To avoid publication of openly accessible, yet unusable datasets, fated to result in irreproducible and inoperable biological diversity research at some point down the road, Pensoft takes care for auditing data described in data paper manuscripts upon their submission to applicable journals in the publisher’s portfolio, including Biodiversity Data Journal, ZooKeys, PhytoKeys, MycoKeys and many others. Once the dataset is clean and […]
More than 1,700 animal and plant specimens from the collection of eminent British geologist Sir Charles Lyell – known as the pioneer of modern geology – were organised, digitised and made openly accessible via the NHM Data Portal in a pilot project, led by Dr Consuelo Sendino, curator at the Department of Earth Sciences (Natural […]
Through their new collaboration, the partners encourage publication of dynamic additional research outcomes to support reusability and reproducibility in science In a new partnership between open-access Biodiversity Data Journal (BDJ) and workflow software development platform Profeza, authors submitting their research to the scholarly journal will be invited to prepare a Reuse Recipe Document via CREDIT Suite to encourage reusability and […]
Plazi has received a grant of EUR 1.1 million from Arcadia – the charitable fund of Lisbet Rausing and Peter Baldwin – to liberate data, such as taxonomic treatments and images, trapped in scholarly biodiversity publications. The project will expand the existing corpus of the Biodiversity Literature Repository (BLR), a joint venture of Plazi and Pensoft, hosted on Zenodo at CERN. […]
In an effort to improve the quality of biodiversity records, the Atlas of Living Australia (ALA) and the Global Biodiversity Information Facility (GBIF) use automated data processing to check individual data items. The records are provided to the ALA and GBIF by museums, herbaria and other biodiversity data sources. However, an independent analysis of such records reports that ALA […]
The leaf-mining pygmy moths (family Nepticulidae) and the white eyecap moths (family Opostegidae) are among the smallest moths in the world with a wingspan of just a few millimetres. Their caterpillars make characteristic patterns in leaves: leaf mines. For the first time, the evolutionary relationships of the more than 1000 species have been analysed on […]
Innovation in ‘Big Data’ helps address problems that were previously overwhelming. What we know about organisms is in hundreds of millions of pages published over 250 years. New software tools of the Global Names project find scientific names, index digital documents quickly, correcting names and updating them. These advances help “Making small data big” by […]
On October 13, 2015, we published a blog post about the novel functionalities in ARPHA that allow streamlined import of data papers from EML. Now, this process has been described in the Tips and Tricks section of the ARPHA Authoring Tool. Here, we’ll list the individual workflows: Import a data paper from GBIF IPT metadata (EML) […]
On October 20, 2015, we published a blog post about the novel functionalities in ARPHA that allows streamlined import of specimen or occurrence records into taxonomic manuscripts. Recently, this process was reflected in the “Tips and Tricks” section of the ARPHA authoring tool. Here, we’ll list the individual workflows: Upload occurrence or specimen data from a Darwin-Core-compliant […]
From the outside, it can seem that taxonomy has a commitment issue with scientific names. They shift for reasons that seem obscure and unnecessarily wonkish to people who simply want to use names to refer to a consistent, knowable taxon such as species, genus or family. However, the relationship between nomenclature and taxonomy, as two […]
