The conference facilitated valuable networking opportunities, meeting us with old friends but also giving us a chance to discuss potential future collaborations.
Between 30 June and 3 July, Pensoft’s team attended the LifeWatch ERIC Biodiversity & Ecosystem eScience Conference (BEeS) in Heraklion, Greece. The event was organized by the LifeWatch ERIC Infrastructure with the aim of tackling the Triple Planetary Crisis (climate change, biodiversity loss, and pollution) through eScience and European Research Infrastructures (RIs). With almost 200 registered participants, the conference discussed “how cutting-edge eScience and European Research Infrastructures can work together to develop innovative solutions for a sustainable future.”
Hosted by the Hellenic Centre for Marine Research, BEeS convened 193 registrants, featured 59 presentations, 36 posters, and provided 12 training sessions, highlighting the vital role of technology, data, and collaborative efforts in confronting global environmental challenges.
On the first day, a closed-door meeting was held with the aim of adopting a Declaration of Intent (the Crete Declaration) between the involved RIs, e-infrastructures, EU-relevant projects, and Pensoft, as a scientific publisher. The objective was to advance the One Health approach—a strategy that optimizes the health of people, animals, and ecosystems. The Declaration outlines four key strategic commitments:
strengthening strategic collaboration
advancing data integration and FAIR (Findable, Accessible, Interoperable, Reusable) principles
supporting Open Science Ecosystems
informing policy and practice
Christos Arvanitidis, the president of LifeWatch ERIC, came to the Pensoft stand to meet with our staff and discuss our agenda.
Pensoft was also invited to present the outcomes of the BiCIKL project, on which we partnered with LifeWatch ERIC, as part of the Mapping Life on Planet Earth: Biogeography in a Changing World session.
The indexing is one of the major outcomes from the partnerships within the Horizon 2020-funded project Biodiversity Community Integrated Knowledge…
Teodor Georgiev, Chief Technology Officer of Pensoft, delivered the presentation, titled The BiCIKL project traverses obstacles to FAIR and linked biodiversity data usage.
The BiCIKL project, which concluded on 30 April 2024, aims to catalyse the culture change in the way biodiversity data are identified, linked, integrated and re-used across the research lifecycle. Key outcomesinclude the creation of uni- and bi-directional links between biodiversity RIs, the establishment of best practices for Persistent Identifiers (PIDs), recommendations for interoperability between RIs, and the development of automated tools and workflows for published data liberation and FAIR-isation. The presentation also introduced the Biodiversity Knowledge Hub, a one-stop portal for understanding the complex, but increasingly interconnected landscape of biodiversity RIs.
Georgiev also delivered a poster presentation, discussing SOLO: a collaborative open-review and publishing platform supporting the EU Soil Mission.
SOLO, a Horizon Europe project in which Pensoft is involved, aims to identify current knowledge gaps, drivers, bottlenecks, and novel research and innovation approaches to be considered in the European Soil Mission research and innovation roadmap. Hosted on Pensoft’s ARPHA publishing platform and integrating the ARPHA Writing Tool, SOLO engages researchers, practitioners, citizens and other stakeholders in the development and review of ‘living’ open-access documents supporting the EU Mission “A Soil Deal for Europe.” Pensoft’s contribution to SOLO encompasses communication, dissemination, data management, and the crucial development of the platform itself.
Fifteen research infrastructures and 15 projects were officially represented at BEes, including two other Horizon Europe projects where Pensoft is a partner: ANERIS, which focuses on scientific tools and methods for marine life-sensing and monitoring, and BMD, which offers a single access point to high-throughput biodiversity monitoring tools.
Pensoft joins the ANERIS consortium as an expert in science communication with the goal to engage stakeholders and build an active community…
Berta Companys of the Spanish National Research Council introduced ANERIS with an insightful presentation on the project’s innovative technologies, workflow, and overall approach. Her talk highlighted the key challenges connected to marine biodiversity and monitoring sea and ocean ecosystems that ANERIS is tackling and outlined the solutions the project is developing to address them, such as the implementation of Operational Marine Biology (OMB) data products.
The conference facilitated valuable networking opportunities, meeting us with old friends but also giving us a chance to discuss potential future collaborations. Pensoft engaged with partners from other European Research Infrastructures, sharing a dedication to collaborative research and the development of open-access resources addressing global environmental challenges.
Official group photo of the delegates at ESP11 (Darwin, Australia). Courtesy of the Ecosystem Services Partnership.
Between 22nd and 26th June, the 11th Ecosystem Services Partnership World Conference (ESP11) brought about 250 international delegates from diverse backgrounds: professional and demographic alike, to the Darwin Convention Centre in the capital city of the Northern Territory, Australia.
Amongst the central topics of the event were the integrations of local and indigenous values and knowledge into the understanding of ecosystem services and their sustainable management; the implementation of nature-based solutions into practice; and the collaboration of scientists with policymakers, practitioners and other stakeholders.
Cultural diversity was specially celebrated at both the opening and the closing ceremonies, as well as the special conference dinner. Attendees enjoyed multiple traditional performances from the region, but also from other parts of the world. They also had the chance to hear directly from members of Darwin’s indigenous communities about their own perspectives on ecosystem services and their sustainable management.
Indigenous Australian performance at the opening ceremony at ESP11 (Darwin, Australia).
During the week, each day would open with keynote speeches by renowned scientists from around the world. The programme would then continue with a set of six parallel sessions. The conference also included poster sessions, a conference dinner and field trips meant to provide the conference participants with a face-to-face encounter with Australian natural phenomena, including close-up encounters with the signature Northern Territory fauna, such as crocodiles, birds and sea turtles.
One of the field trips took participants to the uninhabited Bare Sand Island where they got the chance to see up close a Flatback sea turtle coming out of the water, making her nest and laying her eggs before making her way back to the waves under the cover of the night.
At the Pensoft stand, delegates met Pensoft’s Head of Journal development and PR: Iva Boyadzhieva, who would answer their questions about the various publishing opportunities and scholarly resources by the publisher, but also about the latest activities and results of the Horizon Europe-funded project SELINA (an acronym for Science for Evidence-based and Sustainable Decisions about Natural Capital).
Pensoft’s stand at the ESP11 conference in Darwin, Australia.
Having started in 2022 and set to run until 2027, SELINA comprises 50 partner organisations coordinated by the Leibniz University Hannover and Prof. Dr. Benjamin Burkhard (Leibniz University Hannover, Germany), who is also co-Chair of the ESP and Editor-in-Chief of the One Ecosystem journal. As an experienced science communicator and open-science publisher, at SELINA, Pensoft has been assigned to lead the project’s communication and dissemination activities.
The transdisciplinary project aims to provide smart, cost-effective, and nature-based solutions to historic societal challenges, such as climate change, biodiversity loss, and food security. One of the consortium’s main objectives is to identify biodiversity, ecosystem condition, and ecosystem service factors that can be successfully integrated into decision-making processes in both the public and private sectors.
Most recently, the consortium launched SELINA’s Communities of Practice initiative to promote collaborative learning and knowledge integration across Europe. This digital platform provides a forum for scientists, policymakers, practitioners, and business representatives to exchange knowledge and further engage with its real-life application. On the Communities of Practice, visitors may explore how SELINA is driving change across Europe.
Once again, all around the venue one could easily catch a glimpse of both local and exotic biodiversity that had taken cover on the laptops of the participants. The vivid stickers have become a signature Pensoft freebies that feature scientific illustration of species discussed in publications from across the publisher’s scholarly portfolio in a nod to the authors who have chosen a journal from the Pensoft scholarly portfolio.
Those who have missed the opportunity to sign up for those journals’ newsletters at the stand, can do this by filling in their email address from the homepage of the journal they fancy or by updating their profiles in the Pensoft system.
Understandably, the highlight in the Pensoft’s journal portfolio for ESP11 delegates was One Ecosystem, which was once born in a collaboration between Pensoft, the predecessor of SELINA: ESMERALDA, and the ESP community itself.
Since its launch in 2016, the open-access peer-reviewed journal has published about 200 research papers, including field-specific research outputs typically falling outside of what traditional scientific journals would see as a publication. These include Software description, Methods, Ecosystem Services Mapping, Ecosystem Accounting Table amongst others. You can find about the origins of One Ecosystem in the 2016 launching editorial. A few years ago, the journal became part of the scholarly literature databases of both Scopus and Web of Science. In fact, the latest Scopus CiteScore of One Ecosystem places the journal in Q1 in all five categories it has been assigned to.
At a special session within the ESP11 programme, Editor-in-Chief Prof. Dr. Benjamin Burkhard welcomed various questions concerning the One Ecosystem journal.
As part of the ESP11 programme, a session dedicated on the open-science approach of One Ecosystem that relies on opening up diverse research outputs and data, in order to prompt transparency, reusability and interdisciplinary in ecological research. Together, Pensoft’s Iva Boyadzhieva, Editor-in-Chief Prof. Dr. Benjamin Burkhard and subject editor Dr. Paulo Pereira talked about the journal and addressed the questions of the audience, while also providing general advice on scholarly publishing and editorial work to early career researchers at the session.
The session also presented the announcement that in 2025, ESP members are eligible for a 10% discount on the APC at One Ecosystem.
As usual, the conference closed with an engaging and heart-warming ceremony, where the organisers paid another tribute to local communities and volunteers who made the event an unforgettable experience for everyone. The ceremony finished with the awards for the three best posters presented at ESP11.
Hamid Arrum Harahap was awarded first place for his poster “Ecosystem-Based Adaptation (EbA) to Climate Change for Indigenous Women in the Mentawai Islands and Aceh Singkil, Sumatra (Indonesia)”.
Hamid Arrum Harahap (Universitas Andalas, Indonesia), Nicole Boyd (Charles Darwin University) and Gail Sucharitakul (Imperial College of London, United Kingdom) were recognised for their research posters.
“My poster highlights the climate knowledge of Indigenous women in the Mentawai Islands and Aceh Singkil. Their voices are often underrepresented in climate discourse, despite contributing the least to climate change and being among the most affected by its impacts”
said first-place sitter Hamid Arrum Harahap about his poster, titled “Ecosystem-Based Adaptation (EbA) to Climate Change for Indigenous Women in the Mentawai Islands and Aceh Singkil, Sumatra (Indonesia)”.
“In regions where downscaling climate models is difficult, intergenerational knowledge passed through indigenous women is critical. Our study highlights that while our climate models from modern science are built on numbers and projections, Indigenous women’s climate memories are rooted in stories and emotions—together, they offer complementary insights for understanding and adapting to climate change.”
In addition to the prizes handed by the ESP, he received a waiver for a free publication at One Ecosystem from the journal’s publisher Pensoft.
“I plan to use this opportunity to publish my research on Indigenous knowledge and ecosystem services. I am currently working on two studies: one on the relational values of ecosystem services governance with Indigenous Batak communities, and the other on ecosystem-based adaptation and the vulnerability of ecosystem services to climate change, focusing on Indigenous women in Sumatra and Far North Queensland, Australia. I believe One Ecosystem is an ideal platform for this work, as it offers an innovative and accessible forum for multidisciplinary studies like mine and focusing on sustainability of the ecosystem.
he added.
Third-placed Gail Sucharitakul received a copy of “Mapping Ecosystem Service”: a best-seller in Pensoft’s scientific book portfolio, edited by Prof. Dr. Benjamin Burkhard and Dr. Joachim Maes (European Commission DG Environment): both well-renowned in the field and the ESP community scientists. Maes is also a Deputy Editor-in-Chief at One Ecosystem.
Now that the ESP11 World Conference has turned into a wonderful memory, we set our sights on the 2016 European conference, which will be taking place in historic Prague, Czech Republic. See you there!
On Monday, 28 April, the first day of the European Geosciences Union General Assembly 2025 (EGU 2025), participants had the chance to discover one of the most promising initiatives in biodiversity informatics: the Biodiversity Knowledge Hub (BKH). BKH was presented as part of a dedicated poster session, titled “Biodiversity Knowledge Hub: Addressing the impacts of environmental change by linking Research Infrastructures, Global Aggregators and Community Networks“.
Understanding and addressing the impacts of environmental change on biodiversity and ecosystems demands access to reliable FAIR data (as in Findable, Accessible, Interoperable, Reusable). However, the current landscape is often fragmented, making it difficult to combine and use these resources effectively.
Enter the Horizon-funded project Biodiversity Community Integrated Knowledge Library (BiCIKL): a pioneering initiative that demonstrates the transformative power of interdisciplinary collaboration. Coordinated by Pensoft, BiCIKL ran between 2021 and 2024.
Within BiCIKL, 14 European institutions from ten countries teamed up with the aim to integrate biodiversity data across research infrastructures, scientific repositories, and expert communities.
Through this integration, BiCIKL bridged the gap between isolated knowledge systems and delivered actionable insights to guide conservation and resilience efforts. The project embodies the principles of open science by demonstrating how interdisciplinary collaboration can turn fragmented data into cohesive, usable knowledge for researchers, policymakers, and practitioners.
At the heart of BiCIKL’s success is the Biodiversity Knowledge Hub (BKH): an innovative platform that provides seamless access to biodiversity data, tools, and workflows. The BKH fosters interoperability between diverse resources, thus making it easier to combine information from different sources. Whether for advanced research analytics or policymaking in support of sustainable development, the BKH empowers users with tools tailored to their needs.
A few of the standout features of the BKH include:
Modular design to allow continuous expansion and adaptability to new challenges in biodiversity and climate resilience
Interoperable systems that connect a variety of databases, repositories, and services to deliver integrated knowledge.
Community building by welcoming a broad network of stakeholders to ensure the platform’s long-term sustainability and growth.
Watch the Biodiversity Knowledge Hubvideo on YouTube.
Setting a New Benchmark in Biodiversity Informatics
Through its collaborative approach, BiCIKL set a new standard for how biodiversity and climate resilience initiatives can be harmonised globally. By showcasing best practices in data integration, capacity building, and stakeholder engagement, BiCIKL became much more than a project: it turned into a blueprint for future biodiversity knowledge infrastructures.
The Biodiversity Knowledge Hub serves to demonstrate how harmonised standards and active collaboration are key to unlocking the full potential of biodiversity data. In doing so, its mission is to create scalable, long-term solutions that are crucial for addressing today’s pressing environmental challenges.
The poster presentation at EGU25 outlined the methodologies and technologies driving the BKH, emphasizing its role as a pioneering model for integrated biodiversity knowledge and action. As environmental pressures continue to mount, the work of BiCIKL and the Biodiversity Knowledge Hub offers a hopeful path forward—one where knowledge flows freely, collaborations flourish, and data-driven solutions guide our way to a more resilient future.
Visit the Biodiversity Community Integrated Knowledge Library (BiCIKL) project’s website at: https://bicikl-project.eu/.
Large-scale ground-mounted solar parks are relatively new phenomena. Over time, ideas have been put forward about how they can accommodate biodiversity, and some parks are indeed becoming more multifunctional, for example by providing habitats for plants, invertebrates and birds. From a background of studying idyllic ecosystems in dynamic change, Dr. Markus Zaplata, research technician at Anhalt University of Applied Sciences, Germany, has come to appreciate the biology of solar parks, and has found evidence that they can support a wide range of biodiversity.
Biodiversity in solar parks is a given (here two Mantis religiosa nymphs) and, with the possible exception of self-seeded woody plants, is desirable. Photo by Dr Markus Zaplata
His research, published in the open-access journal One Ecosystem, proves the previously overlooked fact that vegetation succession also takes place in solar parks, and that certain intrinsic technical structures can even help self-seeded woody plants live there. Vegetation succession refers to the directional development from easily spreading but low-competitive species such as herbs and grasses towards highly competitive species such as woody plants. Mowing alone is not enough to deal with woody plants, he argues. “The fact is that subsurface woody structures continue to grow after mowing, and may at some point massively interfere with the solar installations”, he says.
With 18 years of experience in studying vegetation succession, Dr. Zaplata has supported a research project on biodiversity in solar parks since 2021.
“I do the mowing myself, so I experience the very things I write about in this paper”, he says.
Mowing can also be expensive and labour-intensive, he adds, suggesting that other construction methods and grazing could provide a more sustainable alternative.
Including insights from succession research can make global solar energy landscapes more sustainable, he argues. “The universal and unstoppable ecological process of succession is here linked to a management recommendation that can bring society closer again, on the new or neutral territory of new energy landscapes. In fact, new and old professions are connected, for example solar park manager and livestock farmer.”
Above-ground parts of a willow tree (Salix sp.) that have resisted a recent mowing campaign. Photo by Dr Markus Zaplata
“Finally, and very importantly, my article points out that experts with in-depth predictive knowledge of dynamic vegetation processes must be consulted in the future on everything that has to do with the technical transformation of landscape units, including solar parks,” he says in conclusion.
Original source
Zaplata M (2025) Management and sustainability of ground-mounted solar parks requires consideration of vegetation succession as an omnipresent process. One Ecosystem 10: e141583. https://doi.org/10.3897/oneeco.10.e141583
Yet another hectic year has passed for our team at Pensoft, so it feels right to look back at the highlights from the last 12 months, as we buckle up for the leaps and strides in 2025.
In the past, we have used the occasion to take you back to the best moments of our most popular journals (see this list of 2023 highlights from ZooKeys, MycoKeys, PhytoKeys and more!); share milestones related to our ARPHA publishing platform (see the new journals, integrations and features from 2023); or let you reminisce about the coolest research published across our journals during the year(check out our Top 10 new species from 2021).
In 2022, when we celebrated our 30th anniversary on the academic scene, we extended our festive spirit throughout the year as we dived deep into those fantastic three decades. We put up Pensoft’s timeline and finished the year with a New Species Showdown tournament, where our followers on (what was back then) Twitter voted twice a week for their favourite species EVER described on the pages of our taxonomic journals.
Spoiler alert: we will be releasing our 2024 Top 10 New Species on Monday, 23 December, so you’d better go to the right of this screen and subscribe to our blog!
As we realised we might’ve been a bit biased towards our publishing activities over the years, this time, hereby, we chose to present you a retrospection that captures our best 2024 moments from across the departments, and shed light on how the publishing, technology and project communication endeavours fit together to make Pensoft what it is.
In truth, we take pride in being an exponentially growing family of multiple departments that currently comprises over 60 full-time employees and about a dozen freelancers working from all corners of the world, including Australia, Canada, Belgium and the United Kingdom. Together, we are all determined to make sure we continuously improve our service to all who have trusted us: authors, reviewers, editors, client journals, learned societies, research institutions, project consortia and other external collaborators.
After all, great deeds are only possible when you team up with great like-minded people!
In 2024, at Pensoft, we were hugely pleased to see a significant growth in the published output at almost all our journals, including record-breaking numbers in both submissions and publications at flagship titles of ours, including the Biodiversity Data Journal, PhytoKeys and MycoKeys.
Later in 2024, our colleagues, who work together with our clients to ensure their journals comply with the requirements of the top scholarly databases before they apply for indexation, informed us that another two journals in our portfolio have had their applications to Clarivate’s Web of Science successfully accepted. These are the newest journal of the International Association of Vegetation Science: Vegetation and Classification, and Metabarcoding and Metagenomics: a journal we launched in 2017 in collaboration with a team of brilliant scientists working together at the time within the DNAquaNet COST Action.
In 2024, we also joined the celebrations of our long-time partners at the Museum für Naturkunde Berlin, whose three journals: Zoosystematics and Evolution, Deutsche Entomologische Zeitschrift and Fossil Record are all part of our journal portfolio. This year marked the 10th Open Access anniversary of the three journals.
In the meantime, we also registered a record in new titles either joining the Pensoft portfolio or opting for ARPHA Platform’s white-label publishing solution, where journal owners retain exclusivity for the publication of their titles, yet use ARPHA’s end-to-end technology and as many human-provided services as necessary.
Pensoft’s CEO and founder Prof. Dr. Lyubomir Penev with Prof. Dr. Marc Stadler, Editor-in-Chief of IMA Fungus and President of the International Mycological Association at the Pensoft booth at the 12th International Mycological Congress (August, the Netherlands).
Amongst our new partners are the International Mycological Association who moved their official journal IMA Fungus to ARPHA Platform. As part of Pensoft’s scholarly portfolio, the renowned journal joins another well-known academic title in the field of mycology: MycoKeys, which was launched by Pensoft in 2011. The big announcement was aptly made public at this year’s 12th International Mycological Congress where visitors of the Pensoft stand could often spot newly elected IMA President and IMA Fungus Chief editor: Marc Stadler chatting with our founder and CEO Lyubomir Penev by the Pensoft/MycoKeys booth.
On our end, we did not stop supporting enthusiastic and proactive scientists in their attempt to bridge gaps in scientific knowledge. In January, we launched the Estuarine Management and Technologies journal together with Dr. Soufiane Haddout of the Ibn Tofail University, Morocco.
Later on, Dr. Franco Andreone (Museo Regionale di Scienze Naturali, Italy) sought us with the idea to launch a journal addressing the role of natural history museums and herbaria collections in scientific progress. This collaboration resulted in the Natural History Collections and Museomics journal, officially announced at the joint TDWG-SPNHC conference in Okinawa, Japan in August.
Around this time, we finalised our similarly exciting journal project in partnership with Prof. Dr. Volker Grimm (UFZ, Germany), Prof. Dr. Karin Frank (UFZ, Germany), Prof. Dr. Mark E. Hauber (City University of New York) and Prof. Dr. Florian Jeltsch (University of Potsdam, Germany). The outcome of this collaboration is called Individual-based Ecology: a journal that aims to promote an individual-based perspective in ecology, as it closes the knowledge gap between individual-level responses and broader ecological patterns.
The three newly-launched journals are all published under the Diamond Open Access model, where neither access, nor publication is subject to charges.
As you can see, we have a lot to be proud of in terms of our journals. This is also why in 2024 our team took a record number of trips to attend major scientific events, where we got the chance to meet face-to-face with long-time editors, authors, reviewers and readers of our journals. Even more exciting was meeting the new faces of scientific research and learning about their own take on scholarship and academic journals.
Pensoft’s CEO and founder Prof. Dr. Lyubomir Penev welcomed editors at PhytoKeys to the Pensoft-PhytoKeys-branded booth at the XX International Botanical Congress in July 2024 (Spain).
We cannot possibly comment on Pensoft’s tech progress in 2024 without mentioning the EU-funded project BiCIKL (acronym for Biodiversity Community Integrated Knowledge Library) that we coordinated for three years ending up last April.
This 36-month endeavour saw 14 member institutions and 15 research infrastructures representing diverse actors from the biodiversity data realm come together to improve bi-directional links between different platforms, standards, formats and scientific fields.
Following these three years of collaborative work, we reported a great many notable research outputs from our consortium (find about them in the open-science project collection in the Research Ideas and Outcomes journal, titled “Towards interlinked FAIR biodiversity knowledge: The BiCIKL perspective”) that culminated in the Biodiversity Knowledge Hub: a one-stop portal that allows users to access FAIR and interlinked biodiversity data and services in a few clicks; and also a set of policy recommendations addressing key policy makers, research institutions and funders who deal with various types of data about the world’s biodiversity, and are thereby responsible to ensuring there findability, accessibility, interoperability and reusability (FAIR-ness).
Apart from coordinating BiCIKL, we also worked side-by-side with our partners to develop, refine and test each other’s tools and services, in order to make sure that they communicate efficiently with each other, thereby aligning with the principles of FAIR data and the needs of the scientific community in the long run.
During those three years we made a lot of refinements to our OpenBiodiv: a biodiversity database containing knowledge extracted from scientific literature, built as an Open Biodiversity Knowledge Management System, and our ARPHA Writing Tool. The latter is an XML-based online authoring environment using a large set of pre-formatted templates, where manuscripts are collaboratively written, edited and submitted to participating journals published on ARPHA Platform. What makes the tool particularly special is its multiple features that streamline and FAIRify data publishing as part of a scientific publication, especially in the field of biodiversity knowledge. In fact, we made enough improvements to the ARPHA Writing Tool that we will be soon officially releasing its 2.0 version!
OpenBiodiv – The Open Biodiversity Knowledge Management System
ARPHA Writing Tool 2.0
Amongst our collaborative projects are the Nanopublications for Biodiversity workflow that we co-developed with KnowledgePixels to allow researchers to ‘fragment’ their most important scientific findings into machine-actionable and machine-interpretable statements. Being the smallest units of publishable information, these ‘pixels of knowledge’ present an assertion about anything that can be uniquely identified and attributed to its author and serve to communicate a single statement, its original source (provenance) and citation record (publication info).
Nanopublications for Biodiversity
In partnership with the Swiss-based Text Mining group of Patrick Ruch at SIB and the text- and data-mining association Plazi, we brought the SIB Literature Services (SIBiLS) database one step closer to solidifying its “Biodiversity PMC” portal and working title.
Understandably, we spent a lot of effort, time and enthusiasm in raising awareness about our most recent innovations, in addition to our long-standing workflows, formats and tools developed with the aim to facilitate open and efficient access to scientific data; and their integration into published scholarly work, as well as receiving well-deserved recognition for their collection.
We just can’t stress it enough how important and beneficial it is for everyone to have high-quality FAIR data, ideally made available within a formal scientific publication!
🗨️Imagine if ALL these links were provided as hyperlinks within a #scholarly publication!
Pensoft’s CTO Teodor Georgiev talks about innovative methods and good practices in the publication of biodiversity data in scholarly papers at the First national meeting of the Bulgarian Barcode of Life (BgBOL) consortium (December, Bulgaria).
🤔What is a Data Paper?
👍 A means to describe a #dataset – like the ones on @GBIF – in a standardised, widely accepted #scientific article format.
👇🧵Highlights from @LyuboPenev's talk at the int'l symposium "#BiodiversityData in montane & arid Eurasia" in Kazakhstan 🇰🇿
Pensoft’s CEO and founder Prof. Dr. Lyubomir Penev presenting his “Data papers on biodiversity” talk at the “Biodiversity data in montane and arid Eurasia” symposium jointly organized by GBIF and by the Institute of Zoology of Republic of Kazakhstan (November, Kazakhstan).
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📸Today, at the @EASEeditors symposium, our @teodorpensoft gave a sneak peek into the AI-assisted tools at @ARPHAplatform we have been working on (e.g. Word -> JATS XML conversion) and the #ARPHA Writing Tool 2.0 (coming up in early 2025)!🎉
Pensoft’s CTO Teodor Georgiev presents new features and workflows currently in testing at the ARPHA Writing Tool 2.0 at the EASE Autumn Symposium 2024 (online event).Pensoft’s Head of Journal development, Marketing and PR Iva Boyadzhieva talks about Pensoft’s data publishing approach and innovations at the German Ecological Society 53rd Annual Conference (September, Germany).
Pensoft as a science communicator
At our Project team, which is undoubtedly the fastest developing department at Pensoft, science communicators are working closely with technology and publishing teams to help consortia bring their scientific results closer to policy actors, decision-makers and the society at large.
Ultimately, bridging the notorious chasm between researchers and global politics boils down to mutual understanding and dialogue.
Pensoft’s communication team attended COP16 (November 2024, Colombia) along with partners at the consortia of CO-OP4CBD, BioAgora and RESPIN: three Horizon Europe projects, whose communication and dissemination is led by Pensoft.
Throughout 2024, the team, comprising 20 science communicators and project managers, has been working as part of 27 EU-funded project consortia, including nine that have only started this year (check out all partnering projects on the Pensoft website, ordered from most recently started to oldest). Apart from communicating key outcomes and activities during the duration of the projects, at many of the projects, our team has also been actively involved in their grant proposal drafting, coordination, administration, platform development, graphic and web design and others (see all project services offered by Pensoft to consortia).
📸As leaders of the “Stakeholder engagement, comms & dissemination” WP at @BCubedProject, we joined the annual meeting to report on project branding, #scicomm & #DataManagement.
Naturally, we had a seat on the front row during many milestones achieved by our partners at all those 27 ongoing projects, and communicated to the public by our communicators.
Amongst those are the release of the InsectsCount web application developed within the Horizon 2020 project SHOWCASE. Through innovative gamification elements, the app encourages users to share valuable data about flower-visiting insects, which in turn help researchers gain new knowledge about the relationship between observed species and the region’s land use and management practices (learn more about InsectsCount on the SHOWCASE prroject website).
Another fantastic project output was the long-awaited dataset of maps of annual forest disturbances across 38 European countries derived from the Landsat satellite data archive published by the Horizon Europe project ForestPaths in April (find more about the European Forest Disturbance Atlas on the ForestPaths project website).
In a major company highlight, last month, our project team participated in COP29 in Baku, Azerbaijan with a side event dedicated to the role of open science and science communication in climate- and biodiversity-friendly policy.
Pensoft’s participation at COP29 – as well as our perspective on FAIR data and open science – were recently covered in an interview by Exposed by CMD (a US-based news media accredited to cover the event) with our science communicator Alexandra Korcheva and project manager Boris Barov.
You see, A LOT of great things worth celebrating happened during the year for us at Pensoft: all thanks to ceaselessly flourishing collaboration based on transparency, trust and integrity. Huge ‘THANK YOU!’ goes to everyone who has joined us in our endeavours!
Here’s to many more shared achievements coming up in 2025!
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At the 5th ESP Europe conference in Wageningen, Pensoft will lead a training session on effective science communication through open access publishing.
The Ecosystem Services Partnership (ESP) is a global network that connects ecosystem services scientists, practitioners, stakeholders, and policymakers at local, national, regional, and global scales. ESP enhances and encourages a diversity of approaches, while reducing unnecessary duplication of effort in the development of concepts and application of ecosystem services.
Starting in 2008, ESP organises annual international conferences, where experts share research progress and exchange ideas in the field of ecosystem services, strengthening cooperation among scientists and practitioners. Since 2015, global and regional conferences started taking place bi-annually, with the 5th ESP Europe conference taking place this year between 18 and 22 November in Wageningen, The Netherlands, under the theme ‘Ecosystem Services: One Planet, One Health’.
The ESP Europe conference will focus on the question of how the ecosystem services concept can address the challenges involved in delivering the global vision of One Health. It will also highlight the interdependence of health across various domains – human, animal, plant, and ecosystem health, and the health of the global environment.
In addition to the main event, the organisers are providing access to pre-conference trainings on Sunday, 17 November, one day before the official start of the conference. One of these focuses on science communication and its role in enhancing research impact. Titled “Innovative tools for science communication: How to increase your research impact”, this session will be hosted by Pensoft Publishers.
A communication and dissemination leader in a wide range of EU research projects, as well as an independent publishing company, Pensoft will introduce the participants to best practices in science communication, drawing examples from a project portfolio which covers ecosystems and biodiversity, agriculture and forestry, pollinators and more. This training activity will also highlight the integral role of open science in effective dissemination, showcasing the opportunities facilitated by Pensoft’s open-access journals, which promoting transparency, accessibility, and reusability of results. Overall, the session will provide an in-depth look into the interlinkage between effectively communicated research outputs and the benefits of openly published data.
The Pensoft team will share their experiences with projects such as SELINA and SpongeBoost, both of which will also be presented in the scientific sessions and via a shared booth at the event.
Everyone who has already registered for the official programme can still add a training to their application using this link.
At the Pensoft’s stand, delegates learned about the scientific publisher’s versatile open-access journal portfolio, as well as related publishing services and the Horizon project where Pensoft is a partner.
Here’s a fun fact: the University of Bologna is the oldest one still in operation in the world. It is also etched in history for being the first institution to award degrees of higher learning.
This year, the annual event themed “Biodiversity positive by 2030” took place in the stunning Italian city of Bologna famous for its historical and cultural heritage, in a way building a bridge between the past of European civilisation and the future, which is now in our hands.
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At the Pensoft’s stand, delegates learned about the scientific publisher’s versatile open-access journal portfolio of over 30 journals covering the fields of ecology and biodiversity, as well as other related services and products offered by Pensoft, including the end-to-end full-featured scholarly publishing platform ARPHA, which hosts and powers all Pensoft journals, in addition to dozens other academic outlets owned by learned societies, natural history museums and other academic institutions.
In addition to its convenient collaborative online environment, user interface and automated export/import workflows, what ARPHA’s clients enjoy perhaps the most, are the various human-provided services that come with the platform, including graphic and web design, assistance in journal indexing, typesetting, copyediting and science communication.
Visitors at the stand could also be heard chatting with Pensoft’s Head of Journal development, Marketing and PR: Iva Boyadzhieva about the publisher’s innovative solutions for permanent preservation and far-reaching dissemination and communication of academic outputs that do not match the traditional research article format.
For example, the Research Ideas and Outcomes (RIO) journal was launched in 2015 by Pensoft as an open-science journal that would publish ‘unconventional’ research outputs, such as Grant proposals, Policy briefs, Project reports, Data management plans, Research ideas etc. Its project-branded open-science collections are in fact one of the Pensoft’s products that enjoys particular attention to participants in scientific projects funded by the likes of the European Commission’s Horizon programme.
Another innovation by Pensoft that easily becomes a talking point at forums like ECCB, is the ARPHA Conference Abstract (ACA) platform, which is basically a journal for conference abstracts, where abstracts are treated and published much like regular journal articles (a.k.a. ‘mini papers’) to enable permanent preservation, but also accessibility, discoverability and citability. Furthermore, ACA has been designed to act as an abstracts submission portal, where the abstracts undergo review and receive feedback before being published and indexed at dozens of relevant scientific databases.
On Wednesday, delegates also got a chance to hear the talk by renowned vegetation ecologist at the ZHAW Zurich University of Applied Sciences and Editor-in-Chief at the Vegetation Classification and Survey journal: Prof. Dr. Jürgen Dengler. He presented findings and conclusions concerning neophytes in Switzerland, while drawing comparisons with other European countries and regions.
🌱 Presence of #neophytes is not necesarily problematic, and can actually have positive effect, concludes recent research on 🇨🇭Swiss #grasslands diversity.
At this year’s ECCB, Pensoft took a stand as an active Horizon project participant too. At the publisher’s booth, the delegates could explore various project outputs produced within REST-COAST, SpongeBoost and BioAgora. Each of these initiatives has been selected by the European Commission to work on the mitigation of biodiversity decline, while aiming for sustainable ecosystems throughout the Old continent.
In all three projects, Pensoft is a consortium member, who contributes with expertise in science communication, dissemination, stakeholder engagement and technological development.
Having started earlier this year, SpongeBoost is to build upon existing solutions and their large-scale implementation by implementing innovative approaches to improve the functional capacity of sponge landscapes. The project is coordinated by the Helmholtz Centre for Environmental Research (UFZ) and will be developed with the active participation of 10 partnering institutions from seven countries across Europe.
In the meantime, since 2022, the five-year BioAgora project has been working towards setting up the Science Service for Biodiversity platform, which will turn into an efficient forum for dialogue between scientists, policy actors and other knowledge holders. BioAgora is a joint initiative, which brings together 22 partners from 13 European countries led by the Finnish Environment Institute (SYKE).
4/🧵 The @HorizonEU project @BioAgoraEU is to create an efficient platform for dialogue between #scientists, policy actors & other knowledge holders.
Still, REST-COAST, SpongeBoost and BioAgora were not the only Horizon projects involving Pensoft that made an appearance at ECCB this year thanks to the Pensoft team.
On behalf of OBSGESSION – another Horizon-funded project, Nikola Ganchev, Communications officer at Pensoft, presented a poster about the recently started project. Until the end of 2027, the OBSGESSION project, also led by the Finnish Environment Institute (SYKE) and involving a total of 12 partnering organisations, will be tasked with the integration of different biodiversity data sources, including Earth Observation, in-situ research, and ecological models. Eventually, these will all be made into a comprehensive product for biodiversity management in both terrestrial and freshwater ecosystems.
On Tuesday evening, the CO-OP4CBD (abbreviation for Co-operation for the Convention on Biological Diversity) team: another Horizon Europe project, where Pensoft contributes with expertise in science communication and dissemination, held a workshop dedicated to what needs to be done to promote CBD activities in Central and Eastern Europe.
On the next day, scientists from the EuropaBON consortium: another project involving Pensoft that had concluded only about a month ago, held a session to report on the final conclusions from the project concerning the state and progress in biodiversity monitoring.
📌Eastern Europe and countries outside Europe underrepresented in the @EuropaBon_H2020 network, reports Christian Langer at #eccb2024bologna.
Scholarly publisher Pensoft is excited to announce it is now on Chinese social media platform Weibo. The move is aimed at fostering stronger connections with researchers, academics, and enthusiasts in China, which in turn will enhance the dissemination of scientific knowledge and facilitate international collaboration.
With over half a billion active users, Weibo is a powerful social media platform that combines the functionalities of microblogging and social networking. The Pensoft team is looking forward to engaging in real-time conversations with its Chinese audience, sharing insights, and receiving their feedback.
The launch coincides with the Dragon Boat Festival, a significant cultural event in China that commemorates the ancient poet Qu Yuan and symbolizes unity and teamwork.
The move aims to make Pensoft’s publications and updates more accessible to Chinese researchers, allowing them to stay informed about the latest scientific discoveries and advancements. In addition, it offers an excellent opportunity for Pensoft to foster collaborations with Chinese institutions, researchers, and academic societies.
As a pioneer in open-access publishing, Pensoft will also use its Weibo account to promote the benefits of open access, making sure Chinese research reaches a global audience without paywalls.
“China, with its rapidly growing research output and a burgeoning community of scholars, represents a significant segment of the global academic landscape. Recognizing the importance of engaging with this vibrant community, Pensoft’s decision to establish a presence on Weibo underscores its commitment to inclusivity and accessibility in scientific publishing,” says Lyubomir Penev, CEO and founder of Pensoft.
We invite you to join Pensoft’s Weibo account to learn all about our latest scientific discoveries and publishing updates.
Ecosystem services’ (ES) integration into global policies is widely recognized as a hope for environmental sustainability, as they provide a robust framework for representing natural values. The role of healthy ecosystems in combating climate change-related risks and ensuring the sustainability of ecosystem services that are critical for human-natural life is well understood, and in this context, the protection and sustainability of Integrated ES areas, which represent the highest ecological functional areas in this sense, need to be highlighted. Integrated ES can be a potent tool to inform and guide spatial decision-making. However, presently, there is a need to improve the content of related conventional tools on how to introduce and involve their roles in decision-making processes.
A map of Istanbul showing the integrated ecosystem services potential of the current situation.
Our paper, published in the journal One Ecosystem, investigates the incorporation of this problem, underlines ES significance as the Integrated ES, and transfers this information into spatial decision-making. The content of the paper discusses the potential contributions and limitations of the integration. It provides solid suggestions on how Integrated ES can be operationalized in Istanbul’s high-level plans.
Research article:
Türkay Z, Tezer A (2024) Contribution of integrated ecosystem services to urban planning tools: Can it be more functional for the sustainability of ecosystems? One Ecosystem 9: e121553. https://doi.org/10.3897/oneeco.9.e121553
Within theBiodiversity Community Integrated Knowledge Library (BiCIKL) project, 14 European institutions from ten countries, spent the last three years elaborating on services and high-tech digital tools, in order to improve the findability, accessibility, interoperability and reusability (FAIR-ness) of various types of data about the world’s biodiversity. These types of data include peer-reviewed scientific literature, occurrence records, natural history collections, DNA data and more.
By ensuring all those data are readily available and efficiently interlinked to each other, the project consortium’s intention is to provide better tools to the scientific community, so that it can more rapidly and effectively study, assess, monitor and preserve Earth’s biological diversity in line with the objectives of the likes of the EU Biodiversity Strategy for 2030 and the European Green Deal. Their targets require openly available, precise and harmonised data to underpin the design of effective measures for restoration and conservation, reminds the BiCIKL consortium.
Since 2021, the project partners at BiCIKL have been working together to elaborate existing workflows and links, as well as create brand new ones, so that their data resources, platforms and tools can seamlessly communicate with each other, thereby taking the burden off the shoulders of scientists and letting them focus on their actual mission: paving the way to healthy and sustainable ecosystems across Europe and beyond.
Now that the three-year project is officially over, the wider scientific community is yet to reap the fruits of the consortium’s efforts. In fact, the end of the BiCIKL project marks the actual beginning of a European- and global-wide revolution in the way biodiversity scientists access, use and produce data. It is time for the research community, as well as all actors involved in the study of biodiversity and the implementation of regulations necessary to protect and preserve it, to embrace the lessons learned, adopt the good practices identified and build on the knowledge in existence.
This is why amongst the BiCIKL’s major final research outputs, there are two Policy Briefs meant to summarise and highlight important recommendations addressed to key policy makers, research institutions and funders of research. After all, it is the regulatory bodies that are best equipped to share and implement best practices and guidelines.
Most recently, the BiCIKL consortium published two particularly important policy briefs, both addressed to the likes of the European Commission’s Directorate-General for Environment; the European Environment Agency; the Joint Research Centre; as well as science and policy interface platforms, such as the EU Biodiversity Platform; and also organisations and programmes, e.g. Biodiversa+ and EuropaBON, which are engaged in biodiversity monitoring, protection and restoration. The policy briefs are also to be of particular use to national research funds in the European Union.
One of the newly published policy briefs, titled “Uniting FAIR data through interlinked, machine-actionable infrastructures”, highlights the potential benefits derived from enhanced connectivity and interoperability among various types of biodiversity data. The publication includes a list of recommendations addressed to policy-makers, as well as nine key action points. Understandably, amongst the main themes are those of wider international cooperation; inclusivity and collaboration at scale; standardisation and bringing science and policy closer to industry. Another major outcome of the BiCIKL project: the Biodiversity Knowledge Hub portal is noted as central to many of these objectives and tasks in its role of a knowledge broker that will continue to be maintained and updated with additional FAIR data-compliant services as a living legacy of the collaborative efforts at BiCIKL.
The second policy brief, titled “Liberate the power of biodiversity literature as FAIR digital objects”, shares key actions that can liberate data published in non-machine actionable formats and non-interoperable platforms, so that those data can also be efficiently accessed and used; as well as ways to publish future data according to the best FAIR and linked data practices. The recommendations highlighted in the policy brief intend to support decision-making in Europe; expedite research by making biodiversity data immediately and globally accessible; provide curated data ready to use by AI applications; and bridge gaps in the life cycle of research data through digital-born data. Several new and innovative workflows, linkages and integrative mechanisms and services developed within BiCIKL are mentioned as key advancements created to access and disseminate data available from scientific literature.
While all policy briefs and factsheets – both primarily targeted at non-expert decision-makers who play a central role in biodiversity research and conservation efforts – are openly and freely available on the project’s website, the most important contributions were published as permanent scientific records in a BiCIKL-branded dedicated collection in the peer-reviewed open-science journal Research Ideas and Outcomes (RIO). There, the policy briefs are provided as both a ready-to-print document (available as supplementary material) and an extensive academic publication.
Currently, the collection: “Towards interlinked FAIR biodiversity knowledge: The BiCIKL perspective” in the RIO journal contains 60 publications, including policy briefs, project reports, methods papers, conference abstracts, demonstrating and highlighting key milestones and project outcomes from along the BiCIKL’s journey in the last three years. The collection also features over 15 scientific publications authored by people not necessarily involved in BiCIKL, but whose research uses linked open data and tools created in BiCIKL. Their publications were published in a dedicated article collection in the Biodiversity Data Journal.
