Tag: taxonomy

Artificial neural networks could power up curation of natural history collections

Deep learning techniques manage to differentiate between similar plant families with up to 99 percent accuracy, Smithsonian researchers reveal

Millions, if not billions, of specimens reside in the world’s natural history collections, but most of these have not been carefully studied, or even looked at, in decades. While containing critical data for many scientific endeavors, most objects are quietly sitting in their own little cabinets of curiosity.

Thus, mass digitization of natural history collections has become a major goal at museums around the world. Having brought together numerous biologists, curators, volunteers and citizens scientists, such initiatives have already generated large datasets from these collections and provided unprecedented insight.

Now, a study, recently published in the open access Biodiversity Data Journal, suggests that the latest advances in both digitization and machine learning might together be able to assist museum curators in their efforts to care for and learn from this incredible global resource.

A team of researchers from the Smithsonian Department of Botany, Data Science Lab, and Digitization Program Office recently collaborated with NVIDIA to carry out a pilot project using deep learning approaches to dig into digitized herbarium specimens.

*Smithsonian researchers classifying digitized herbarium sheets.*

Their study is among the first to describe the use of deep learning methods to enhance our understanding of digitized collection samples. It is also the first to demonstrate that a deep convolutional neural network–a computing system modelled after the neuron activity in animal brains that can basically learn on its own–can effectively differentiate between similar plants with an amazing accuracy of nearly 100%.

In the paper, the scientists describe two different neural networks that they trained to perform tasks on the digitized portion (currently 1.2 million specimens) of the United States National Herbarium.

The team first trained a net to automatically recognize herbarium sheets that had been stained with mercury crystals, since mercury was commonly used by some early collectors to protect the plant collections from insect damage. The second net was trained to discriminate between two families of plants that share a strikingly similar superficial appearance.

*Sample herbarium specimen image of stained clubmoss.*

The trained neural nets performed with 90% and 96% accuracy respectively (or 94% and 99% if the most challenging specimens were discarded), confirming that deep learning is a useful and important technology for the future analysis of digitized museum collections.

“The results can be leveraged both to improve curation and unlock new avenues of research,” conclude the scientists.

“This research paper is a wonderful proof of concept. We now know that we can apply machine learning to digitized natural history specimens to solve curatorial and identification problems. The future will be using these tools combined with large shared data sets to test fundamental hypotheses about the evolution and distribution of plants and animals,” says Dr. Laurence J. Dorr, Chair of the Smithsonian Department of Botany.

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Original source:

Schuettpelz E, Frandsen P, Dikow R, Brown A, Orli S, Peters M, Metallo A, Funk V, Dorr L (2017) Applications of deep convolutional neural networks to digitized natural history collections. Biodiversity Data Journal 5: e21139. https://doi.org/10.3897/BDJ.5.e21139

New open-access journal Metabarcoding & Metagenomics joins the lines of publisher Pensoft

The new innovative academic journal makes use of the one-of-a-kind publishing platform ARPHA and its collaborative writing tool via the ARPHA-XML workflow

A new innovative open-access academic journal Metabarcoding and Metagenomics (MBMG) is launched to welcome novel papers from both basic and applied aspects.

Focusing on genetic approaches to study biodiversity across all ecosystems, MBMG covers a considerably large scope of research including environmental, microbial and applied metabarcoding and metagenomics (especially DNA-based bioassessment and -monitoring, quarantine, nature conservation, species invasions, eDNA surveillance), as well as associated topics, such as molecular ecology, DNA-based species delimitation and identification, and other emerging related fields. Submissions of bioinformatic approaches to MBMG (algorithms, software) are also encouraged.

Featuring novel article formats and data publishing workflows, MBMG is to reflect the rapid growth in the use of metabarcoding and metagenomics in life and environmental sciences.

Issued via ARPHA – the first ever publishing platform to support manuscripts all the way from authoring to peer review to publication and dissemination, designed by the academic publisher and technology provider Pensoft, the new journal is to host a wide range of outcomes from across the research cycle, including data, models, methods, workflows, software, perspectives, opinions, implementation strategies, as well as conventional research articles.

While the above-mentioned publication types are already available in other journals published on the ARPHA platform, such as Research Ideas and Outcomes (RIO), Biodiversity Data Journal and One Ecosystem, MBMG provides five extra domain-specific article types, namely: Emerging Technique, Applied Study, DNA Barcode Release, Primer Validation and Probe Validation.

The journal’s articles are to be available in three formats (PDF, XML, HTML) and full of semantic enhancements for better human- and machine-readability and discoverability. The XML-based workflow also ensures that content and data are available for extraction, indexing and re-use immediately after publication.

With Pensoft standing for transparent, reproducible and open science, the authors at MBMG are strongly encouraged to make all data publicly available either within the publication itself, or to link to external repositories. In their turn, the peer reviewers are also suggested to provide public access to their reviews and identities.

In time for the launch, MBMG has already gathered a team of experienced and renowned scientists from across the globe together on its editorial and advisory board.

“I am pleased to introduce the Metabarcoding and Metagenomics journal to the family of Pensoft,” says Prof. Lyubomir Penev, Founder and Managing Director at Pensoft. “With its exhaustive scope and advanced services and concept, I believe it fills fantastically a niche in our strong portfolio of mostly biodiversity- and ecology-themed journals.”

“Metabarcoding and metagenomics approaches are rapidly progressing and revolutionise research and its application alike,” Chief Editor Prof. Florian Leese states. “With the MBMG journal we provide an ideal platform to respond to this rapidly growing field, nucleate the emerging knowledge and stimulate further development.”

The first batch of research papers published in MBMG are now available on their new website.

“MBMG not only complements the range of journals in the field of molecular environmental life sciences, but also stands out as a novel outlet providing several unique features designed to help researchers to prepare for, and professionally deal with, the massive “deluge” of data,” reads the Editorial.

To celebrate the launch, MBMG starts with a tempting offer to potential authors: publishing will be completely free of charge during the beginning stages of the journal.

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Heat-loving Australian ants believe in diversity, hint 74 species new to science

The ‘furnace ants’ or ‘honeypot ants’ present a very large genus of ants, Melophorus, confined to Australia. Long believed to be megadiverse, some scientists have even suggested that the group may contain ‘well over 1000 species’. However, to this point, only 32 species and subspecies had been described.

Scientists Dr Brian Heterick of Curtin University, Dr Mark Castalanelli of Ecodiagnostics Pty Ltd and Dr Steve Shattuck of the Australian National University, funded by an internationally competitive Australian Biological Resources (ABRS) grant, set out to find the true facts.

As a result, they discovered as many as 74 new species belonging to Melophorus. In their study, published in the open access journal ZooKeys, they also provide a taxonomic key to the workers of a total of 93 species in the genus.

Among the studied ants, there are quite bizarre ones, including a species (Melophorus hirsutus) whose eyes are strangely protruding out of his head to a varying degree. In the extreme cases, the eyes are so pointy that could be likened to ice-cream cones. Named many years ago, this ant appears to be older than the rest of the examined living species. Furthermore, unlike most of them, it does not seem adapted to heat. It is confined to the wet eastern coast of Australia.

Dr Heterick spent two weeks collecting specimens in the often rugged and forbidding terrain of Western Australia, while the team also asked a number of major museum collections to loan them specimens.

The newly collected ants were placed in alcohol and subjected to genetic tests using one mitochondrial and four nuclear genes. The findings were then compared with those from physical examinations to prepare the taxonomic key – a set of distinctive features per species that can be used to differentiate within the group.

Given the generally complex nature of these ants, the authors expect for the genus to further expand in future. They speculate that even though the numbers may increase to around 100 species, not the ‘well over 1000’ previously predicted, they still illustrate an incredible diversity.

The authors estimate that Melophorus arose around 35 million years ago. The closest relatives of the genus are also confined to the Australasian region with the exception of a single genus living in South America.

Furthermore, the genus is also quite astonishing thanks to another trait shared among the species.

“By the way, this group of ants has a thing or two to tell those of us who get lost easily!” comments lead author Dr Brian Heterick.

“They can find their way home in a featureless landscape by means of an internal compass influenced by information gathered on earlier journeys. We are not the first species to use a computing system!”

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Original source:

Heterick B, Castalanelli M, Shattuck S (2017) Revision of the ant genus Melophorus (Hymenoptera, Formicidae). ZooKeys 700: 1-420. https://doi.org/10.3897/zookeys.700.11784

Six new sponge species and new symbiotic associations from the Indonesian coral triangle

Comprising more than 17,000 islands, the Indonesian archipelago is one of the world’s most biodiverse places on Earth.

Sponges, aquatic organisms whose bodies consist of numerous pores to allow the ingress of water, are key components of this richness and play a fundamental role in the survival of coral reef habitats. Furthermore, they are also known for their medicinal benefits.

Unfortunately, due to the paucity of taxonomic expertise, the sponges from the Indonesian reefs are often ignored in monitoring surveys and conservation programmes, while their diversity is largely underestimated.

Researchers from the Italian Università Politecnica delle Marche and Università degli Studi di Genova, PharmaMar, Spain, and University of Sam Ratulangi, Indonesia, describe six new species in their paper in the open access journal, ZooKeys.

Inspired by their extraordinary biodiversity, the researchers teamed up with the pharmaceutical company PharmaMar to conduct several expeditions in the waters of North Sulawesi Island.

The authors reported a total of 94 demosponge species belonging to 33 families living in the North Sulawesi Island. Amongst them, there are six species new to science and two previously unknown symbiotic relationships.

Seven of the recorded species were collected for the very first time since their original description.

However, these findings are still scarce, given the abundance of the sponges in similar localities in the Indonesian archipelago.

In conclusion, the authors note that the marine diversity in Indonesia is still far from being well known.

“Thanks to this impressive diversity, these areas are important spots for diving tourism and require the urgent development of sustainable tourism practices,” they say.

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Original source:

Calcinai B, Bastari A, Bavestrello G, Bertolino M, Horcajadas SB, Pansini M, Makapedua DM, Cerrano C (2017) Demosponge diversity from North Sulawesi, with the description of six new species. ZooKeys 680: 105-150. https://doi.org/10.3897/zookeys.680.12135

Threatened Alabama snail renamed after a case of mistaken identity

Contrary to what scientists have known for over 100 years, the Painted Rocksnail turns out to have never existed outside the Coosa River system

Alabama has some of the highest diversity of freshwater snails in the world, but many snails are at high risk of extinction.

An essential part of determining extinction risk is knowing the range of a given species and determining how much its range has contracted owing to anthropogenic impacts, but mistaken identity or misidentification can complicate conservation efforts.

The Painted Rocksnail, a small snail from the Coosa River system, has been mistakenly identified as other species for over 100 years.

In a study published in the open access journal ZooKeys, scientists Dr. Nathan Whelan, U.S. Fish and Wildlife Service, Dr. Paul Johnson and Jeff Garner, Alabama Department of Conservation and Natural Resources, and Dr. Ellen Strong, Smithsonian Institution National Museum of Natural History, tackled the identity of the Painted Rocksnail, a small federally threatened species native to the Mobile River basin in Alabama.

Freshwater snails are notoriously difficult to identify, as the shells of many species can look very similar. Keeping this in mind, the researchers began to notice that many shells identified as the Painted Rocksnail in museums around the world were misidentified specimens of the Spotted Rocksnail, another snail species found in Alabama.

After examining shells at the Academy of Natural Sciences of Philadelphia, Museum of Comparative Zoology at Harvard, National Museum of Natural History, North Carolina Museum of Natural Sciences, Florida Museum of Natural History, and Natural History Museum in London, in addition to hundreds of hours of their own sampling throughout the Mobile River basin, the authors determined that all previous reports of the Painted Rocksnail from outside the Coosa River system were mistakes.

Despite the Painted Rocksnail dwelling in well-studied rivers near large population centers, mistaken identity of the species has persisted almost since the species was described back in 1861 by Isaac Lea.

Only after careful examination of shells collected in the last 150 years and analyses of live animals were the researchers able to confidently determine that the Painted Rocksnail never occurred outside the Coosa River system.

The study has implications for the conservation of the Painted Rocksnail, as the species was historically more restricted than previously thought. Recent surveys by the authors only found the species in small stretches of the Coosa River, Choccolocco Creek, Buxahatchee Creek, and Ohatchee Creek.

In conclusion, the authors note the importance of natural history museums and the importance of studying snails in the southeastern United States.

“Without the shells stored in natural history museums we would have never been able to determine that the supposed historical range of the Painted Rocksnail was incorrect, which could have resulted in less effective conservation efforts for an animal that is very important to the health of rivers in Alabama,” they say.

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Original Source:

Whelan NV, Johnson PD, Garner JT, Strong EE (2017) On the identity of Leptoxis taeniata – a misapplied name for the threatened Painted Rocksnail (Cerithioidea, Pleuroceridae). ZooKeys697: 21-36. https://doi.org/10.3897/zookeys.697.14060

An overlooked and rare new gall-inducing micromoth from Brazil

A new species and genus (Cecidonius pampeanus) of primitive monotrysian micromoth from the Brazilian Pampa biome has been recently discovered to induce scarcely noticeable galls under the swollen stems of the Uruguayan pepper tree.

Gall-inducing moths lay their eggs in the tree bark, where the larvae form the characteristic roundish swellings as they grow larger. In their turn, these galls attract various parasitoids and inquiline wasps – wasps that have lost the ability to form galls for their own eggs – and so they take advantage of the galls of other species, while under development. The inquilines modify the galls into larger ones which subsequently last longer and attract even more attention. As a result, even though abundant as young, the new moth’s larvae rarely survive and their density in the field later in life is low.

While free-living gall moths are generally rare, the studied genus pupates on the ground, resulting in its being overlooked for over a century. Furthermore, the galls fall to the ground where the last instar larvae undergo a period of suspended development for months. They stay motionless within their gall until pupation and emerge as adults in the next growing season.

After all this time, this species has finally been recognised in the open access journal ZooKeys by an international research team, led by Dr. Gilson Moreira, Universidade Federal do Rio Grande do Sul, Brazil. In their paper, the scientists describe the gall, immature stages and adults of the moth. They also provide information on its natural history in conjunction with one of the associated parasitoid and inquiline wasps.

“It took several years to obtain a small number of C. pampeanus pupae and adults to use for the description,” say the authors.

“The existence of these galls has been known for more than a century. However, biologists believed they are induced by the inquiline wasps,” they explain. “Consequently, it turned out that the wasps do not induce galls, but rather modify them early in development into large and colourful, visually appealing galls.”

The study also provides strong evidence that the species is under threat of extinction and the scientists suggest that protective measures need to be taken to conserve it.

In fact, they found strikingly low levels of gene flow amongst populations of C. pampeanus. In their paper, the team also emphasises that, in case of extinction of the primary gall inducer, a whole insect community associated with their galls will follow. This could happen even before science becomes familiar with all of these species.

Open savannahs of southern Brazil, where populations of the new moth’s host plant (the Uruguayan pepper tree) are found, have been suffering from anthropic impact for decades, mostly caused by agriculture and cattle ranching.

Curiously, the present study is the first in Brazil to suggest that a micromoth and its associated fauna should be subjected to conservation measures.

Extant populations of the new species are distant and isolated from each other, being restricted to a small geographic area in the northeast Southern Brazilian “Campos” (= Pampean savannah), a neglected biome from a nature preservation perspective. Most of the moths have retreated to higher elevations, such as hilltops and hill slopes interspersed with small bushes, where they get shelter from the anthropic influence.

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Original source:

Moreira GRP, Eltz RP, Pase RB, Silva GT, Bordignon SAL, Mey W, Gonçalves GL (2017) Cecidonius pampeanus, gen. et sp. n.: an overlooked and rare, new gall-inducing micromoth associated with Schinus in southern Brazil (Lepidoptera, Cecidosidae). ZooKeys 695: 37-74. https://doi.org/10.3897/zookeys.695.13320

The Western Ghats of India revealed two new primitive species of earthworm

The Western Ghats mountains lie at the southwestern continental margin of Peninsular India and extend all the way from Gujarat to Kerala. The massif has earned its place amongst the eight ‘hottest’ biodiversity hotspots in the world.

There is a great variety of vegetation types which, coupled with the high rainfall and the moderate yearly temperature in the Western Ghats, provide many different habitats. Therefore, the mountains an area rich in earthworm, as well as amphibian and reptile diversity.

The two new species, named Drawida polydiverticulata and Drawida thomasi, have been discovered in the Western Ghats mountain ranges in Kerala by scientists Dr. S. Prasanth Narayanan, Mr. S. Sathrumithra, Dr. G. Christopher, all affiliated with Mahatma Gandhi University and Dr. J.M. Julka of the Shoolini University, India. They belong to the primitive family Moniligastridae. The species are described in the open access journal ZooKeys.

The new earthworms are distinguished by a set of characters. For one of them – Drawida polydiverticulata – there were peculiar features which determined its species name (polydiverticulata). It turned out that its multiple lobes, also called diverticulums, an organ located in the front of its body, are unique amongst the members of the genus. This species was found to be widespread in the protected shola grasslands of the Munnar region, including Eravikulam National Park, Pampadun Shola National Park and Chinnar Wildlife Sanctuary.

The second new earthworm, Drawida thomasi, was collected at the Kozhippara Waterfalls near Kakkadampoyil, at the border between Malappuram and Kozhikode. The species name (thomasi) is a tribute to Prof. (Dr.) A.P. Thomas, the Director of the Advanced Centre of Environmental Studies and Sustainable Development (ACESSD), Mahatma Gandhi University, “who initiated the taxonomical studies on the earthworms in Kerala after being at a standstill for almost a century.”

In addition to the new species, the scientists also report the occurrence of five species of the same genus that have not previously been recorded from the state.

To date, there are 73 species of the genus Drawida confirmed to be living in the Indian subcontinent. However, the greatest concentration (43 species) is found in the Western Ghats. The genus has an important centre of speciation in the southernmost state of Kerala.

Prior to this study, there had been sixteen Drawida species known from the state with ten of them being unique. The present discovery of two new species and five new local records further contributes to the vast species richness of the genus in the state.

At present, there are about 200 species known in the genus Drawida. Their habitats are spread across India throughout the Indochina region to southeastern Asia and up to the north in Japan.

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Original source:

Narayanan SP, Sathrumithra S, Christopher G, Julka JM (2017) New species and new records of earthworms of the genus Drawida from Kerala part of the Western Ghats biodiversity hotspot, India (Oligochaeta, Moniligastridae). ZooKeys 691: 1-18. https://doi.org/10.3897/zookeys.691.13174

New proposal for a subspecies definition triggered by a new longhorn beetle subspecies

The discovery of a new subspecies of longhorn beetle from Scandinavia triggered a discussion on the vague organism classification rank ‘subspecies’.

As a result, a newly proposed definition of subspecies has been published along with the description of the taxon in the open access journal ZooKeys by the research team of Henrik Wallin and Johannes Bergsten from the Swedish Museum of Natural History and Torstein Kvamme from the Norwegian Institute of Bioeconomy Research.

The northernmost populations of Saperda populnea display a number of divergent traits, including a shorter male antenna and reduced pubescens. In contrast with their most closely related subspecies (Saperda populnea populnea), whose favourite host plant, amongst others, is the European aspen, the new subspecies (Saperda populnea lapponica) specialised exclusively on downy willow (Salix lapponum).

According to the once no less disputed definition of species, regardless of their unique traits, populations cannot be considered as separate species until they are no longer able to produce fertile offspring according to the Biological Species concept, this being one of a number of proposed species concepts. A consensus is emerging around the unified species concept defining species as separately evolving (meta) population lineages.

However, differentiating between subspecies nowadays is a significantly tougher task, since there is no stable definition of the rank yet. Through the years, there have been various explanations of what a subspecies is and what criteria it needs to meet in order to be classified as one.

Compared to previous definitions, the researchers decode it quite simply. To them, the only necessary attributes a population needs to possess before being deemed a subspecies are that they are a potentially incipient new species; diagnosed by at least one heritable trait; and either partially or completely isolated geographically.

Furthermore, they refute a number of factors, including reciprocal monophyly in neutral markers, the “75% rule”, reproductive compatibility and the degree of gene flow.

The concept of subspecies has been so problematic that there have been even those scientists who have argued that taxonomy needs to discard it altogether.

However, the authors note that it is already formally recognised by the International Commission on Zoological Nomenclature (ICZN 1999), “albeit without giving any advice or criteria for its recognition.”

“The concept is more than a mere academic debate as subspecies are recognized in various Red Lists and conservation programs, and hence the recognition as a subspecies or not can have legal and monetary consequences.”

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Original source:

Wallin H, Kvamme T, Bergsten J (2017) To be or not to be a subspecies: description of Saperda populnea lapponica ssp. n. (Coleoptera, Cerambycidae) developing in downy willow (Salix lapponum L.). ZooKeys 691: 101-148. https://doi.org/10.3897/zookeys.691.12880

The ‘Star dust’ wasp is a new extinct species named after David Bowie’s alter ego

During her study on fossil insects of the order Hymenoptera at China’s Capitol Normal University, student Longfeng Li visited the Smithsonian National Museum of Natural History, Washington, carrying two unidentified wasp specimens that were exceptionally well-preserved in Burmese amber. This type of fossilized tree resin is known for the quality of the fossil specimens which can be preserved inside it. Being 100 million years old, they provide an incredible view into the past.

The subsequent analysis of the specimens revealed that both represent species new to science. Furthermore, one of the wasps showed such amazing similarities to a modern group of wasps that it was placed in a currently existing genus, Archaeoteleiawhich has long been considered as an ancient lineage. The species are described in a study published in the open access Journal of Hymenoptera Research.

However, Archaeoteleia has changed since the times when the ancient wasp got stuck on fresh tree resin. The authors note that “a novice might not recognize the characters that unite the fossil with extant species”. For instance, the modern wasp species of the genus show visibly longer antennal segments and a different number of teeth on the mandible when compared to the fossil. In turn, the description of the new extinct species enhances the knowledge about living species by highlighting anatomical structures shared by all species within the genus.

This fossil wasp with living relatives received quite a curious name, Archaeoteleia astropulvis. The species name, astropulvis, translates from Latin to ‘star dust’. The discoverers chose the name to refer to both “the ancient source of the atoms that form our planet and its inhabitants”, as well as to commemorate the late David Bowie’s alter ego – Ziggy Stardust.

Unlike the Star dust wasp, the second new species belongs to a genus (Proteroscelio) known exclusively from Cretaceous fossils. Likewise, it is a tiny insect, measuring less than 2mm in length. It also plays an important role in taxonomy by expanding the anatomical diversity known from this extinct genus.

The authors conclude that their discovery, especially the Star dust wasp and its placement in an extant genus, where it is the only fossil species, “exemplifies the importance of understanding the extant fauna of a taxon to interpret fossils”.

“Such union of fossil and extant morphologies is especially illuminating and requires examination of both kinds of specimens,” they add.

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Original source:

Talamas EJ, Johnson NF, Buffington ML, Dong R (2016) Archaeoteleia Masner in the Cretaceous and a new species of Proteroscelio Brues (Hymenoptera, Platygastroidea). In: Talamas EJ, Buffington ML (Eds) Advances in the Systematics of Platygastroidea. Journal of Hymenoptera Research 56: 241-261. https://doi.org/10.3897/jhr.56.10388

Three new mini thorn snails described from Georgia (USA), Belize and Panama

Although computer tomography (CT) is widely used in medicine, its application in micro snail identification is still at the pioneering stage.

However, Dr Adrienne Jochum from the Naturhistorisches Museum der Burgergemeinde Bern (NMBE), Switzerland and her interdisciplinary team of German and Swiss scientists (Dr. Alexander M. Weigand, University of Duisburg-Essen, Estee Bochud and Thomas Inäbnit, NMBE and the University of Bern, Dorian D. Dörge, Goethe University, Frankfurt, Dr. Bernhard Ruthensteiner, Zoologische Staatssammlung Muenchen, Dr. Adrien Favre, Leipzig University, Gunhild Martels and Dr. Marian Kampschulte, Justus-Liebig University Giessen) have recently applied it in their research, now published in the journal ZooKeys.

As a result of their revolutionary approach, the scientists report three new thorn snail species – tiny, colourless and highly fragile creatures that measure less than 2 mm and belong to the genus Carychium.

Much like X-rays showing the degree of damage in broken bones, CT scans provide access to snail shells. Differences, such as the degree of sinuosity of the potato chip-like wedge (lamella), elegantly gliding along the spindle-like columella, become visible. These structures provide stability and surface area to exert muscular traction while manoeuvring the unwieldy shell into tight cavities. The alignment and degree of undulation of the lamella on the columella is also used by malacologists (mollusc specialists) to identify different thorn snail species.

Conventionally, examination of this signatory character requires cutting a hole in the shell with a fine needle under the microscope. This tedious method requires a much patience and dexterity and, all too often, the shell cracks open or disintegrates into dust under pressure. By exposing the delicate lamella to non-manipulative CT scans, Dr. Jochum and her team have found the best method to differentiate not only thorn snails but also many other micro creatures.

Together with G. Martels and Dr. M. Kampschulte, Dr. Jochum described new micro snails for the first time using CT in East Asian hypselostomatid snails in 2014. The first subterranean Asian relative of the thorn snails (Koreozospeum nodongense), was also described by Dr. Jochum thanks to CT scans in 2015.

The scientists studied and compared thorn snails collected from Mexico, Florida (USA) and Costa Rica.

Curiously, the new species Carychium hardiei was discovered by accident by Dr. Jochum en route to the Atlanta Airport during a rest stop in Georgia (USA). The snail is named after the American naturalist and field biologist Frank Hardie. Another species, Carychium belizeense, was found in the Bladen Nature Reserve in Belize and is named after its country of origin. The third, Carychium zarzaae from Panama, is named after Eugenia Zarza, collector of material for this study, including this species.

In total, there are fourteen species of thorn snails known in North and Central America. Their distribution ranges from as far north as northern Ontario, Canada through North America (including Bermuda and Jamaica) and south through Central America to Costa Rica. Thorn snails also live as far north as northern Sweden and as far south as sub-equatorial Java. Worldwide, this genus spans the Nearctic, Palearctic and Indomalayan biogeographic realms.

Thorn snails live in tropical and temperate forests, meadows and riparian zones, where they comprise the decomposer community in leaf litter of ecologically stable environments.

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Original Source:

Jochum A, Weigand AM, Bochud E, Inäbnit T, Dörge DD, Ruthensteiner B, Favre A, Martels G, Kampschulte M (2017) Three new species of Carychium O.F. Müller, 1773 from the Southeastern USA, Belize and Panama are described using computer tomography (CT) (Eupulmonata, Ellobioidea, Carychiidae). ZooKeys 675: 97-127. https://doi.org/10.3897/zookeys.675.12453