Tag: ARPHA

Food Modelling Journal: New open-access venue provides a platform for food scientists

The open-access Food Modelling Journal (FMJ) was launched by the AGINFRA+ community and Pensoft with the aim to encourage food science specialists, agronomists and computer scientists to come together and work on assuring and improving food supply, quality and safety in our globalised and rapidly changing world.

An introductory editorial and an article of a unique publication type are already made available in the next-generation journal

The open-access Food Modelling Journal (FMJ) was launched by the AGINFRA+ community and Pensoft with the aim to encourage food science specialists, agronomists and computer scientists to come together and work on assuring and improving food supply, quality and safety in our globalised and rapidly changing world.

The Food Modelling Journal will be focusing on the publication of information objects and digital resources in the food science field, related (but not limited) to: food safety, food quality, food control, food defence and food design, documenting experimental or observational data and mathematical models.

By providing a platform and tools for describing scientific records and crediting for dedicated models, data, data analytics workflows and software, FMJ fosters the overall reproducibility and reusability of research.

FMJ also aims to shed light on what we refer to as research objects – data, software scripts, visualisation routines or models. Usually, they would stay undervalued, underused and uncredited, despite their importance for the scientific progress.

The focus and scope of the journal are supported by a number of specific key features:

Quality but not quantity
Cross-disciplinary approach
Open data and software code policy
Rapid turnaround time
Advanced open access and machine-readability.

It should be noted that the Open Science movement and the barrier-free access to research, is at the heart of the FMJ project.

To support its authors, the AGINFRA+ community, Pensoft and Food Modelling Journal have provided them access to the ARPHA Writing Tool, where researchers are able to work together with their co-authors, colleagues and peers on manuscripts from the drafting stage to publication.

A FSKX model run using the executable paper feature available in *Food Modelling Journal*.

A particularly appealing feature, meant to promote reproducibility, collaboration and openness in science, is the executable papers, where users can reproduce research findings using the published model and running it either with default or new parameters. By clicking an “Execute” button within the body of the article, users are taken to an external virtual environment where they will be able to execute the computation. By ‘encapsulating’ all the details needed to perform the action within the paper, this feature ensures that the published findings will remain testifiable in the future.

“While the long-lasting tradition in science used to focus on crediting researchers’ work through conventional research articles and especially by counting their citations, many exciting, useful and often invaluable products of the research cycle, such as data, software scripts, visualisation routines or models (usually called “research objects”) normally stay undervalued, underused and uncredited, despite their importance for scientific progress,” note the editorial board in the introductory editorial.

“The consequences of this neglect of the initial and intermediate steps of the research cycle in favour of the research articles or research books are obvious: scientists often repeat efforts done by others instead of using these as a stepping stone for further analyses and generating new knowledge, let alone the impossible or restricted reproducibility and reusability of research results,” they add.

The first paper of a unique publication type: FSKX (Food Safety Knowledge), is already publicly accessible in the journal. Classified as an early research outcome, the article presents a new generic model for assessing the risk of salmonellosis associated with the consumption of table eggs. To ensure the reusability of the model, the research team of Virginie Desvignes (ANSES – French Food Safety Agency) have made it available in the Food Safety Knowledge Markup Language (FSK-ML) format alongside the executable model script, visualisation script and simulation settings.

FSK-ML is an open information exchange format that is based on harmonised terms, metadata and controlled vocabulary to harmonise annotations of risk assessment models and that was significantly improved and extended during the AGINFRA+ project.

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Follow Food Modelling Journal on Twitter and Facebook.

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Food Modelling Journal is indexed by BASE, CNKI, CrossRef, Dimensions, Google Scholar, J-Gate, Mendeley, Microsoft Academic, Naviga (Softweco), OCLC WorldCat, OpenAIRE, OpenCitations, ReadCube, Transpose, Ulrichsweb™ and Unpaywall; and archived at CLOCKSS, Zenodo and Portico.

Strategic collaboration agreement signed between ScienceOpen and Pensoft

The research discovery platform ScienceOpen and Pensoft Publishers have entered into a strategic collaboration partnership with the aim of strengthening the companies’ identities as the leaders of innovative content dissemination. The new cooperation will focus on the unified indexation, the integration of Pensoft’s ARPHA Platform content into ScienceOpen and the utilization of novel streams of scientific communication for the published materials.

Pensoft is an independent academic publishing company, well known worldwide for bringing novelty through its cutting-edge publishing tools and for its commitment to open access practices. In 2013, Pensoft launched the first ever, end-to-end, XML-based, authoring, reviewing and publishing workflow, now upgraded to the ARPHA Publishing Platform. As of today, ARPHA hosts over 50 open access, peer-reviewed scholarly journals: the whole Pensoft portfolio in addition to titles owned by learned societies, university presses and research institutions.

As part of the strategic collaboration, all Pensoft content and journals hosted on ARPHA are indexed in the ScienceOpen’s research and discovery environment, which puts them into thematic context of over 60 million articles and books. In addition, thousands of articles across more than 20 journals were integrated into a “Pensoft Biodiversity” Collection. Combined this way, the content benefits from the special infrastructure of ScienceOpen Collections, which supports thematic groups of articles and books equipped with a unique landing page, a built-in search engine and an overview of the featured content. The Collections can be reviewed, recommended and shared by users, which facilitates academic debate and increases the discoverability of the research.

The Pensoft Biodiversity collection is available from: https://www.scienceopen.com/collection/PensoftBiodiversity

“It is certainly great news and a much-anticipated milestone for Pensoft, ARPHA and our long-year partners and supporters from ScienceOpen to have brought our collaboration to a new level by indexing the whole ARPHA-hosted content at ScienceOpen,” comments Pensoft’s and ARPHA’s CEO and founder Prof. Lyubomir Penev. “Most of all, the integration between ARPHA and ScienceOpen at an infrastructural level means that we will be able to offer this incredible service and increased visibility to newcoming journals right away. On the other hand, by streaming fresh and valuable publicly accessible content to the ScienceOpen database, these journals will be further adding to the growth of science in the open.”

Stephanie Dawson, CEO of ScienceOpen says, “I am particularly excited to add new high-quality, open access biodiversity content from Pensoft Publishers to the ScienceOpen discovery environment as we have a very active community of researchers on ScienceOpen creating and sharing Collections in this field. We are looking forward to working with Pensoft’s innovative journals to support their open science goals.”

The collaboration reflects not only the commitment of both Pensoft and ScienceOpen to new methods of knowledge dissemination, but also the joint mission to champion open science through innovation. The two companies will cooperate at a strategic level in order to increase the international outreach of their content and services, and to make them even more accessible to the broad community.

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About ScienceOpen:

From promotional collections to Open Access hosting and full publishing packages, ScienceOpen provides next-generation services to academic publishers embedded in an interactive discovery platform. ScienceOpen was founded in 2013 in Berlin and Boston by Alexander Grossmann and Tibor Tscheke to accelerate research communication.

All Pensoft journals indexed in Transpose to support transparency in journal policies

All open-access, peer-reviewed academic titles of Pensoft‘s, as well as those using the white-label publishing solution provided by the scholarly publishing platform ARPHA, have their journal policy data fed into the Transpose database, in order to increase their discoverability and transparency.

Thanks to the recent integration with the community-sourced initiative Transpose, details about each journal’s approach to peer review, co-review and preprint publication can be easily accessed, navigated and compared through a user-friendly interface. Visitors can also query the data by journal title, publisher, ISSN or DOI, and apply several filters.

Having estimated that almost 1/3 of the top-cited journals across disciplines do not provide clearly basic information about their editorial policies, including whether they operate blind peer review or not, the team behind Transpose launched the forward-thinking community-sourced initiative with the aim to advance practices in academia and increase awareness and transparency amongst authors, editors and many other stakeholder groups. To highlight the essentiality of free and easy access to editorial policies for a wide range of actors, Transpose have published user testimonials on their website coming from various points of view, including early researchers, supervisors, project investigators, funders, publishing staff, and others.

Recent integration of the scholarly publishing platform ARPHA and Transpose results in the editorial policies of all ARPHA-hosted journals being fed into the associated database. Thus, various stakeholders from across the academic landscape are provided with an easy access to details about the peer review, co-review and preprint policies at each journal via a user-friendly interface.

Pensoft and ARPHA’s founder and CEO Prof. Lyubomir Penev says:

“Having been Open Science advocates from the very beginning, at Pensoft and ARPHA, we have always supported our clients and users in being as transparent as possible. Favourite examples are the open-science journal Research Ideas and Outcomes (RIO), welcoming continuously updatable publications from across the whole research cycle, and Rethinking Ecology, launched to voice innovative and even bold ideas for the purposes of taking swift actions towards the conservation of the environment. The former operates public pre- and post-publication peer review to support efficient collaboration in research, while the latter relies on double-blind peer reviews, in order to encourage researchers of various experience and background to share their inventive ideas in ecology. Obviously, journal policies are and should be crucial when it comes to picking a specific journal over another regardless of the perspective. This is why I am certain that joining Transpose is doing good for all ARPHA-hosted journals, as well as the academic community.”

ASAPbio‘s Executive Director and member of the team behind Transpose, Dr Jessica Polka adds:

“We’re thrilled to incorporate data from Pensoft into Transpose. Making policy information clear and easy to find ensures that authors and reviewers can work with journals that best align with their values — and that scholarly work can be fairly interpreted by everyone, including general readers.”

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Additional information:

About Transpose:

Transpose is an initiative to build a database of journal policies. It focuses on three areas: open peer review, co-reviewing, and detailed pre-printing policies. It welcomes contributions from anyone, but seeks verification from journals and publishers. The goal of Transpose is to foster new practices while increasing awareness among authors, editors, and other stakeholders, and we seek to provide resources to assist journals in setting, sharing, and clarifying their policies.

Bulgarian Pharmaceutical Scientific Society’s journal moves to high-tech ARPHA platform

Bulgarian Pharmaceutical Scientific Society’s journal join the high-tech ARPHA platform and the fast-expanding portfolio of scholarly titles by Pensoft.Bulgarian Pharmaceutical Scientific Society’s journal join the high-tech ARPHA platform and the fast-expanding portfolio of scholarly titles by Pensoft.

The established Pharmacia demonstrates a complete makeover in its new issue after signing with scientific publisher and technology provider Pensoft and its signature open-access platform

Launched by the Bulgarian Pharmaceutical Scientific Society in 1954, the open-access, peer-reviewed Pharmacia has been available online as full text since 2007. As of 2019, the journal moves to the fast-expanding portfolio of scholarly publisher and technology provider Pensoft. The journal’s 2019 inaugural issue and the first since the realisation of the new partnership is already live on the journal’s new website.

Homepage of *Pharmacia*‘s new website, https://pharmacia.pensoft.net

Thanks to the Pensoft’s signature open-access scholarly publishing platform ARPHA, Pharmacia demonstrates a complete makeover, including a modern and user-friendly interface in addition to a long list of high-tech perks, meant to ensure that published articles are easy to discover, access, cite and reuse by both humans and machines all over the world.

Furthermore, all users of the journal’s system: authors, editors and reviewers alike, are to greatly benefit of ARPHA’s integrated approach to the publication process. This means that once submitted each manuscript goes through the whole cycle: from review and copy/layout editing to publication, dissemination and archiving without leaving ARPHA’s collaboration-focused online environment.

One of the interesting features now available in Pharmacia is the article-level metrics available thanks to the partnership between ARPHA and the revolutionary discovery and analytics tools Dimensions and Altmetric. By searching through millions of research articles, grant applications, clinical trials, as well as policy documents, news stories, blogs and social media posts, they allow for each article’s references and citations in both the academic and the public sphere to be monitored in real time.

Continuing its tradition, the journal welcomes original research and review articles, preliminary and short communications (notes) on a wide range of topics within the pharmaceutical and related sciences. In addition, the journal also publishes conference reports, biographies and book reviews. Articles in Pharmacia are published in English and subjected to single-blind peer review.

Pharmacia‘s Editor-in-Chief Prof Plamen Peikov, comments:

“We have been looking forward to our collaboration with Pensoft and ARPHA, as it is certainly going to not only help modernise Pharmacia on the outside, but also make it more appealing to our authors and readers by building on the journal’s accessibility and global outreach. I believe that this nice step forward is already clearly evident in Pharmacia‘s latest issue.”

ARPHA’s and Pensoft’s founder and CEO Prof Lyubomir Penev says:

“I’m delighted to see this particular journal joining the Pensoft’s and ARPHA’s family,” says ARPHA’s and Pensoft’s founder and CEO Prof. Lyubomir Penev. “With our strong background in scholarly publishing, technology development and open science practices, I am certain that we are able to provide the right venue for a high-quality and enterprising journal like Pharmacia.”

What’s on in the new issue?

The creeping cinquefoil – a perennial plant from the Northern hemisphere – has its status as a traditional medicine for treating diarrhoea, haemorrhoids and bleeding gums confirmed in a collaborative ethnobotanical study by researchers at the Bulgarian Academy of Sciences and the Medical University of Sofia (Bulgaria). Further, the team, led by Irena Mincheva, seek to explore the suggested use of the plant against mastitis: a relatively common disease and a major cause for milk reduction in both people and dairy cows.

Another paper, authored by Dr Illya Podolsky and Sergiy Shtrygol from the National University of Pharmacy in Ukraine, adds new information about “the pharmacological nature” of a molecule already known as a promising antidepressant with a unique spectrum of additional properties. By conducting an experiment in rats, using the preferred Morris water maze assessment method, the scientists study the effects of Atristamine on spatial memory and learning.

*Pharmacia*‘s latest issue is available on the new website. Available in HTML, XML and PDF formats, the articles are easy to find, access, mine, reuse and cite by both humans and computers. Check out the issue at: https://pharmacia.pensoft.net/issue/1757/.

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Pharmacia is indexed byScopus, Altmetric, Biotechnobase, CAplusSM/Chemical Abstracts, CNKI, CrossRef, Dimensions, EBSCOhost, Embase, ExtraMED, Google Scholar, J-Gate, MEDLINE/PubMed, Mendeley, Microsoft Academic, Naviga (Softweco), OpenAIRE, Pascal, ReadCube, Toxcenter, Unpaywall.

About the Bulgarian Pharmaceutical Scientific Society:

The Bulgarian Pharmaceutical Scientific Society was registered in 2003 with the aim to organise national and international science forums, support education and publish academic literature. Its main objectives are to organise and encourage pharmacological research and support collaboration between pharmacology professionals and related organisations on both national and global level.

Austrian Herpetological Society’s journal Herpetozoa moves to Pensoft’s ARPHA platform

Newly published research articles demonstrate numerous innovative features to the benefit of readers, authors and all other users

Published since 1988 by the Austrian Herpetological Society (ÖGH, Österreichische Gesellschaft für Herpetologie), the renowned peer-reviewed, open-access Herpetozoa is added to the growing portfolio of international scientific journals published on the ARPHA scholarly platform, as a result of a new partnership with scholarly publisher and technology provider Pensoft.

Follow Herpetozoa on Twitter and Facebook.

As before, Herpetozoa welcomes original research articles, short contributions and reviews covering all aspects of the study of amphibians and reptiles. The papers are published in English, whereas a translation of the abstract into German may also be included. The journal operates a single-blind peer review policy.

Thanks to the fast-track and convenient publishing provided by ARPHA, each manuscript is carried through all stages from submission and reviewing to dissemination and archiving without ever leaving the platform’s collaboration-friendly online environment.

Right underneath the new sleek look and feel welcoming users from the journal’s homepage, there are a lot of high-tech perks to benefit authors, readers, reviewers and editors alike.

Furthermore, all publications are available in three formats (PDF, XML, HTML), complete with a whole set of semantic enhancements, so that the articles are easy to find, access and harvest by both humans and machines.

Editor-in-Chief of Herpetozoa, Dr Günter Gollmann states:

“We decided to move to Open Access online publishing to increase the visibility of our journal, and to speed up the publication process. The highly attractive presentation provided by Pensoft should boost attention for the papers we publish. While Herpetozoa welcomes contributions of any length on all topics in herpetology, I hope that authors will appreciate the suitability of the new format for data-rich studies in natural history. Such research is often dismissed as “too descriptive” by other international journals, but is essential for conservation of biodiversity.”

ARPHA’s and Pensoft’s founder and CEO Prof Lyubomir Penev says:

“I am pleased to see Herpetozoa having found its new home on the ARPHA platform amongst all Pensoft journals and other highly reputed academic titles from around the globe. With our own strong background in zoological sciences, I am certain that our partnership with Herpetozoa will be quick to prove fruitful to both of us, but most importantly, to all readers, authors, editors and reviewers alike.”

With its move to the open-access, technologically advanced scholarly publishing platform, Herpetozoa lines up next to historical and well-known society journals, including Deutsche Entomologische Zeitschrift, Alpine Entomology (previously Journal of the Swiss Entomological Society), Journal of Hymenoptera Research, Zoologia and others, which have all chosen to modernise with the help of ARPHA.

What’s new on Herpetozoa?

Amongst the first batch of articles published in Herpetozoa in partnership with ARPHA/Pensoft, there is an Italian study tracking the long-disputed origin of the Mediterranean-native common chameleon (Chamaeleo chamaeleo) back to its ancestors in North Africa and the Middle East. Another paper by a research team from Romania compares the effects of carnivore, vegetarian and omnivorous diets on the growth, development and mortality in tadpoles of the common toad. In their study of the South American frog species Leptodactylus fuscus, scientists from Universidade Federal de Mato Grosso do Sul (Brazil) compare the diet of a population living in the wild with another one, which inhabits an urban environment. Their aim was to determine the impact urbanisation could be having on this otherwise abundant amphibian.

Distribution of the common chameleon in Salento (southern Italy) in 2018. Black dots represent observation localities (Basso et al. 2019).
Study openly accessible at:
https://doi.org/10.3897/herpetozoa.32.e35611

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Herpetozoa is indexed in Biological Abstracts; BIOSIS (Previews); Current Contents – Agricultural, Science Citation Index (Expanded); Web of Science; Zoological Record (Plus). Currently, its Journal Impact Factor stands at 1.125.

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About the Austrian Herpetological Society:

The Austrian Herpetological Society (Österreichische Gesellschaft für Herpetologie, ÖGH) was founded in 1984 to advance all branches of herpetology. The society supports scientific research and promotes conservation of amphibians and reptiles, as well as their habitats. To raise public awareness of these animal groups, ÖGH organizes meetings and excursions and publishes the journals Herpetozoa and ÖGH-Aktuell.

Russia’s NaRFU moves its Arctic Environmental Research journal to new-age ARPHA Platform

In its latest issue, the Northern (Arctic) Federal University’s open-access journal demonstrates a brand new look and a range of high-tech innovations

Formerly known as Bulletin of the Pomor University and Bulletin of the Northern (Arctic) Federal University, the open-access peer-reviewed journal published by Russia’s Northern (Arctic) Federal University (NArFU) recently changed its name to Arctic Environmental Research (AER) to accentuate its international relevance. Now, it also accommodates a whole set of novelties and innovations as a result of its move to the journal platform ARPHA.

Its first issue in collaboration with the revolutionary publishing solution, developed by scholarly publisher and technology provider Pensoft, is already live on the journal’s new website.

Launched in 2012, AER continues to provide a scholarly venue for publication of research findings related to the Arctic and adjacent areas, in order to draw attention to the most relevant, promising and interesting findings from the region, and facilitate exchange of scientific information on an international level.

Traditionally, the journal covers a wide range of disciplines, including geology, geodesy and cartography, geoinformatics, geoecology, engineering geology, permafrost and soil science, prospecting and exploration of solid minerals, oil and gas fields, biogeography, botany, microbiology, zoology, genetics, ecology, hydrobiology, parasitology, mycology, soil science, biological resources. Its focus is placed on original research based on field or laboratory experiments and mathematical modeling of processes taking place in high latitudes.

Thanks to its collaboration with ARPHA platform, the journal has already implemented a long list of high-tech perks in addition to its brand new sleek and modern look and feel.

To the benefit of authors, reviewers, editors and readers alike, the fast-track and convenient publishing workflow provided by ARPHA takes care for each manuscript all the way from submission and reviewing to dissemination and archiving without ever leaving the platform’s singular collaboration-friendly online environment.

Once published, all articles in AER are to be available in three formats (PDF, XML, HTML), enriched with a whole set of semantic enhancements, so that the articles are easy to discover, access and harvest by both humans and machines.

Amongst the high-tech widgets at disposal to anyone who accesses an article in the revamped journal are the article-level metrics available thanks to the partnership between ARPHA and the revolutionary discovery and analytics tools Dimensions and Altmetric. By searching through millions of research articles, grant applications, clinical trials, as well as policy documents, news stories, blogs and social media posts, they allow for each article’s references and citations in both the academic and the public sphere to be monitored in real time.

“I am truly delighted to welcome Arctic Environmental Research to ARPHA’s family,” says ARPHA’s and Pensoft’s founder and CEO Prof. Lyubomir Penev. “Being proven pioneers on the scholarly publishing scene in addition to our strong presence in environmental science, at ARPHA we believe that our white-label publishing solution makes a perfect match for forward-thinking institutions such as the NArFU and AER.

“We are starting our cooperation with the scholarly publisher and technology provider Pensoft and moving to the journal ARPHA platform,” says NArFU’s Vice rector for scientific work and AER’s Deputy Editor-in-Chief Dr. Boris Filippov. “We believe that it will help us fulfil the aims of AER, i.e. draw the scientists’ attention to the most relevant, interesting, and promising areas of research in the Arctic and adjacent territories, as well as promote information exchange in the international scientific arena.”

AER is the fourth Russian journal to find its new publishing home with ARPHA Platform after Comparative Cytogenetics, Research results in Pharmacology and Russian Journal of Economics. Several new titles are expected to join them later this year.

Economics journals hosted on ARPHA to have their content indexed at RePEc

The first to take advantage of the service is the most recent addition to the journal platform’s portfolio — Russian Journal of Economics

Following the recent integration between ARPHA and the collaborative project RePEc (Research Papers in Economics), journals publishing in economics will have their articles indexed in RePEc decentralised bibliographic database upon moving to the technologically advanced platform.

Working with 50,000 registered authors from around the globe, having indexed about 2.3 million research publications from 2,800 journals, and serving over 80,000 email subscriptions on a weekly basis, RePEc’s services are set to further increase the discoverability and creditability of economics papers published in any ARPHA-hosted journal.

The collaboration was inspired by the recent move of the open access peer-reviewed Russian Journal of Economics to ARPHA. Shortly after appearing on the journal’s new website provided by the platform, RuJE’s first 2018 issue, themed ‘The Austrian School of Economics: Its Reception in European Countries,’ was also available via the RePEc’s web interfaces, including IDEAS.

“Having added yet another web-service integration to the list, ARPHA once more demonstrates its flexibility and customer-oriented approach when it comes to providing a new home for journals looking to step up and provide all those innovative and high-tech features to their users,” says ARPHA’s and Pensoft’s founder and CEO Prof. Lyubomir Penev. “In times where the findability of a research publication is almost as important as its quality, I am certain that our integration with RePEc will significantly benefit our clients specialising in economics.”

Speaking in Novosibirsk, Russia, the founder of RePEc, Thomas Krichel noted, “When I set out what would become RePEc in the early 1990, my vision was of a non-proprietary system that all could contribute to, and that all could use freely. My particular concern was to level the playing field between publishers. Open access content is particularly valuable. I am pleased that ARPHA has chosen that publishing avenue.”

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Additional information:

About RePEc:

RePEc (Research Papers in Economics) is a collaborative effort of hundreds of volunteers in 96 countries to enhance the dissemination of research in economics and related sciences.

The heart of the project is a decentralised bibliographic database of working papers, journal articles, books, books chapters and software components, all maintained by volunteers. The collected data are then used in various services that provide the collected metadata to users or enhance it.

So far, over 1,900 archives from 96 countries have contributed about 2.3 million research pieces from 2,800 journals and 4,500 working paper series. About 50,000 authors have registered and 75,000 email subscriptions are served every week.

RePEc grew out of the NetEc project founded by Thomas Krichel in 1993.

Journal platform ARPHA partners with Dimensions to deliver extra citation data and insight

Citation count per individual publication is only a part of the useful and comprehensive data freely available for any articles published in a journal hosted on the ARPHA Platform, thanks to a new integration of the recently launched Dimensions badges.

The badges, which provide a citation count and further context on when and where an item was cited, further enhance the familiar citation insights already available from ARPHA. These include a current list of all papers referencing a particular article straight from major databases Crossref, Google Scholar, Scopus and PubMed Central.

To provide an additional in-depth insight into a paper’s impact, while placing it into a relevant context, Dimensions searches through over 90 million publications, and 873 million citations indexed in its own massive database. Going beyond the conventional research article, the tool also provides links to related grants, clinical trials, patents and policy documents.

A single click on the Metrics tab within the menu of any article in an ARPHA-published journal reveals the new eye-catching Dimensions badge, where it appears beneath the popular colourful “donut” of Altmetric – another research analytics innovation developed by Digital Science.

At a glance, the visitor can see the total and recent (from the last two calendar years) count of citations, in addition to the Field Citation Ratio and Relative Citation Ratio – designed to help users see how the article compares in a given field.

In a useful information page, the Dimensions team explains what these values stand for. For example, an article with a Citation Ratio of 0.8 has a count of citations considered as average for its subject area. The 1.2 is the watershed, beyond which a publication is deemed highly cited. Once at the 5-point mark, the number of citations is to be read as extremely high.

A second click on the badge brings up the Dimensions Details Page, where the reader can find a new set of citation data, including an interlinked list of the publications that have cited the paper, as well as their distribution over time and across research categories.

“There is no doubt that citation count and real-time, real-life impact within both the scientific community and the public space are essential for any scientist,” said ARPHA’s founder and CEO Prof. Lyubomir Penev. “In this sense, analytical and user-friendly tools, such as Dimensions and Altmetric, come to bridge a crucial gap – one which could easily make-or-break a researcher’s career and image in academia.”

“I am pleased to ensure that any author who has ever published with our journals can easily and openly track and demonstrate the actual performance of their work,” he added.

Christian Herzog, who led the Dimensions project at Digital Science, said “The Dimensions badges were developed to aid the research community in assessing and contextualizing publications. We’re happy to partner with ARPHA and contribute additional value to their platform.”

Learn about the partnership between ARPHA and Altmetric here.

Pensoft’s ARPHA teams with Hypothesis to encourage scientific discourse through annotation

In a new integration, the Pensoft-developed innovative journal publishing platform ARPHA teams up with nonprofit, open-source annotation technology provider Hypothesis to further enable academic discussion and foster collaboration in the spirit of open science practices.

This partnership makes Pensoft the second publisher to implement this technology across its whole journal portfolio.

Current and future scholarly journals using ARPHA, including Research Ideas and Outcomes (RIO Journal), ZooKeys, One Ecosystem, Journal of Hymenoptera Research and others, will have a new layer added to their content, so that anyone registered with Hypothesis will be able to add public sentence-level annotations within any publication and use it as a starting point for further discussions. All annotations are stored at Hypothesis and listed in the user’s account.

Upon opening an article published in any ARPHA journal, website visitors can now spot a dialog-box icon in the top-right of the screen showing the number of submitted annotations, which he/she can reply to at the click of a button. Annotations appear highlighted within the webpage whenever a user is logged into their account on Hypothesis.

Alternatively, the user can simply select some text and add a note to share his/her own idea, feedback, opinion or question inspired by the publication. Thus, the content of the research paper becomes alive, while readers could contribute to the study’s discourse.

“I am delighted to see ARPHA partnering with Hypothesis not only because this benefits our users and journals, but because it also works for the good of science and academia in general,” comments Pensoft’s and ARPHA’s founder and CEO Prof. Lyubomir Penev.

“What we’ve learned from implementing Open Science more and more vigorously in research practices is that striving for transparency and easier collaboration only stimulates scientific progress,” he adds. “One way to do this is definitely by providing the right platforms for giving and addressing feedback.”

Dan Whaley, CEO at Hypothesis, adds:

“We’re excited to see annotation brought to the many publications on the ARPHA platform. As an early member of the Annotating All Knowledge Coalition with a strong commitment to open research and transparent data, Pensoft shares Hypothesis’ commitment to facilitating conversations around scholarly content and improving researcher workflow. We look forward to working with the journal editors to integrate annotation into existing workflows to maximize the success of this initiative.”

For a better grasp of the Web Annotation Architecture, as seen by the World Wide Web Consortium (W3C), see their interactive infographic.

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About Hypothesis:

Hypothesis is a US 501(c)3 nonprofit organization dedicated to the development and spread of open, standards-based annotation technologies and practices that enable anyone to annotate anywhere, helping humans reason more effectively together through a shared, collaborative discussion layer over all knowledge. Hypothesis is based in San Francisco, CA with a worldwide team. Learn more from <web.hypothes.is>.

Track changes and easy comparison of manuscript versions now available in ARPHA Writing Tool

Monitoring the progress of your manuscript has never been easier!

The eagerly anticipated Track changes feature is now available in ARPHA Writing Tool to further facilitate collaborative authoring in the five academic journals* which currently make use of the ARPHA-XML publishing workflow.

Having tapped into ARPHA’s users constructive feedback, we have also updated our Revision History feature. Now, not only can authors access any past version, as created by their co-authors and collaborators, but they can also compare any two of these at the click of a button.

Track changes

To let co-authors and collaborators easily see any changes they have made, a user needs to simply switch on the Track changes mode. From now on, each individual author’s input will be highlighted to draw the attention of the next user.

Logically, any newly inserted text will appear in green, while the deleted one will be coloured in red. A hover over a highlighted text will show the user who has made the edit.

To make overseeing even a single edit impossible, ARPHA Writing Tool has made it mandatory for a user to resolve all suggested changes before either submitting the manuscript or switching off the Track changes mode.

Not overlooking any new input, regardless of the length and complexity of a manuscript, is made even easier thanks to the Prev and Next buttons allowing a user to go through the changes one by one.

But what shall you do if you or your co-authors/collaborators happen to forget to switch on the Track changes mode?

Compare Manuscript Versions

Our latest update to the Revision history button lets users compare any two past manuscript versions, so that they can see at a glance what has changed between any two set points in time.

Just like before, clicking the Revision history button delivers a list of all manuscript versions along with the users who have created them in a chronological order. Now, however, a tick box next to each of these allows the user to select any two versions and see all edits that have taken place in between.

Again, newly added text shows in green, while the deleted text is crossed over and appears in red.

Step-by-step instructions on both how to track changes and compare past versions are available in the Tips and Tricks guidelines accessible anytime in the header of the writing tool.

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*The open access scholarly journals Biodiversity Data Journal, Research Ideas and Outcomes (RIO Journal), One Ecosystem, BioDiscovery and Biodiversity Information Science and Standards (BISS) are all making use of the technologically advanced collaboration-centred ARPHA-XML workflow, which features the signature ARPHA Writing Tool.