The beetle species Grebennikovius basilewskyi. Numbers next to arrows indicate patterns of phenotype statements explained in the section “Phenoscript: main patterns of phenotype statements”. Arrow numbers from T1 to T5 illustrate individual body parts. See more in the research study.
One of the most beautiful aspects of Nature is the endless variety of shapes, colours and behaviours exhibited by organisms. These traits help organisms survive and find mates, like how a male peacock’s colourful tail attracts females or his wings allow him to fly away from danger. Understanding traits is crucial for biologists, who study them to learn how organisms evolve and adapt to different environments.
To do this, scientists first need to describe these traits in words, like saying a peacock’s tail is “vibrant, iridescent, and ornate”. This approach works for small studies, but when looking at hundreds or even millions of different animals or plants, it’s impossible for the human brain to keep track of everything.
Computers could help, but not even the latest AI technology is able to grasp human language to the extent needed by biologists. This hampers research significantly because, although scientists can handle large volumes of DNA data, linking this information to physical traits is still very difficult.
To solve this problem, researchers from the Finnish Museum of Natural History, Giulio Montanaro and Sergei Tarasov, along with collaborators, have created a special language called Phenoscript. This language is designed to describe traits in a way that both humans and computers can understand. Describing traits with Phenoscript is like programming a computer code for how an organism looks.
Phenoscript uses something called semantic technology, which helps computers understand the meaning behind words, much like how modern search engines know the difference between the fruit “apple” and the tech company “Apple” based on the context of your search.
“This language is still being tested, but it shows a lot of promise. As more scientists start using Phenoscript, it will revolutionise biology by making vast amounts of trait data available for large-scale studies, boosting the emerging field of phenomics,”
explains Montanaro.
In their research article, newly published in the open-access, peer-reviewed Biodiversity Data Journal, the researchers make use of the new language for the first time, as they create semantic phenotypes for four species of dung beetles from the genus Grebennikovius. Then, to demonstrate the power of the semantic approach, they apply simple semantic queries to the generated phenotypic descriptions.
Finally, the team takes a look yet further ahead into modernising the way scientists work with species information. Their next aim is to integrate semantic species descriptions with the concept of nanopublications, “which encapsulates discrete pieces of information into a comprehensive knowledge graph”. As a result, data that has become part of this graph can be queried directly, thereby ensuring that it remains Findable, Accessible, Interoperable and Reusable (FAIR) through a variety of semantic resources.
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Research paper:
Montanaro G, Balhoff JP, Girón JC, Söderholm M, Tarasov S (2024) Computable species descriptions and nanopublications: applying ontology-based technologies to dung beetles (Coleoptera, Scarabaeinae). Biodiversity Data Journal 12: e121562. https://doi.org/10.3897/BDJ.12.e121562
What expert recommendations did the BiCIKL consortium give to policy makers and research funders to ensure that biodiversity data is FAIR, linked, open and, indeed, future-proof? Find out in the blog post summarising key lessons learnt from the Horizon 2020 project.
The intricate world beneath our feet holds secrets that are only now being unveiled, as researchers embark on a groundbreaking project to explore the hidden diversity of forest leaf litter beetles in Taiwan.
Forest leaf litter, often likened to terrestrial coral reefs, supports an astonishing variety of life. Among the myriad arthropods dwelling in this ecosystem, beetles emerge as the most common and speciose group. Despite their abundance, our understanding of leaf litter beetles remains limited due to the challenges posed by their sheer numbers, small sizes, and high local endemism.
Unlocking the Mystery with DNA Barcoding
To overcome these challenges, a team of researchers has initiated the Taiwanese Leaf Litter Beetles Barcoding project. Leveraging DNA barcoding, the project aims to create a comprehensive reference library for these elusive beetles. DNA barcoding, a technique using short mitochondrial fragments, accelerates the analysis of entire faunas and aids in the identification of species. The goal is to provide a valuable resource for researchers, ecologists, conservation biologists, and the public.
DNA voucher collection. Hu et al.
A Collaborative Journey with Taxonomists
The success of the Taiwanese Leaf Litter Beetles Barcoding project hinges on the invaluable contribution of taxonomists, who play a pivotal role in this groundbreaking research. Recognizing the specialized knowledge required for precise genus and species identifications, the researchers diligently consulted with specialists for each family represented in the extensive dataset.
In cases where these taxonomic experts provided crucial assistance, they were not merely acknowledged but offered co-authorship, acknowledging the significant commitment and expertise they bring to the project. Many taxonomists devote their entire lives to the meticulous study of specific beetle groups, and this collaboration underscores the importance of their dedication. The researchers emphasize the fairness of extending co-authorship to these taxonomic experts, acknowledging their indispensable role in advancing our understanding of Taiwan’s leaf litter beetle fauna.
Larva of Oodes (Lachnocrepis) japonicus. Hu et al.
Rich Beetle Diversity in Taiwan
Taiwan, nestled in the western Pacific, boasts a rich biodiversity resulting from its location at the crossroads of the Oriental and Palearctic biogeographical regions. Beetles, with over 7,700 recorded species belonging to 119 families, stand out as a particularly diverse insect order on the island. Despite this wealth of species, taxonomic research on beetles in Taiwan has been fragmented, and the study of leaf litter beetles has relied heavily on collections from past decades.
Larvae of Lagriascutellaris (OTU174) associated with adults by DNA. Hu et al.
The current dataset, based on specimens collected in the Huisun Recreation Forest Area in 2019–2021, comprises 4,629 beetles representing 334 species candidates from 36 families. The DNA barcoding approach has not only allowed for efficient species identification but has also provided a glimpse into the intricate world of beetle larvae, enhancing our understanding of their biology and ecological roles. This comprehensive dataset marks a significant step forward in unraveling the mysteries of Taiwan’s diverse beetle fauna.
Project Goals, Progress, and Future Outlook
The Taiwanese Leaf Litter Beetles Barcoding project is dedicated to a three-fold mission: conducting an extensive study of leaf litter beetles, documenting their diversity in Taiwan, and providing a reliable tool for quick identification. The researchers have published the first set of DNA barcodes, unveiling taxonomic insights such as the description of a new species and several newly recorded taxa.
Map of the samples collected in 2019–2023. Hu et al.
While the dataset is geographically limited to a single forest reserve in central Taiwan, it efficiently demonstrates the challenges of studying subtropical and tropical leaf litter beetle faunas. The integration of DNA barcoding and morphology proves instrumental in unraveling the mysteries of this species-diverse ecosystem. Looking ahead, the team plans to expand their sampling across Taiwan, covering diverse regions, altitudinal zones, and forest types.
Continuous updates to the DNA barcode dataset will serve as a valuable resource for future studies, maintaining a balanced approach that recognizes DNA barcoding as an efficient complement to traditional taxonomic methods.
Research article:
Hu F-S, Arriaga-Varela E, Biffi G, Bocák L, Bulirsch P, Damaška AF, Frisch J, Hájek J, Hlaváč P, Ho B-H, Ho Y-H, Hsiao Y, Jelínek J, Klimaszewski J, Kundrata R, Löbl I, Makranczy G, Matsumoto K, Phang G-J, Ruzzier E, Schülke M, Švec Z, Telnov D, Tseng W-Z, Yeh L-W, Le M-H, Fikáček M (2024) Forest leaf litter beetles of Taiwan: first DNA barcodes and first insight into the fauna. Deutsche Entomologische Zeitschrift 71(1): 17-47. https://doi.org/10.3897/dez.71.112278
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UC Berkeley entomologist Kipling Will discovered a specimen of Bembidion brownorum while sampling for insects near Freshwater Creek on former Gov. Jerry Brown’s ranch.
When University of California, Berkeley, entomologist Kipling Will first heard that former Gov. Jerry Brown was hosting field scientists on his Colusa County ranch, he jumped at the chance to hunt for beetles on the property.
“I reached out and said, ‘Hey, I want to sample your beetles,’” Will said. “And [Brown] was quite game to let me come up there.”
Will, a professor of environmental science, policy and management, has travelled to all corners of California to study carabid beetles, ground beetles that are important predators of other insects. But Will’s repeated visits to Brown’s ranch proved especially fruitful.
While sampling for insects near Freshwater Creek, Will collected a rare species of beetle that had never been named or described — and which, according to records, had not been observed by scientists in over 55 years. The new species will be named Bembidion brownorum, in honor of Brown and his wife, Anne Brown.
Former California Gov. Jerry Brown (right) and his wife, Anne Brown, with their dogs, Colusa and Cali, on the Browns’ Colusa County ranch. Photo courtesy Evan Westrup
“I’m very glad that [my ranch] is advancing science in some interesting and important ways,” said Brown, who has hosted a wild variety of field researchers, including geologists, anthropologists and botanists, on the property. “There are so many undiscovered species. I think it’s very important that we catalog and discover what we have and understand their impact on the environment — how it’s functioning and how it’s changing.”
Brown’s 2,500-acre ranch is about an hour’s drive north of Sacramento, in an agricultural region where most of the land is privately owned and insect biodiversity is historically understudied. For more than two years, Will has regularly sampled for insects on the ranch, sometimes even showing the beetles that he finds to the Browns.
Jerry Brown said his dedication to welcoming researchers onto his land is rooted in the ranch’s history as a stagecoach stop called Mountain House, and in his own interest in climate change and conservation.
“We don’t have stagecoach stop, but we have a place of gathering, of research and collaboration,” said Brown, who is currently chair of the California-China Climate Institute at UC Berkeley.
The location on Freshwater Creek where Kipling Will discovered the Bembidion brownorum beetle. Photo courtesy Kipling Will
After collecting a beetle at the ranch that didn’t resemble any species he was familiar with, Will called up Bembidion expert David Maddison, a professor of integrative biology at Oregon State University, to help identify the specimen. Together, the scientists used morphological and DNA analysis to confirm that the beetle represented a completely new species.
Will then combed through entomology collections at museums throughout California in search of other specimens that may have been unlabeled or misidentified. He found only 21 other specimens of the species, the most recent of which was collected in 1966.
UC Berkeley entomologist Kipling Will discovered a specimen of Bembidion brownorum while sampling for insects near Freshwater Creek on former Gov. Jerry Brown’s ranch. The species had not been observed by scientists in more than 55 years. Photo courtesy David Maddison
The lack of any more recent specimens indicated to him that the species likely collapsed during the second half of the 20th century, driven out of its natural habitat by rapid urbanization and agricultural development across the state.
“The sad truth is, [the species] has probably been in a huge decline. If you look at the places that it was found the ‘20s and ‘30s and ‘40s, almost none of that natural habitat is left,” Will said. “But we don’t know for sure. So, the thing to do is to get it out there, describe it and tell people, ‘Hey, look for this thing,’ because maybe we’ll find some place where it’s doing fine.
“Having access to Jerry’s ranch in Colusa County gives me the opportunity to really spend time sampling, to look for rare things like this.”
Will and Maddison describe Bembidion brownorum in a study published in the journal Zookeys.
Big for a Bembidion
To the naked eye, Bembidion brownorum isn’t particularly remarkable: The diminutive beetle is brown in color and measures around 5 millimeters in length, about the diameter of a standard pencil. But under magnification, it glows with a green and gold metallic shimmer.
The Bembidion brownorum beetle is approximately 5 millimeters long, slightly larger than other Bembidion beetles. The section of the insect behind the head, called the prothorax, is also larger than usual. Photo courtesy David Maddison
It was the unusual shape of the beetle’s prothorax, the segment of the insect that sits right behind its head, that first caught Will’s eye.
“I was looking at this one beetle thinking, ‘It just doesn’t fit any of the ones that I can identify,’” Will said. “The shape of prothorax is just not like any of the others.”
According to Maddison, Bembidion brownorum is also relatively large compared to other Bembidion beetles, which are usually closer to 3 to 4 millimeters in length.
“It’s big for a Bembidion,” Maddison said. “At first glance, it was pretty obvious that it was probably something new.”
With so few examples to study, it’s difficult to describe the lifestyle and behavior of Bembidion brownorum with any certainty, Will said. However, given where the beetle was found on Brown’s ranch — in the vicinity of Freshwater Creek, which occasionally dries into a series of trellis-like pools in the summer months — it is likely that the beetle lives near the edges of bodies of water that periodically flood and then evaporate.
The 21 historical specimens of Bembidion brownorum are housed at either the Essig Museum Entomology Collection at UC Berkeley or at the California Academy of Sciences in San Francisco, which both have insect specimens going back more than 100 years. The discovery highlights the vital importance of maintaining these collections for current and future research, the scientists said.
“One of the things that I find interesting about is that, before Kip found that specimen, there were already specimens in collections — there was this hidden diversity that people didn’t recognize,” Maddison said. “At one point, [the beetle] probably was much more widespread and much more common, and Kip and I have some ideas as to where you would target to try to find more.”
Drawers containing prepared specimens of carabid beetles that Kipling Will collected on Jerry Brown’s ranch. Photo courtesy Kipling Will
Previous specimens were collected at locations throughout the Central Valley and in the Los Angeles Basin, regions that have been transformed over the last century. While the beetle may still survive in some areas, Will said that the patchwork of private landownership may make it difficult to find.
“There is a lot of desire to conserve the environment and combat climate change, but in many cases, we’re not keeping up with the rate of extinction — we’re not able to describe the species that need to be described as fast as things are going extinct,” Will said. “And this certainly is true in California, where there are an awful lot of undescribed insects out there and not a lot being done to get them described. I think that having more knowledge of what they are and where they where they live is really fundamental.”
John S. Sproul of the University of Nebraska Omaha is also a co-author of the study. This research was supported by the Harold E. and Leona M. Rice Endowment Fund at Oregon State University.
Research article:
Maddison DR, Sproul JS, Will K (2023) Re-collected after 55 years: a new species of Bembidion (Coleoptera, Carabidae) from California. ZooKeys 1156: 87-106. https://doi.org/10.3897/zookeys.1156.101072
Press release originally published by Kara Manke, UC Berkeley. Republished with permission.
While insect populations continue to decline, taxonomic expertise in Europe is at serious risk, confirms data obtained within the European Red List of Insect Taxonomists, a recent study commissioned by the European Union.
Expertise tends to be particularly poor in the countries with the richest biodiversity, while taxonomists are predominantly male and ageing
While insect populations continue to decline, taxonomic expertise in Europe is at serious risk, confirms data obtained within the European Red List of Insect Taxonomists, a recent study commissioned by the European Union.
Scientists who specialise in the identification and discovery of insect species – also known as insect taxonomists – are declining across Europe, highlights the newly released report by CETAF, International Union for Conservation of Nature (IUCN) and Pensoft. The authors of this report represent different perspectives within biodiversity science, including natural history and research institutions, nature conservation, academia and scientific publishing.
Despite the global significance of its taxonomic collections, Europe has been losing taxonomic expertise at such a rate that, at the moment nearly half (41.4%) of the insect orders are not covered by a sufficient number of scientists. If only EU countries are counted, the number looks only slightly more positive (34.5%). Even the four largest insect orders: beetles (Coleoptera), moths and butterflies (Lepidoptera), flies (Diptera) and wasps, bees, ants and sawflies (Hymenoptera) are only adequately ‘covered’ in a fraction of the countries.
To obtain details about the number, location and productivity of insect taxonomists, the team extracted information from thousands of peer-reviewed research articles published in the last decade, queried the most important scientific databases and reached out to over fifty natural science institutions and their networks. Furthermore, a dedicated campaign reached out to individual researchers through multiple communication channels. As a result, more than 1,500 taxonomists responded by filling in a self-declaration survey to provide information about their personal and academic profile, qualification and activities.
Then, the collected information was assessed against numerical criteria to classify the scientists into categories similar to those used by the IUCN Red List of Threatened SpeciesTM. In the European List of Insect Taxonomists, these range from Eroded Capacity (equivalent to Extinct) to Adequate Capacity (equivalent to Least Concern). The assessment was applied to the 29 insect orders (i.e. beetles, moths and butterflies etc.) to figure out which insect groups the society, conservation practitioners and decision-makers need not be concerned at this point.
Overview of the taxonomic capacity in European countries based upon the Red List Index (colour gradient goes from red (Eroded Capacity) to green (Adequate Capacity). Image by the European Red List of Taxonomists consortium.
On a country level, the results showed that Czechia, Germany and Russia demonstrate the most adequate coverage of insect groups. Meanwhile, Albania, Azerbaijan, Belarus, Luxembourg, Latvia, Ireland and Malta turned out to be the ones with insufficient number of taxonomists.
In most cases, the availability of experts seems to correlate to GDP, as wealthiest countries tend to invest more in their scientific institutions.
What is particularly worrying is that the lack of taxonomic expertise is more evident in the countries with the greatest species diversity. This trend may cause even more significant problems in the knowledge and conservation of these species, further aggravating the situation. Thus, the report provides further evidence about a global pattern where the countries richest in biodiversity are also the ones poorest in financial and human resources.
The research team also reminds that it is European natural history museums that host the largest scientific collections – including insects – brought from all over the globe. As such, Europe is responsible to the world for maintaining taxonomic knowledge and building adequate expert capacity.
Other concerning trends revealed in the new report are that the community of taxonomists is also ageing and – especially in the older groups – male-dominated (82%).
“One reason to have fewer young taxonomists could be due to limited opportunities for professional training (…), and the fact that not all professional taxonomists provide it, as a significant number of taxonomists are employed by museums and their opportunities for interaction with university students is probably not optimal. Gender bias is very likely caused by multiple factors, including fewer opportunities for women to be exposed to taxonomic research and gain an interest, unequal offer of career opportunities and hiring decisions. A fair-playing field for all genders will be crucial to address these shortcomings and close the gap.”
comments Ana Casino, CETAF’s Executive Director.
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Entomologist examining a small insect under a microscope. Photo by anton_shoshin/stockadobe.com.
The European Red List of Taxonomists concludes with practical recommendations concerning strategic, science and societal priorities, addressed to specific decision-makers.
The authors give practical examples and potential solutions in support of their call to action.
For instance, in order to develop targeted and sustainable funding mechanisms to support taxonomy, they propose the launch of regular targeted Horizon Europe calls to study important insect groups for which taxonomic capacity has been identified to be at a particularly high risk of erosion.
To address specific gaps in expertise – such as the ones reported in the publication from Romania – a country known for its rich insect diversity, yet poor in taxonomic expertise – the consortium proposes the establishment of a natural history museum or entomological research institute that is well-fitted to serve as a taxonomic facility.
Amongst the scientific recommendations, the authors propose measures to ensure better recognition of taxonomic work at a multidisciplinary level. The scientific community, including disciplines that use taxonomic research, such as molecular biology, medicine and agriculture – need to embrace universal standards and rigorous conduct for the correct citation of scientific publications by insect taxonomists.
Societal engagement is another important call. “It is pivotal to widely raise awareness of the value and impact of taxonomy and the work of taxonomists. We must motivate young generations to join the scientific community” points Prof. Lyubomir Penev, Managing Director of Pensoft.
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“Understanding taxonomy is a key to understanding the extinction risk of species. If we strategically target the gaps in expert capacity that this European Red List identifies, we can better protect biodiversity and support the well-being and livelihoods of our societies. With the climate crisis at hand, there is no time left to waste,”
added David Allen from the IUCN Red List team.
“As a dedicated supporter of the IUCN Red List, I am inspired by this call to strengthen the capacity, guided by evidence and proven scientific methods. However, Europe has much more scientific capacity than most biodiversity-rich regions of the world. So, what this report particularly highlights is the need for massively increasing investment in scientific discovery, and building taxonomic expertise, around the world,”
said Jon Paul Rodríguez, Chair of the IUCN Species Survival Commission.
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Follow and join the conversation on Twitter using the #RedListTaxonomists hashtag.
… and 27 other new species of beetles discovered on Sulawesi Island
Many curious animals can be found on the Indonesian Island of Sulawesi – such as the deer-hog and the midget buffalo. But the island’s tropical forests hide a diversity of tiny insects that still remains largely unexplored. Museum scientists from Indonesia and Germany have just discovered 28 new species of beetles, all belonging to the weevil genus Trigonopterus.
Twenty-four newly discovered species of the genus Trigonopterus from Sulawesi. Image by Alexander Riedel
Most of the new species were collected by Raden Pramesa Narakusumo, curator of beetles at the Museum Zoologicum Bogoriense, from two localities of Central Sulawesi Province: Mt. Dako and Mt. Pompangeo. In fact, the forests on their slopes had never been searched for small weevils before.
A view from a ridge over the cloudy slopes of Mt. Pompangeo. Photo by Raden Pramesa Narakusumo
His research partner, Alexander Riedel of the Natural History Museum Karlsruhe, had been studying this genus for the past 15 years and was planning for a research trip to Papua New Guinea, when the COVID-19 pandemic hit. Finding himself grounded, he decided to work on the specimens from Sulawesi together with Narakusumo instead.
After diagnosing the new species, it was a challenge to find suitable names for them. One obvious choice was Trigonopterus corona, which reflects the large impact of the COVID-19 pandemic on this project. However, T. corona is by far not the first insect species with a pandemic-inspired name. In the last year, we’ve seen the species descriptions of the caddisfly Potamophylax coronavirus and the wasps Stethantyx covida and Allorhogas quarentenus.
Trigonopterus corona.
Trigonopterus ewok.
While some of the newly described species go by rather ‘standard’ names that derive from either the localities they have been collected from or their distinct characters, others were given a free pass to the Hall of Fame. Two of them were named after Indonesian movie characters (T. gundala and T. unyil), while T. ewok is another addition based on the Star Wars universe – perfectly in line with T. chewbacca, T. yoda and T.porg, all described between 2016 and 2019 by teams involving Riedel. The two-millimeter-long, rust-coloured Trigonopterus ewok was found at 1900–2000 m on Mt Pompangeo, hiding among the leaf litter in the forest.
But how come the critters have remained overlooked for so long? Almost all of these beetles measure only 2-3 millimeters, while most entomologists have a preference for the larger and strikingly looking stag beetles or jewel beetles.
A second factor is the superficial resemblance of many species: they are most easily diagnosed by their DNA sequences. Besides the publication in the open-access journal ZooKeys, high-resolution photographs of each species were uploaded to theSpecies ID website, along with a short scientific description. This provides a face to the species name, an important prerequisite for future studies.
R.P. Narakusumo during fieldwork at the top of Mt. Dako. Photo by Raden Pramesa Narakusumo
This is the duo’s second published paper on Trigonopterus weevils from Sulawesi – the first one describing the whopping 103 new species from the area. Currently, the known Trigonopterus species on the island amount to 132, which is likely a mere fraction of the real diversity. The numerous mountains of Sulawesi have a distinct fauna of endemics that have evolved over the past millions of years, and these wingless, flightless weevils, highly isolated in their habitats, are a good example of this diversification. Their evolution is interwoven with the island´s geological history. Riedel wants to increase the number of sampled localities:
“Once we have enough locality coverage and understand the weevils’ evolution, we can draw conclusions on the geological processes that formed the island of Sulawesi. This is a fascinating subject, because this island was formed by the fusion of different fragments millions of years ago.” The new species thus fill an important gap required for solving the island´s geological puzzle.
For the Indonesian side, it is equally important to obtain an inventory of species: “A large percentage of Indonesian biodiversity is yet unknown and we need names and diagnoses of species, so we can use these in further studies on conservation and bioprospecting,” says R. Pramesa Narakusumo. “Two of the newly described species came from our museum collection, and this underlines the importance of museums as a source for biological discoveries,” he added.
With many more new species of this genus to be expected, it is a lucky coincidence that the number of Star Wars characters is equally long. May the Force be with these researchers!
Research article:
Narakusumo RP, Riedel A (2021) Twenty-eight new species of Trigonopterus Fauvel (Coleoptera, Curculionidae) from Central Sulawesi. ZooKeys 1065: 29-79.https://doi.org/10.3897/zookeys.1065.71680
Michigan State entomologists have discovered dozens of new beetle species — and named some after iconic sci-fi heroines
The original Star Trek television series took place in a future when space is the final frontier, but humanity hasn’t reached that point quite yet. As researchers like Michigan State University entomologists Sarah Smith and Anthony Cognato are reminding us, there’s still plenty to discover right here on Earth.
Working in Central and South America, the duo discovered more than three dozen species of ambrosia beetles — beetles that eat ambrosia fungus — previously unknown to science. Smith and Cognato described these new species on June 16 in the journal ZooKeys.
The Spartans also selected an unusual naming theme named in deference to the female beetles who have helped their species survive and thrive by boldly going where they hadn’t before.
Many of the new species are named for iconic female science fiction characters, including Nyota Uhura of “Star Trek”; Kara “Starbuck” Thrace from the 2000s “Battlestar Galactica” TV series; and Katniss Everdeen from “The Hunger Games” books and movies.
The wing coverings of the C. katniss come to an arrowhead-like point, which reminded the researchers of Katniss Everdeen from “The Hunger Games,” shown below. “The Hunger Games” image courtesy of Lions Gate Entertainment Inc.
“But overall, our colleagues think it’s a good thing,” Cognato said. “It gives us a chance to talk about taxonomy — the science of classifying organisms — and about diversity.”
Understanding the world’s biodiversity is one of the major drivers of this and related research. Scientists estimate that there are 10 million nonbacterial species in the world and that humans have classified only about 20% of those.
“And some are lost before they’re ever discovered,” said Smith, who is the curator of the A. J. Cook Arthropod Research Collection. When people disrupt native ecosystems with farming and mining, for example, undiscovered species can face extinction before researchers know about them.
For this project, the team did some of its field work in Peru, where illegal gold miners can be particularly devastating to forests. “They’re turning the forest into a wasteland” Smith said. “It may never recover.”
Working in such threatened areas, Smith and Cognato are helping identify beetle species before it’s too late, as well as characterizing a rich variety of physical traits and behaviors.
To be clear, they did this field work long before the pandemic struck, starting around 2008. But it takes time to perform the thorough investigations required to ensure that a species is indeed distinct from its closely related cousins.
“With South America, it can be really hard to know whether a species is new or not, just because the fauna is so poorly studied,” Smith said.
With the stay-at-home orders in effect, she and Cognato had time to focus on projects that had been simmering on the backburner, such as this one that details ambrosia beetles they had collected belonging to the genus Coptoborus.
These tiny beetles make their homes by boring into trees. Once inside, they sustain their nests by cultivating fungus that serves as food. There, a mother produces many female offspring and one or two dwarfed males. The main job of those males is to mate with their sisters, creating a new generation of females prepared to disperse and produce a new brood. This all leads to another reason for studying these beetles: they can become pests.
These females arrive at trees ready to bore inside, start a fungus farm and reproduce. Though most prefer to nest in dead or dying parts of trees, some can attack fully healthy trees that are ecologically and economically important. For example, there are species within the genus known to attack balsa trees in Ecuador, the world’s leading exporter of balsa wood.
And if tree-dwelling beetles find their way into nonnative habitats, they can pose large threats to trees that have no natural defenses against the insects. Michiganders are all too familiar with the emerald ash borer, which has claimed millions of ash trees in the state. Another nonnative species of fungus-farming beetle devastated redbay laurels and avocado trees in the Southern U.S.
By identifying species abroad, in their native habitats, researchers including Smith and Cognato are helping the U.S. better prepare for if and when a new pest shows up here. And, historically speaking, Coptoborus beetles are hardy travelers.
The researchers thought the C. starbuck‘s appearance gave it a tough persona, leading them to name it for Kara “Starbuck” Thrace from “Battlestar Galactica,” shown on the right. “Battlestar Galactica” image courtesy of NBC Universal.
Their ancestors originated about 20 million years ago, likely in Southeast Asia, before emigrating and making homes across much of the tropics.
“That’s one of the reasons we chose to name them after female sci-fi characters. Not to anthropomorphize too much, but you have these adventurous females that were blown off their log or had their wood-encased home thrown into the ocean by a mudslide,” Cognato said. If these mated females made it to a new land, they could start a new population, allowing the species to proliferate.
“Along the way, there were so many ways to die, but they ended up colonizing an entire continent.”
Fast forward to now and there are thousands of ambrosia beetle species, including more than 70 of the Coptoborus genus — and counting. In christening the new beetles, Smith and Cognato got some inspiration by finding similarities between the beetle and its namesake.
For instance, the C. uhura was given its name because its reddish color, reminiscent of the uniform worn by Nichelle Nichols’s Uhura character in the original “Star Trek” TV series.
The C. uhura’s reddish hue reminded the researchers of the uniform worn by Lt. Uhura in the original “Star Trek” television series, shown below. “Star Trek” image courtesy of CBS Studios Inc.
And Sigourney Weaver’s Ellen Ripley character in the “Alien” film franchise had a shaved head in the movie “Alien 3.” One of the beetles, now named C. ripley, was also glabrous, or without hair.
The C. ripley is glabrous, which means hairless, reminding the researchers of Ellen Ripley and her shaved head in “Alien 3,” shown on the right. “Alien 3” image courtesy of Twentieth Century Fox.
Other names were selected because the duo just liked the characters and found them inspiring. For example, the C. scully beetle was named after Dana Scully, Gillian Anderson’s character on “The X-Files.”
The character is also behind what’s known as the “Scully Effect.” By showing a successful female scientist on TV, the show helped raise awareness of science, technology, engineering and mathematics — or STEM — professions among young women.
In their paper, Smith and Cognato wrote, “We believe in the ‘Scully Effect’ and hope future female scientists, real and fictional, continue to inspire children and young adults to pursue STEM careers.”
Smith and Cognato also took the opportunity to name some beetles in honor of real-life people who have made an impact on their work and their lives.
For example, the C. erwini, is named after a renowned entomologist and friend Terry Erwin, who passed away in 2020. Erwin helped popularize a technique called canopy fogging to collect beetle specimens living in treetops.
Coptoboruserwini
“Without his dedication to canopy fogging, this species and most of those described in this publication may never have been discovered,” Smith and Cognato wrote in their study, which is part of a special issue in memory of Erwin, who was also editor-in-chief of ZooKeys.
Also, the C. bettysmithae is named after Smith’s grandmother, Catherine “Betty” Smith. Sarah remembers Betty’s incredible strength in battling cancer and her help fostering her granddaughter’s scientific interest.
Some of the beetles were named for real-life inspirations, like the C. bettysmithae, named for Sarah Smith’s grandmother, Catherine “Betty” Smith.
“My grandmother supported me a lot with entomology,” Smith said. “I used to spend many weekends with her, and she’d take me out to catch dragonflies.”
Now, she and Cognato are out catching and characterizing insects that are new to science. In doing so, they’re helping protect native ecosystems, painting a more complete picture of the planet’s bountiful biodiversity and even drawing some attention to the power of naming and classifying things.
“Taxonomy was probably one of the first sciences of humans. You can find evidence of it throughout history and across cultures,” Cognato said.
This naming likely started so humans could easily share information about which plants were safe to eat and which animals were dangerous. This is still valuable information today, but naming has evolved to help us appreciate even more dimensions of life on Earth.
Think about being a kid in a park or backyard, Cognato said, and the innate desire to know and name the animals there, say, robins or squirrels. Classification builds connection.
“It helps us communicate and it helps us live better,” Cognato said. “It helps us understand the world and biodiversity.”
Original source:
Smith SM, Cognato AI (2021) A revision of the Neotropical genus Coptoborus Hopkins (Coleoptera, Curculionidae, Scolytinae, Xyleborini). In: Spence J, Casale A, Assmann T, Liebherr JК, Penev L (Eds) Systematic Zoology and Biodiversity Science: A tribute to Terry Erwin (1940-2020). ZooKeys 1044: 609-720. https://doi.org/10.3897/zookeys.144.62246
A worryingly high number of Asian bamboo longhorn beetles turn out to have been emerging across Europe for about a century already, finds an international research team. Curiously, the records of the invasive, non-native to the Old Continent species are mostly sourced from citizen scientists and online platforms, which proves the power of involving the public in species monitoring. The study is published in the open-access, peer-reviewed scientific journal BioRisk.
A worryingly high number of Asian bamboo longhorn beetles (Chlorophorus annularis) turn out to have been emerging across Europe for about a century already, finds an international research team, headed by researchers from the Center of Natural History, University of Hamburg, Germany. Curiously, the recent records of the invasive, non-native to the Old Continent species are mostly sourced from citizen scientists and online platforms, which proves the power of involving the public in species monitoring. The study is published in the open-access, peer-reviewed scientific journal BioRisk.
In our globalised world, which has already become victim to climate change and biodiversity loss, non-native species present a further threat to our ecosystems. Thus, the rising accounts of newly recorded alien species are of serious concern to both scientists and (inter)national institutions. However, surveying non-native species remains limited to a small fraction of species: those known to be particularly invasive and harmful.
One of the multitude of non-native species that are currently lacking efficient and coordinated surveying efforts is the Asian bamboo longhorn beetle (Chlorophorus annularis). Naturally occurring in temperate and tropical Southeast Asia, the insect feeds on a variety of plants, but prefers bamboo. Thus, due to the international trade of bamboo and the insects ‘travelling’ with the wood, the species has continuously been expanding its distribution around the world. Its first appearance in Europe was recorded back in 1924, when it was identified in England.
Bamboo longhorn beetle captured in Braintree, United Kingdom Photo by Stephen Rolls
Back to our days, during a fieldwork practice for students at the University of Hamburg, held within the city because of the COVID-19 travelling restrictions, the team stumbled across a longhorn beetle, later identified by scientists as the Asian bamboo borer. Furthermore, it became clear that there were even more recent records published across different citizen science platforms, such as iNaturalist, iRecord and Waarneming.nl. Having taken the contacts of the citizen scientists from there, the researchers approached them to ask for additional collection details and images, which were readily provided. As a result, the researchers formally confirmed the presence of the Asian bamboo borer in Belgium and the Netherlands. In total, they reported thirteen new introductions of the species in Europe, which translates to a 42% increase of the records of the species for the continent.
“In light of the warming climate and a growing abundance of ornamental bamboo plants in Europe, the beetle might get permanently established. Not only could it become a garden pest, but it could also incur significant costs to the bamboo-processing industry,”
comments Dr Matthias Seidel, lead author of the study.
Having realised the potential of citizen science for bridging the gaps in invasive species monitoring, the researchers now propose for specialised platforms to be established with the aim to familiarise non-professional scientists with non-native species of interest and provide them with more sophisticated reporting tools. The aim is to speed up the identification of important alien species by collating records of specific species of interest, which are flagged and regularly exported from other citizen science databases and platforms.
Bamboo longhorn beetle captured in Lincoln, United Kingdom Photo by Sheena Cotter
Original source:
Seidel M, Lüttke M, Cocquempot C, Potts K, Heeney WJ, Husemann M (2021) Citizen scientists significantly improve our knowledge on the non-native longhorn beetle Chlorophorus annularis (Fabricius, 1787) (Coleoptera, Cerambycidae) in Europe. BioRisk 16: 1–13. https://doi.org/10.3897/biorisk.16.61099
In recognition of the love and devotion that Terry expressed for the study of the World’s biodiversity, ZooKeys invites contributions to this memorial issue, covering all subjects falling within the area of systematic zoology. Titled “Systematic Zoology and Biodiversity Science: A tribute to Terry Erwin (1940-2020)”.
In tribute to our beloved friend and founding Editor-in-Chief, Dr Terry
Erwin, who passed away on 11th May 2020, we are planning a special
memorial volume to be published on 11 May 2021, the date Terry left us. Terry
will be remembered by all who knew him for his radiant spirit, charming
enthusiasm for carabid beetles and never-ceasing exploration of the world of
biodiversity!
In recognition of the love and devotion that Terry expressed for study of the World’s biodiversity, ZooKeys invites contributions to this memorial issue, titled “Systematic Zoology and Biodiversity Science: A tribute to Terry Erwin (1940-2020)”, to all subjects falling within the area of systematic zoology. Of special interest are papers recognising Terry’s dedication to collection based research, massive biodiversity surveys and origin of biodiversity hot spot areas. The Special will be edited by John Spence, Achille Casale, Thorsten Assmann, James Liebherr and Lyubomir Penev.
Article processing charges (APCs) will be waived for: (1) Contributions
to systematic biology and diversity of carabid beetles, (2) Contributions from
Terry’s students and (3) Contributions from his colleagues from the Smithsonian
Institution. The APC for articles which do not fall in the above categories
will be discounted at 30%.
The submission deadline is 31st December 2020.
Contributors are also invited to send memories and photos which shall be
published in a special addendum to the volume.
The memorial volume will also include a joint project of Plazi, Pensoft and the Biodiversity Literature Repository aimed at extracting of taxonomic data from Terry Erwin’s publications and making it easily accessible to the scientific community.
The newly described Ball’s stange-combed beetle (Nototylus balli) Photo by Terry L. Erwin
For 157 years, scientists have wished they could understand the evolutionary relationships of a curious South American ground beetle that was missing a distinctive feature of the huge family of ground beetles (Carabidae). Could it be that this rare species was indeed lacking a characteristic trait known in over 40,000 species worldwide and how could that be? Was that species assigned to the wrong family from the very beginning?
The species, Nototylus fryi,or Fry’s strange-combed beetle, is known so far only from a single, damaged specimen found in 1863 in the Brazilian State of Espíritu Santo, which today is kept in the Natural History Museum of London. So rare and unusual, due to its lack of “antennal cleaners” – specialised “combing” structures located on the forelegs and used by carabids to keep their antennae clean, it also prompted the description of its own genus: Nototylus, now colloquially called strange-combed beetles.
Left foreleg showing antennal grooming organs in the newly described Ball’s stange-combed beetle (Nototylus balli) Photo by Terry L. Erwin
No mention of the structure was made in the original description of the species, so, at one point, scientists even started to wonder whether the beetle they were looking at was in fact a carabid at all.
Because the area where Fry’s strange-combed beetle had been found was once Southern Atlantic Forest, but today is mostly sugar cane fields, cacao plantations, and cattle ranches, scientists have feared that additional specimens of strange-combed beetles might never be collected again and that the group was already extinct. Recently, however, a US team of entomologists have reported the discovery of a second specimen, one also representing a second species of strange-combed beetles new to science.
Following a careful study of this second, poorly preserved specimen, collected in French Guiana in 2014, the team of Dr Terry Erwin (Smithsonian Institution), Dr David Kavanaugh (California Academy of Sciences) and Dr David Maddison (Oregon State University) described the species, Nototylus balli, or Ball’s strange-combed beetle, in a paper that they published in the open-access scholarly journal ZooKeys. The entomologists named the species in honour of their academic leader and renowned carabidologist George E. Ball, after presenting it to him in September 2016 around the time of his 90th birthday.
Despite its poor, yet relatively better condition, the new specimen shows that probable antennal grooming organs are indeed present in strange-combed beetles. However, they looked nothing like those seen in other genera of ground beetles and they are located on a different part of the front legs. Rather than stout and barely movable, the setae (hair-like structures) in the grooming organs of strange-combed beetles are slender, flexible and very differently shaped, which led the researchers to suggest that the structure had a different role in strange-combed beetles.
Judging from the shapes of the setae in the grooming organs, the scientists point out that they are best suited for painting or coating the antennae, rather than scraping or cleaning them. Their hypothesis is that these rare carabids use these grooming structures to cohabitate with ants or termites, where they use them to apply specific substances to their antennae, so that the host colony recognises them as a friendly species, a kind of behaviour already known in some beetles.
However, the mystery around the strange-combed beetle remains, as the scientists found no evidence of special secretory structures in the specimen studied. It turns out that the only way to test their hypothesis, as well as to better understand the evolutionary relationships of these beetles with other carabids is finding and observing additional, preferably live, specimens in their natural habitat. Fortunately, this new discovery shows that the continued search for these beetles may yield good results because strange-combed beetles are not extinct.
***
Original source:
Erwin TL, Kavanaugh DH, Maddison DR (2020) After 157 years, a second specimen and species of the phylogenetically enigmatic and previously monobasic genus Nototylus Gemminger & Harold, 1868 (Coleoptera, Carabidae, Nototylini). ZooKeys 927: 65-74. https://doi.org/10.3897/zookeys.927.49584
A remarkable bioluminescent click beetle was discovered in the subtropical evergreen broadleaf forests in southwest China. Having prompted the description of a brand new subfamily, the species is the very first bioluminescent click beetle known from the continent.
A remarkable bioluminescent click beetle was discovered in the subtropical evergreen broadleaf forests in southwest China. Scientists Mr. Wen-Xuan Bi, Dr. Jin-Wu He, Dr. Xue-Yan Li, all affiliated with the Chinese Academy of Sciences (Kunming), Mr. Chang-Chin Chen of Tianjin New Wei San Industrial Company, Ltd. (Tianjing, China) and Dr. Robin Kundrata of Palacký University (Olomouc, Czech Republic) published their findings in the open-access journal ZooKeys.
Even though the family of click beetles (Elateridae) contain approximately 10,000 species worldwide, it is only about 200 species able to emit light, and they inhabit Latin America and Oceania. Interestingly, the position of the luminous organs varies amongst the different click beetle lineages. In some, they are found on the foremost of the three thoracic segments of the body (prothorax), in others – on both the prothorax and the abdomen, and in few – only on the abdomen.
Luminescent behavior of Sinopyrophorus schimmeli gen. et sp. nov. Video by Mr Wen-Xuan Bi.
“In 2017, during an expedition to the western Yunnan in China, we discovered a dusk-active bioluminescent click beetle with a single luminous organ on the abdomen, ” recalls lead scientist Mr. Wen-Xuan Bi.
Since no bioluminescent click beetle had previously been recorded in Asia, the team conducted simultaneous morphological and molecular analyses in order to clarify the identity of the new species and figure out its relationship to other representatives of its group.
Co-author Dr. Xue-Yan Li explains:
“The morphological investigation in combination with the molecular analysis based on 16 genes showed that our taxon is not only a new species in a new genus, but that it also represents a completely new subfamily of click beetles. We chose the name Sinopyrophorus for the new genus, and the new subfamily is called Sinopyrophorinae.”
In conclusion, the discovery of the new species sheds new light on the geographic distribution and evolution of luminescent click beetles. The authors agree that as a representative of a unique lineage, which is only distantly related to the already known bioluminescent click beetles, the new insect group may serve as a new model in the research of bioluminescence within the whole order of beetles.
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Original source:
Bi W-X, He J-W, Chen C-C, Kundrata R, Li X-Y (2019) Sinopyrophorinae, a new subfamily of Elateridae (Coleoptera, Elateroidea) with the first record of a luminous click beetle in Asia and evidence for multiple origins of bioluminescence in Elateridae. ZooKeys 864: 79-97. https://doi.org/10.3897/zookeys.864.26689
