverage that proposes long-term balancing of BioRI representation across Europe through coordinated funding and capacity sharing. The authors also suggest promoting data interoperability, while harmonising standards and deepening understanding of cross-domain differences to improve integration. And last but not least, it is important to leverage good practice examples.
Envisioned solution/tool architecture for the Biodiversity Research Infrastructures (BioRIs) communication and coordination, showing pages in columns and individual components of the solution/tool. Green components are publicly available, orange one are available to everyone after they login to the system and red ones are available only to the members of the given group. At the bottom are Github repositories where the relevant information for given web page are stored.
Addressing fragmentation within European BioRIs requires improving communication, coordination, and interoperability through both technical and institutional measures. Strategic funding, shared platforms, and community engagement will be key to building a more integrated and efficient research network. The study highlights that changes should be gradual, systematic, and informed by proven models of collaboration.
Research article:
Souza A, Martinovič T, Andrew C, Gan Y-M, Kusch E (2025) Fragmented Networks: Challenges in communication and cohesion of European Biodiversity Research Infrastructures. Biodiversity Data Journal 13: e148079. https://doi.org/10.3897/BDJ.13.e148079
The FAIR Data Place – the key and final product of the partnership – is meant to provide scientists with all types of biodiversity data “at their fingertips”
The Horizon 2020 – funded project BiCIKL has reached its halfway stage and the partners gathered in Plovdiv (Bulgaria) from the 22nd to the 25th of October for the Second General Assembly, organised by Pensoft.
The BiCIKL project will launch a new European community of key research infrastructures, researchers, citizen scientists and other stakeholders in the biodiversity and life sciences based on open science practices through access to data, tools and services.
BiCIKL’s goal is to create a centralised place to connect all key biodiversity data by interlinking 15 research infrastructures and their databases. The 3-year European Commission-supported initiative kicked off in 2021 and involves 14 key natural history institutions from 10 European countries.
BiCIKL is keeping pace as expected with 16 out of the 48 final deliverables already submitted, another 9 currently in progress/under review and due in a few days. Meanwhile, 21 out of the 48 milestones have been successfully achieved.
Prof. Lyubomir Penev (BiCIKL’s project coordinator Prof. Lyubomir Penev and CEO and founder of Pensoft) opens the 2nd General Assembly of BiCIKL in Plovdiv, Bulgaria.
The hybrid format of the meeting enabled a wider range of participants, which resulted in robust discussions on the next steps of the project, such as the implementation of additional technical features of the FAIR Data Place (FAIR being an abbreviation for Findable, Accessible, Interoperable and Reusable).
This FAIR Data Place online platform – the key and final product of the partnership and the BiCIKL initiative – is meant to provide scientists with all types of biodiversity data “at their fingertips”.
This data includes biodiversity information, such as detailed images, DNA, physiology and past studies concerning a specific species and its ‘relatives’, to name a few. Currently, the issue is that all those types of biodiversity data have so far been scattered across various databases, which in turn have been missing meaningful and efficient interconnectedness.
Additionally, the FAIR Data Place, developed within the BiCIKL project, is to give researchers access to plenty of training modules to guide them through the different services.
Halfway through the duration of BiCIKL, the project is at a turning point, where crucial discussions between the partners are playing a central role in the refinement of the FAIR Data Place design. Most importantly, they are tasked with ensuring that their technologies work efficiently with each other, in order to seamlessly exchange, update and share the biodiversity data every one of them is collecting and taking care of.
By Year 3 of the BiCIKL project, the partners agree, when those infrastructures and databases become efficiently interconnected to each other, scientists studying the Earth’s biodiversity across the world will be in a much better position to build on existing research and improve the way and the pace at which nature is being explored and understood. At the end of the day, knowledge is the stepping stone for the preservation of biodiversity and humankind itself.
The Biodiversity Knowledge Hub is no longer existing on paper only! We are opening the 2nd day of the #BiCIKL_H2020 General Assembly looking at the prototype of the BKH created by the @LifeWatchERIC team. It's so exciting to see projects taking shape! 🤩 #Plovdivpic.twitter.com/RidzwBpxZx
“Needless to say, it’s an honour and a pleasure to be the coordinator of such an amazing team spanning as many as 14 partnering natural history and biodiversity research institutions from across Europe, but also involving many global long-year collaborators and their infrastructures, such as Wikidata, GBIF, TDWG, Catalogue of Life to name a few,”
said BiCIKL’s project coordinator Prof. Lyubomir Penev, CEO and founder of Pensoft.
“I see our meeting in Plovdiv as a practical demonstration of our eagerness and commitment to tackle the long-standing and technically complex challenge of breaking down the silos in the biodiversity data domain. It is time to start building freeways between all biodiversity data, across (digital) space, time and data types. After the last three days that we spent together in inspirational and productive discussions, I am as confident as ever that we are close to providing scientists with much more straightforward routes to not only generate more biodiversity data, but also build on the already existing knowledge to form new hypotheses and information ready to use by decision- and policy-makers. One cannot stress enough how important the role of biodiversity data is in preserving life on Earth. These data are indeed the groundwork for all that we know about the natural world”
Prof. Lyubomir Penev added.
Christos Arvanitidis (CEO of LifeWatch ERIC) at the 2nd General Assembly of the BiCIKL project.
“The point is: do we want an integrated structure or do we prefer federated structures? What are the pros and cons of the two options? It’s essential to keep the community united and allied because we can’t afford any information loss and the stakeholders should feel at home with the Project and the Biodiversity Knowledge Hub.”
Joe Miller, Executive Secretary and Director at GBIF, commented:
“We are a brand new community, and we are in the middle of the growth process. We would like to already have answers, but it’s good to have this kind of robust discussion to build on a good basis. We must find the best solution to have linkages between infrastructures and be able to maintain them in the future because the Biodiversity Knowledge Hub is the location to gather the community around best practices, data and guidelines on how to use the BiCIKL services… In order to engage even more partners to fill the eventual gaps in our knowledge.”
Joana Pauperio (biodiversity curator at EMBL-EBI) atthe 2nd General Assembly of the BiCIKL project.
“BiCIKL is leading data infrastructure communities through some exciting and important developments”
said Dr Guy Cochrane, Team Leader for Data Coordination and Archiving and Head of the European Nucleotide Archive at EMBL’s European Bioinformatics Institute (EMBL-EBI).
“In an era of biodiversity change and loss, leveraging scientific data fully will allow the world to catalogue what we have now, to track and understand how things are changing and to build the tools that we will use to conserve or remediate. The challenge is that the data come from many streams – molecular biology, taxonomy, natural history collections, biodiversity observation – that need to be connected and intersected to allow scientists and others to ask real questions about the data. In its first year, BiCIKL has made some key advances to rise to this challenge,”
“As a partner, we, at the Biodiversity Information Standards – TDWG, are very enthusiastic that our standards are implemented in BiCIKL and serve to link biodiversity data. We know that joining forces and working together is crucial to building efficient infrastructures and sharing knowledge.”
The project will go on with the first Round Table of experts in December and the publications of the projects who participated in the Open Call and will be founded at the beginning of the next year.
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Learn more about BiCIKL on the project’s website at: bicikl-project.eu
