Right under our noses: A novel lichen-patterned spider found on oaks in central Spain

It happened again, a previously unknown spider species, whose home is a strongly humanised European country, appears to have been quietly and patiently waiting to get noticed until very recently.

Living on the trunks of oaks in Spain, the new species would have probably been spotted decades ago, had it not been for its sophisticated camouflage, which allows the small arachnid to perfectly blend with the lichens naturally growing on the tree.

Going by the name Araneus bonali, the new species was discovered on isolated trees at the borders of cereal fields by the scientists Eduardo Morano, University of Castilla-La Mancha, and Dr Raul Bonal, University of Extremadura. Their study is published in the open access journal ZooKeys.

Curiously enough, this is the same habitat, where the team found another new spider in 2016.

“How many new species remain unknown in these isolated oaks that once formed vast forests now becomes one even more intriguing question,” say the researchers.

“Anyone going for a walk around any village or park in central Spain would have been close to the new species. However, noticing it requires not only curiosity, but also a good sight, as its lichen-like colours make up an excellent mimicry.”

Lichens growing on an oak trunk at the study site in central Spain.

The similarity between the adults and the lichens that cover the oak trunks they inhabit is remarkable. Meanwhile, the greenish juveniles live amongst the green new shoots in the oak canopy until they reach maturity.

Whether the spider uses its mimicry to avoid predators or rather surprise its prey remains open for further investigation.

The description of this new species that belongs to the popular group of orb-weavers once again stresses the need of working harder on completing the list of spiders living in the Old World, such as the countries in the Mediterranean basin – a region that certainly keeps more taxonomic surprises up his sleeve.

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Original source:

Morano E, Bonal R (2018) Araneus bonali sp. n., a novel lichen-patterned species found on oak trunks (Araneae, Araneidae). ZooKeys 779: 119-145. https://doi.org/10.3897/zookeys.779.26944

Beetle named after actress & biologist Isabella Rossellini for her series about animals

A new species of beetle with remarkably long genitalia that hint at a curious evolutionary “sexual arms race” has been described from Malaysian Borneo.

The new insect was named after actress and biologist Isabella Rossellini in honour of her stage shows and Webby Award-winning series of films about animal reproduction, featured on SundanceTV.

The species is described by scientists Menno Schilthuizen and Iva Njunjic of Naturalis Biodiversity Center and Universiti Malaysia Sabah, and Michel Perreau, Sorbonne Université, Paris. Their paper is published in the open access journal ZooKeys.

The new species, Ptomaphaginus isabellarossellini, finds a place among the 30 known species of round fungus beetles (subfamily Cholevinae) recorded by the authors from the island of Borneo. Of these, there are a total of 14 which had remained unknown to science until now.

The reason why the scientists named this particular species after the famous actress is its genitalia. The beetle’s penis carries a long, whip-like thread, called flagellum, whereas the female has a similarly long tube leading up to a sperm storage organ.

Lead author Menno Schilthuizen, who himself has previously released a simultaneously educative and entertaining book about the evolution of genitals, says that such exaggerated male and female genitalia often betray an “evolutionary sexual arms race”.

On the male side, natural selection favours longer genitalia because of the ability to directly reach the female’s sperm storage organ. However, female beetles would rather retain their right to favour the DNA of a certain mate over the rest. The upshot is that, over long periods of evolution, penises get longer and vaginas get deeper. Similar evolutionary genital exaggeration is also known in rove beetles and ducks.

“This is better than winning the Oscar,” says honoured Isabella Rossellini.

The Italian-born actress, filmmaker, author, philanthropist, and model has even featured the new beetle in her new Link Link Circus stage shows. Dealing with animal behaviour, the series will be touring theaters in Europe this fall.

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Original source:

Schilthuizen M, Perreau M, Njunjic I (2018) A review of the Cholevinae from the island of Borneo (Coleoptera, Leiodidae). ZooKeys 777: 57-108. https://doi.org/10.3897/zookeys.777.23212

How many sharks, chimaeras, skates, and rays inhabit Mexico?

Worldwide, Mexico is well-known for a lot of things: its cuisine, tequila, mariachis, pyramids, and beaches, as well as being the country with the most Spanish-speaking residents (more than 120 million people).

In contrast, however, little is known for the country’s chondrichthyan fauna: a class of fishes containing the sharks, chimaeras, rays, and skates.

To fill the gap in the knowledge of the Mexican marine fauna, scientists from the Instituto Politécnico Nacional – Centro Interdisciplinario de Ciencias Marinas  (IPN-CICIMAR) conducted a multidisciplinary study on the extant species of the country’s Economic Exclusive Zone (EEZ) and, as a result, reported a total of 217 extant chondrichthyan species. Their findings are published in the open access journal ZooKeys.

In their updated taxonomic list, the team of Dr. José De La Cruz-Agüero, Dr. Jorge Guillermo Chollet-Villalpando, and Venezuelan graduate students Lorem González-González and Nicolás R. Ehemann report eight chimaeras, 111 sharks and 98 ray and skate species. These numbers equate to 18% of the world’s chondrichthyans.

Split between the Mexican coasts there are 92 species recorded from the Mexican Pacific and the Gulf of California, whereas 94 fishes are identified for the Gulf of Mexico and the Caribbean Sea. Additionally, 31 species are known from both coasts.

“The species richness will undoubtedly continue to increase, due to the current investigations in progress, as well as the exploration of deep-water fishing areas in the EEZ,” comment the scientists.

Considered to be primitive fishes, sharks, skates, chimaeras, and rays are believed to have been inhabiting the planet for the last 420-450 million years. To put it in perspective, the earliest evidence of our species – Homo sapiens – is pretty ‘young’ at 315,000 years.

Not only do these species are peculiar with their lack of a bony skeleton when compared to the more recently evolved fishes, but they also have an unusual digestive system, featuring a spiral valve, where the lower intestine is twisted like a corkscrew to increase the surface area. They don’t have a swimming bladder either. Further, there are about 650 extant species, whereas the known bony fishes are estimated to be over 35,000.  

Most of the chondrichthyans are considered either ‘Critically Endangered’ (a classification a step below ‘Extinct’) or ‘Endangered’, according to the Red List of the International Union for Conservation of Nature (IUCN). The majority are also featured in the Convention on International Trade in Endangered Species.

As if to make matters worse, these fishes are also particularly susceptible to overfishing and have a low rate of growth and fecundity (females give birth to between 1 and 25 pups a year).

 

Original source:

Ehemann NR, González-González LV, Chollet-Villalpando JG, Cruz-Agüero JDL (2018) Updated checklist of the extant Chondrichthyes within the Exclusive Economic Zone of Mexico. ZooKeys 774: 17-39. https://doi.org/10.3897/zookeys.774.25028

New ‘scaly’ snails species group following striking discoveries from Malaysian Borneo

Six new species of unique land snails whose shells are covered with what look like scales have been described from the biodiversity hotspot of Malaysian Borneo by scientists Mohd Zacaery Khalik, Universiti Malaysia Sarawak, Kasper Hendriks, University of Groningen, Jaap Vermeulen, JK Art & Science, and Prof Menno Schilthuizen, Naturalis Biodiversity Center. Their paper is published in the open access journal ZooKeys.

Thanks to their conspicuous structures, the mollusks have been added to a brand new species group of land snails to be commonly known as the ‘scaly’ snails, so that they can be set apart from the rest in the genus Georissa. Why it is that only some of the species in the genus sport the unique ‘scales’, remains unknown.

Fascinated with the minute ‘scaly’ snail fauna of Borneo, the researchers carried out fieldwork between 2015 and 2017 to find out how these curious shells evolved. In addition, they also examined material deposited in museum and private snail collections.

Apart from DNA data, which is nowadays commonly used in species identification, the team turned to yet-to-become-popular modern tools such as 3D modelling, conducted through X-ray scanning. By doing so, the researchers managed to look at both the inner and outer surfaces of the shells of the tiny specimens from every angle and position, and examine them in great detail.

The researchers note that to identify the ‘scaly’ snails to species level, one needs a combination of both DNA and morphological data:

“Objective species delimitation based solely on molecular data will not be successful for the ‘scaly’ snails in Georissa, at least if one wishes for the taxonomy to reflect morphology as well.”

The six new species are all named after the localities they have been originally collected from, in order to create awareness for species and habitat conservation.

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Watch rotation and cross-section of the 3D models of the studied species here.

Original source:

Khalik MZ, Hendriks K, Vermeulen JJ, Schilthuizen M (2018) A molecular and conchological dissection of the “scaly” Georissa of Malaysian Borneo (Gastropoda, Neritimorpha, Hydrocenidae). ZooKeys 773: 1-55. https://doi.org/10.3897/zookeys.773.24878

A decade of ZooKeys: Publishing and communicating knowledge & love for zoology

So here we are, 10 years from that very first issue of ours published on a very special date – the 4th of July – and the result of a seemingly ordinary breakfast conversation between two respected entomologists, Prof Lyubomir Penev and Dr Terry Erwin, during the Entomological Society of America meeting in San Diego, USA, seven months earlier.

Then and there, under the California sun, an idea about a brand new taxonomic journal meant to revolutionise the scholarly publishing in zoology – in terms of both openness and technological innovation, was born. The rest, like they say, is history.

Ten years in, we stand as the most prolific open-access journal in zoology with a total of 4,103 published articles, 45 newly described animal families, 650 genera and 8977 species, authored by a total of 5,720 researchers coming from 131 different countries. We also take pride in having set an excellent example for the rest of the academic titles in Pensoft’s already extensive portfolio of open access journals.

Find more about our achievements and milestones in our special Editorial, authored by Editor-in-Chief Dr Terry Erwin, founder Prof Lyubomir Penev and Managing editor Prof Pavel Stoev as part of our anniversarial 770th journal issue.

Also, check out our press announcement for a quick sum-up.

 

In the present blog post, we’ll take the opportunity to look back on ZooKeys’ top appearances on ‘the big scene’, because we believe it’s nothing but our shared fondness and homage to the kingdom of animals which has brought us here. Most importantly, it’s also the key to getting to know, save and protect our planet’s priceless biodiversity.

Here are some cool displays of ZooKeys-inspired zoo-affection to remember:

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Remember the lacewing “starlet” (Semachrysa jade) with a “portfolio on Flickr”, as worded by news editor Catharine Smith in her piece in Huffington Post?

Photo courtesy: Guek Hock Ping (check out his work on Flickr).

The Hollywood-worthy beauty from the photos turned the heads of professional taxonomists in such a way that, with the help of citizen scientists, the team of  Dr Shaun Winterton, California Department of Food & Agriculture tracked down the insect all the way to Sabah, Malaysia, to subsequently describe it as a species new to science in 2012.

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In another insect love story, the Cupid beetle (Termitotrox cupido, also described in ZooKeys) found its match from our pages, when, three years later, its discoverer Dr Munetoshi Maruyama, The Kyushu University Museum, teamed up with Showtaro Kakizoe, Kyushu University to discover a new species of its very genus and give it the name Termitotrox venus.

 

Further, our own Twitter data from earlier this year suggests that the flightless beetles from Cambodia make a nice greeting card for Valentine’s Day!

 

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What’s not to love about fluffy mammals?

Beyond all our furriest dreams, in a world where everybody thought humans have found every single animal they’d like to add on their ‘To-pet’ wishlists, the smaller and, to be honest, cuter sibling of the tree-dwelling olingos had remained undercover up until 2013, when Prof. Kristofer M. Helgen of the Smithsonian’s National Museum of Natural History, and his team described the species Bassaricyon neblina, better known as the Olinguito.

 

Surprise, surprise: as a result, there’s now a special World Olinguito Day (look up #WorldOlinguitoDay on Twitter), which the world we’ll be celebrating for the fifth time around next month, on 15th of August.

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A bit less cuddly is the next spectacular species, which is also a first for science.

Photo courtesy: Somsak Panha

While centipedes can be found at various habitats, ranging from rainforests to deserts and pitch-black caves, Scolopendra cataracta still manages to impress with its unique taste for… water, as well as its giant size of up to 20 cm in length.

In fact, the species, described by the team of Dr Warut Siriwut, Chulalongkorn University, is the very first known amphibious centipede.

Moreover, it swims “powerfully like an eel,” George Beccaloni, who spotted the striking arthropod during his honeymoon in Thailand in 2001, told National Geographic.

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Nah, they’re just big teddy bears,” smiles tarantula expert Dr Chris Hamilton, when the Sky News’ presenter asks him whether his latest discovery is in any way dangerous, after seeing her interviewee drop the black spider on camera, during their LIVE Skype chat.

Video source: Newsy: https://www.newsy.com/

 

The reason why the “laid back” tarantula, described as Aphonopelma johnnycashi got all that attention, however, was the undeniable and all too curious similarities between the arachnid and its famous namesake, the singer-songwriter Johnny Cash.

 

The Johnny Cash tarantula happened to be discovered in California, precisely near Folsom Prison – the place from Cash’s famous song “Folsom Prison Blues”. Further, the all-black males of the species are reminiscent of the singer’s nickname – ‘The Man in Black’.

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At one hand, rupturing one own’s body apart in what could be best described as ‘an explosion’, so that a toxic liquid is shot into the enemy when confronted, might sound as a vicious act of violence.

Photo courtesy: Alexey Kopchinskiy

However, in social insects like the ants, and, more specifically, in a species of the so-called ‘exploding ants’, aptly named Colobopsis explodens, this is merely the way the minor worker caste of infertile females contributes to its colony when its survival is at stake.

Despite happening in the blink of an eye, the self-sacrificial act was documented on video available from BBC News, where the study’s lead author Alice Laciny, Natural History Museum of Vienna, gives further insight into the curious species from Borneo.

 

Did you see the video? No wonder it got everyone fascinated (including kids such as this young charming lady here!) enough to have the hashtag #ExplodingAnts become a thing on Twitter.

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To protect threatened with extinction species, we first need to learn about their existence. We’ve been hearing this a lot.

Photo courtesy: Vazrick Nazari

However, it’s easy to think of the fluffy olinguito if you happen to be someone responsible for the conservation of the montane rainforest of the Colombian and Ecuadorian Andes, for example.

 

But how do you draw the attention of the public and policy makers to a tiny and rarely seen species of moth living in a limited and highly populated and disturbed patch of land shared between the states of California, USA, and Baja California, Mexico?

Metrics available from Altmetric. The numbers account for publications from across online sources (i.e. news outlets, social media, blogs etc.) which cite the DOI link of the article. Check out detailed data in real time.

Simply name it after the US President-to-be, is what entomologist Dr. Vazrick Nazari must’ve thought while deciding on the name of his lepidopteran discovery, going by the name of Neopalpa donaldtrumpi.

“It inhabits endangered dune habitats – very fragile – and should be protected, the kind of motivation I needed to name it after Trump,” the scientist tells BBC Radio 5.

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As a final for our special anniversarial blog post, we’ve kept a few record-breakers. Who doesn’t love to be in first place, after all?

 

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Fitting about 10 times within the eye of a needle, the 0.86-millimetre Angustopila dominikae, known from China, became the world’s smallest land snail species when Dr Barna Páll-Gergely, Shinshu University, published it in ZooKeys on 28th September, 2015.

Photo courtesy: Dr. Barna Páll-Gergely and Nikolett Szpisjak

Yet, its fame wasn’t meant to last.

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It took only about a month for Acmella nana to steal the spotlight thanks to its even tiniest measures of 0.70 mm. The Malaysian species was described in ZooKeys by Prof Dr Menno Schilthuizen, Naturalis Biodiversity Center, and his team in addition to other 47 species, including endemic snails known from single localities, on 2nd November, 2015.

Photo courtesy: Menno Schilthuizen

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As if themed “The Year of the Smallest”, it was also at the end of 2015 when the smallest known free-living insect, called Scydosella musawasensis, was published with ZooKeys.

Photo courtesy: Alexey Polilov

To describe the 0.325-millimetre species, discoverer Dr. Alexey Polilov, Lomonosov Moscow State University, had to leave behind the preserved specimens and collect new material from the Chicaque National Park, Colombia, and, then, use a specialised software and digital micrographs to provide the exact measures.

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Fortunately, the world-record setters didn’t abandon ZooKeys with the conclusion of 2015.

In early 2016, we published the deepest-dwelling centipede, Geophilus hadesi, discovered in Croatia by the team of our Managing editor, Prof Pavel Stoev.

Photo courtesy: J. Bedek

Living at depths of 1,100 metres below the ground, the multi-legged creature surely lives up to its name inspired by the Greek god of the Underworld, Hades.

The species also comes as a nice complement to another cave-dweller of the same genus – Geophilus persephones, which carries the name of the mythological god’s wife, Persephone.

 

Did we overlook your own most beloved ZooKeys-published species? We’ll be happy for you to let us know about it in the Comments section below, Twitter (@ZooKeys_Journal) or Facebook (@ZooKeysJournal).

Museum collection reveals distribution of Carolina parakeet 100 years after its extinction

While 2018 marks the centenary of the death of the last captive Carolina parakeet – North America’s only native parrot, a team of researchers have shed new light on the previously known geographical range of the species, which was officially declared extinct in 1920.

Combining observations and specimen data, the new Carolina parakeet occurrence dataset, recently published in the open access Biodiversity Data Journal by Dr Kevin Burgio, , Dr Colin Carlson, University of Maryland and Georgetown University, and Dr Alexander Bond, Natural History Museum of London, is the most comprehensive ever produced.

The new study provides unprecedented information on the birds range providing a window into the past ecology of a lost species.

“Making these data freely available to other researchers will hopefully help unlock the mysteries surrounding the extinction and ecology of this iconic species. Parrots are the most at-risk group of birds and anything we can learn about past extinctions may be useful going forward,” says the study’s lead author, Kevin Burgio.

The observational recordings included in the study have been gleaned from a wide variety of sources, including the correspondence of well-known historical figures such as Thomas Jefferson and the explorers Lewis and Clark.

The study team referenced recorded sightings spanning nearly 400 years. The oldest recorded sighting dates back to 1564, and was found in a description of the current state of Florida written by Rene Laudonniere in 1602.

Alongside the written accounts, the researchers included location data from museum specimens. These include 25 bird skins from the Natural History Museum’s Tring site, whose skin collection is the second largest of its kind in the world, with almost 750,000 specimens representing about 95 per cent of the world’s bird species. Thereby, the study proves what invaluable resources museum collections can be.

“The unique combination of historical research and museum specimens is the only way we can learn about the range of this now-extinct species. Museums are archives of the natural world and research collections like that of the Natural History Museum are incredibly important in helping to increase our understanding of biodiversity conservation and extinction,” says Alex Bond.

“By digitising museum collections, we can unlock the potential of millions of specimens, helping us to answer some of today’s big questions in biodiversity science and conservation.”

It is hoped that this research will be the beginning of a wider reaching work that will explore further into the ecology of this long lost species.

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Original source:

Burgio KR, Carlson CJ, Bond AL (2018) Georeferenced sighting and specimen occurrence data of the extinct Carolina Parakeet (Conuropsis carolinensis) from 1564 – 1944. Biodiversity Data Journal 6: e25280. https://doi.org/10.3897/BDJ.6.e25280

Naming rights for 5 new snail-sucking snake species auctioned to save rainforests in Ecuador

Sibon bevridgelyi is arguably the prettiest of the lot. Photo by Alejandro Arteaga.

The existence of five delightfully weird snail-sucking snakes slithering through the forest floors of Ecuador was announced by a group of scientists in a study in the open access journal Zookeys.

Believe or not, there is an entire group of snakes for which snails are number one on their menu. This is why their jaws are modified in such a way that they can suck the viscous slimy body of a snail right out of its shell.

Dipsas bobridgelyi trying to suck a snail out of its shell. Photo by Matthijs Hollanders.

Luckily for us, these snakes are harmless to humans. However, humans are not harmless to them. Four out of the five newly discovered species are already facing the possibility of becoming extinct, as the forest remnants they call home are currently being destroyed.

In a bid to take care after the unfortunate reptiles, the scientists auctioned the naming rights for the new species at a recent event in New York City. The money are to purchase and save a previously unprotected 72 ha (178 acre) plot of land where some of these species live.

To do so, Fundación Jocotoco is to add the purchased plot to the Buenaventura reserve, in order to expand the only protected area where two of the new snakes are found, and prevent these endangered snake species from going extinct.

Dipsas bobridgelyi. Photo by Alejandro Arteaga.

Three of the five species were discovered during a series of expeditions to three rainforests in Ecuador between 2013 and 2017, conducted by Alejandro Arteaga, an Ecuadorian–Venezuelan PhD student at the American Museum of Natural History and scientific director of Tropical Herping, who partnered with Dr. Alex Pyron, The George Washington University and National Museum of Natural History, USA.

In another habitat type, the dry forest, Ecuadorian scientists Dr. Omar Torres-Carvajal, Pontificia Universidad Católica del Ecuador (PUCE), David Salazar-Valenzuela, Universidad Tecnológica Indoamérica, Diego Cisneros-Heredia, Universidad San Francisco de Quito, Juan Carlos Sánchez, Universidad del Azuay, Mario Yánez-Muñoz, Instituto Nacional de Biodiversidad  (INABIO), and Peruvian scientist Pablo Venegas, CORBIDI, noted the existence of the other two new species.

“We had to let people know that these cool snakes exist,” Alejandro said, “and that these species might soon stop to exist, and we need people’s help to protect the snake’s habitat.”

In order to confirm these five snakes as new species, the team of researchers, particularly Drs. Konrad Mebert, Universidade Estadual de Santa Cruz, Nicolás Peñafiel, Universidad Tecnológica Indoamérica, Gabriela Aguiar, Tropical Herping, and Timothy Colston, The George Washington University and National Museum of Natural History, USA, counted scales and gathered measurements from more than 200 museum specimens, and extracted DNA from nearly 100 snakes.

PhD student Alejandro Arteaga measured snake specimens at various museums, including the American Museum of Natural History in New York City.

Having made the highest bid at the auction, Rainforest Trust (RT) and Bob Ridgely got to name three of the five new snakes.

Thus, the species Dipsas georgejetti now honors George Jett, who supported the inception of Fundación Jocotoco’s reserves in Ecuador; while Dipsas bobridgelyi is a tribute to Dr. Robert “Bob” S. Ridgely, a leading ornithologist and distinguished conservationist who helped the establishment of the Buenaventura reserve. Bob, who was at the auction, chose the name Sibon bevridgelyi (Bev Ridgely’s Snail-Eater) to honor his father.

Dipsas georgejetti is found in only in dry forests in the coast of Ecuador. Photo by Alejandro Arteaga.

The remaining two snail-eating species, Dipsas oswaldobaezi and D. klebbai, were named after Dr. Oswaldo Báez and Casey Klebba, respectively, in recognition for their passion for Ecuador’s biodiversity and conservation.

Dipsas klebbai is the only one among the new species currently not threatened with extinction. Photo by Alejandro Arteaga.

“Several companies let you name a star after a loved one,” Alejandro says, “but, generally, such names have no formal validity. Naming an entire species after someone you love or admire is different. With few exceptions, this is the name that both the general public and the whole scientific community will use. So, why not let people choose the name of a species in exchange for a donation that protects its habitat?”

Dipsas oswaldobaezi photographed at Reserva la Ceiba. Photo by Jose Vieira.

The act of naming species is essential in raising awareness about the existence of a species and its risk of extinction, but it also provides an opportunity to recognize and honor the work of the people and institutions fighting to protect the species.

“Naming species is at the core of biology,” says Dr. Juan M. Guayasamin, co-author of the study and a professor at Universidad San Francisco in Quito. “Not a single study is really complete if it is not attached to the name of the species, and most species that share the planet with us are not described.”

“Everybody knows elephants and orangutans,” says Dr. Martin Schaefer of Fundación Jocotoco, “but some reptiles and amphibians are even more threatened. Yet, we still lack even the basic information to protect them better. This is why the work by scientists is so important; it provides the necessary information to guide our conservation decisions.”

“Through photography or by joining a scientific expedition, the general public can learn more about hidden biodiversity and how threatened it is,” says Lucas Bustamante of Tropical Herping. “This is a model to obtain support for research and conservation while recruiting more environmental ambassadors.”

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Find out more about the Tropical Herping’s scientific discoveries and expeditions on Instagram and Facebook.

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Watch the video below to follow entomologist and science communicator Phil Torres as he joins Alejandro Arteaga for one of his expeditions to document what it takes to find a new snake.

Academic paper:

Arteaga A, Salazar-Valenzuela D, Mebert K, Peñafiel N, Aguiar G, Sánchez-Nivicela JC, Pyron RA, Colston TJ, Cisneros-Heredia DF, Yánez-Muñoz MH, Venegas PJ, Guayasamin JM, Torres-Carvajal O (2018) Systematics of South American snail eating snakes (Serpentes, Dipsadini), with the description of five new species from Ecuador and Peru. ZooKeys 766: 79–147. https://doi.org/10.3897/zookeys.766.24523

In a hole in a tunicate there lived a hobbit: New shrimp species named after Bilbo Baggins

Digital illustration by Franz Anthony.

Two new species of tiny symbiotic shrimps are described, illustrated and named by biology student at Leiden University Werner de Gier as part of his bachelor’s research project, supervised by Dr. Charles H. J. M. Fransen, shrimp researcher of Naturalis Biodiversity Center (Leiden, the Netherlands).

Inspired by the extremely hairy feet of one of the species, the authors decided that they should honour Middle Earth’s greatest halfling, Bilbo Baggins.

Aptly named Odontonia bagginsi, the new shrimp joins the lines of other species named after Tolkien’s characters such as the cave-dwelling harvestman Iandumoema smeagol, the golden lizard Liolaemus smaug and the two subterranean spiders Ochyrocera laracna and Ochyrocera ungoliant.

Photo by Charles Fransen.

The newly described shrimps were collected during the Ternate expedition to the Indonesian islands of Tidore and Ternate, organised by Naturalis Biodiversity Center and the Indonesian Institute of Sciences (LIPI) in 2009.

Typically for the Odontonia species, the new shrimps do not reach sizes above a centimetre in length, and were found inside tunicates. It is believed that these symbiotic crustaceans are fully adapted to live inside the cavities of their hosts, which explains their small-sized and smooth bodies.

Photo by Charles Fransen.

Unlike most Odontonia species, which live inside solitary tunicates, the new species Odontonia plurellicola was the first one to be associated with a colonial tunicate. These tunicates have even smaller internal cavities, which explains the tiny size of the new species.

To determine the placement of the new species in the tree of life, the scientists compared the shrimps’ anatomical features, including the legs, mouthparts and carapace. As a result, they were assigned to Odontonia. Further, the available genetic information and Scanning Electron Microscope (SEM) images of the unusual feet of the newly discovered shrimp provided a new updated identification key for all members of the species group.

“Being able to describe, draw and even name two new species in my bachelor years was a huge honour. Hopefully, we can show the world that there are many new species just waiting to be discovered, if you simply look close enough!” says Werner de Gier, who is currently writing his graduate thesis at Naturalis Biodiversity Center and working together with Dr. Charles Fransen on crustaceans.

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Original source:

de Gier W, Fransen CHJM (2018) Odontonia plurellicola sp. n. and Odontonia bagginsi sp. n., two new ascidian-associated shrimp from Ternate and Tidore, Indonesia, with a phylogenetic reconstruction of the genus (Crustacea, Decapoda, Palaemonidae). ZooKeys 765: 123-160. https://doi.org/10.3897/zookeys.765.25277

Digital illustration by Franz Anthony.

How did coyotes conquer North America?

Coyotes now live across North America, from Alaska to Panama, California to Maine. But where they came from, and when, has been debated for decades.

Using museum specimens and fossil records, researchers from the North Carolina Museum of Natural Sciences and North Carolina State University have produced a comprehensive (and unprecedented) range history of the expanding species that can help reveal the ecology of predation as well as evolution through hybridization. Their findings are published in the open access journal ZooKeys.

The geographic distribution of coyotes has dramatically expanded since 1900, spreading across much of North America in a period when most other mammal species have been declining. Although this unprecedented expansion has been well-documented at the state/provincial scale, continent-wide picture of coyote spread been coarse and largely anecdotal. A more thorough compilation of available records was needed.

“We began by mapping the original range of coyotes using archaeological and fossil records,” says co-author Dr. Roland Kays, Head of the Museum’s Biodiversity Lab and Research Associate Professor in NC State’s Department of Forestry and Environmental Resources. “We then plotted their range expansion across North America from 1900 to 2016 using museum specimens, peer-reviewed reports, and game department records.”

In all, Kays and lead author James Hody, a graduate student at NC State University, reviewed more than 12,500 records covering the past 10,000 years for this study.

 Their findings indicate that coyotes historically occupied a larger area of North America than generally suggested in the literature. Previous maps, as it turns out, had ancient coyotes only located across the central deserts and grasslands. However, fossils from across the arid west link the distribution of coyotes from 10,000 years ago to specimens collected in the late 1800s, proving that their geographic range was not only broader but had been established for hundreds, perhaps thousands of years, which also contradicts some widely-cited descriptions of their historical distribution.

 It wasn’t until approximately 1920 that coyotes began their expansion across North America. This was likely aided by an expansion of human agriculture, forest fragmentation, and hybridization with other species. Eastern expansion, in particular, was aided by hybridization with wolves and dogs, resulting in size and color variation among eastern coyotes.

Before too long, coyotes may no longer be just a North American species. Kays notes that coyotes are continually expanding their range in Central America, having crossed the Panama Canal in 2010. Active camera traps are now spotting coyotes approaching the Darien Gap, a heavily forested region separating North and South America, suggesting that they are at the doorstep of South America.

 “The expansion of coyotes across the American continent offers an incredible experiment for assessing ecological questions about their roles as predators, and evolutionary questions related to their hybridization with dogs and wolves,” adds Hody.

“By collecting and mapping these museum data we were able to correct old misconceptions of their original range, and more precisely map and date their recent expansions.”

“We hope these maps will provide useful context for future research into the ecology and evolution of this incredibly adaptive carnivore,” he concludes.

 

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(Originally published on Eurekalert! by North Carolina Museum of Natural Sciences.)

 

Original source:

Hody JW, Kays R (2018) Mapping the expansion of coyotes (Canis latrans) across North and Central America. ZooKeys 759: 81–97. https://doi.org/10.3897/zookeys.759.15149

What is a species? British bird expert develops a math formula to solve the problem

Two different kinds of Lachrymose Mountain-Tanager (Anisognathus lacrymosus) occurring in Colombia on different mountain ranges (left: Santa Marta; right: Yariguies). Their measurements and songs were as distinct as those in the group which co-occur. Therefore, they can therefore be treated as different species.

Nature is replete with examples of identifiable populations known from different continents, mountain ranges, islands or lowland regions. While, traditionally, many of these have been treated as subspecies of widely-ranging species, recent studies relying on molecular biology have shown that many former “subspecies” have in fact been isolated for millions of years, which is long enough for them to have evolved into separate species.

Being a controversial matter in taxonomy – the science of classification – the ability to tell apart different species from subspecies across faunal groups is crucial. Given limited resources for conservation, relevant authorities tend only to be concerned for threatened species, with their efforts rarely extending to subspecies.

Figuring out whether co-habiting populations belong to the same species is only as tough as testing if they can interbreed or produce fertile offspring. However, whenever distinct populations are geographically separated, it is often that taxonomists struggle to determine whether they represent different species or merely subspecies of a more widely ranging species.

British bird expert Thomas Donegan has dedicated much of his life to studying birds in South America, primarily Colombia. To address this age-long issue of “what is a species?”, he applied a variety of statistical tests, based on data derived from bird specimens and sound recordings, to measure differences across over 3000 pairwise comparisons of different variables between populations.

Having analyzed the outcomes of these tests, he developed a new universal formula for determining what can be considered as a species. His study is published in the open-access journal ZooKeys.

Essentially, the equation works by measuring differences for multiple variables between two non-co-occurring populations, and then juxtaposing them to the same results for two related populations which do occur together and evidently belong to different “good” species. If the non-co-occurring pair’s differences exceed those of the good species pair, then the former can be ranked as species. If not, they are subspecies of the same species instead.

The formula builds on existing good taxonomic practices and borrows from optimal aspects of previously proposed mathematical models proposed for assessing species in particular groups, but brought together into a single coherent structure and formula that can be applied to any taxonomic group. It is, however, presented as a benchmark rather than a hard test, to be used together with other data, such as analyses of molecular data.

Thomas hopes that his mathematical formula for species rank assessments will help eliminate some of the subjectivity, regional bias and lumper-splitter conflicts which currently pervade the discipline of taxonomy.

“If this new approach is used, then it should introduce more objectivity to taxonomic science and ultimately mean that limited conservation resources are addressed towards threatened populations which are truly distinct and most deserving of our concern,” he says.

The problem with ranking populations that do not co-occur together was first identified back in 1904. Since then, most approaches to addressing such issues have been subjective or arbitrary or rely heavily upon expert opinion or historical momentum, rather than any objectively defensible or consistent framework.

For example, the American Herring Gull and the European Herring Gull are lumped by some current taxonomic committees into the same species (Herring Gull), or are split into two species by other committees dealing with different regions, simply because relevant experts at those committees have taken different views on the issue.

“For tropical faunas, there are thousands of distinctive populations currently treated as subspecies and which are broadly ignored in conservation activities,” explains Thomas. “Yet, some of these may be of conservation concern. This new framework should help us better to identify and prioritize those situations.”

Two different kinds of Three-striped Warblers (Basileuterus tristriatus) occurring in South America (left: East Andes of Colombia; right: a recently discovered population from the San Lucas mountains of Colombia). Note the differences in plumage coloration. While somewhat differing in voice, plumage and some measurements, the couple did not diverge as much as other related warblers that actually co-occur did. These are about as close as subspecies occurring on different mountain ranges could be. However, they marginally failed the proposed new benchmark for species rank.

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Original source:

Donegan TM (2018) What is a species? A new universal method to measure differentiation and assess the taxonomic rank of allopatric populations, using continuous variables. ZooKeys 757: 1-67. https://doi.org/10.3897/zookeys.757.10965

Additional information:

Donegan’s proposals were first presented orally at a joint meeting for members of the Neotropical Bird ClubBritish Ornithologists’ Club and Natural History Museum in London.