Tag: biodiversity

The first crowdfunded study in Japan: Micro X-ray observation of a fleshy brittle star

Not only have scientists from Japan performed the first non-destructive morphological observations on the Fleshy brittle star, Asteronyx loveni, using micro X-ray tomography, but they also published their research as the first study supported via crowdfunding in the Asian country.

The team leader, Dr. Masanori Okanishi, Ibaraki University, managed to raise part of the funds via Japan’s pioneering crowd-funding platform academist. The study by Dr. Masanori Okanishi, Dr. Toshihiko Fujita, National Museum of Nature and Science, Tsukuba, Yu Maekawa and Dr. Takenori Sasaki, University of Tokyo, is now openly available in the open access journal ZooKeys.

While taxonomy is generally considered as “minor” and “basic” discipline within biology, it could be extremely strenuous for taxonomists to apply for and receive funding. Thus, Dr. Okanishi jumped to the conclusion that his planned study might have a go via crowdfunding instead.

Dr. Okanishi approached academist in April 2014, when he was a Postdoctoral researcher at Kyoto University. Titled “Taxonomy of bathyal euryalid ophiuroids”, it was not long before his research project successfully raised 634,500 JPY (ca. 5,600$).

Having already stumbled across several undescribed species of the brittle star genus Asteronyx, the scientists directed the raised funds towards the genetic and morphological analysis of Asteronyx loveni.

As suggested by its common name, the fleshy brittle star (Asteronyx loveni) is covered by thick skin, making it particularly difficult for scientists to observe the body in detail without dissolving the skin. However, modern computed tomography with micrometer resolution allowed for the 3D images of skeletal ossicles and soft tissues to be constructed with no physical intervention whatsoever.

“The present case indicates that crowdfunding will increase the chances to finance the funds for researchers in those disciplines and activate the research area,” conclude the authors.

The newly discovered brittle star species are yet to be published.

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Original source:

Okanishi M, Fujita T, Maekawa Y, Sasaki T (2017) Non-destructive morphological observations of the fleshy brittle star, Asteronyx loveni using micro-computed tomography (Echinodermata, Ophiuroidea, Euryalida). ZooKeys 663: 1-19. https://doi.org/10.3897/zookeys.663.11413

The Cerberus Groundsnake is a Critically Endangered new species from Ecuador

With as many as 140 species, Atractus is the most diverse snake genus in the world, even though it can be found exclusively in Central and South America. However, these colubrid ground snakes seem largely under-researched, since there have been thirty-three species discovered in the last ten years only.

As concluded by a team of scientists, led by Alejandro Arteaga, Tropical Herping, Ecuador, this is the result of a lack of DNA information in the original descriptions of many of these species. Consequently, there have been a lot of specimens sitting in museum collection that remain either misidentified, or anonymous.

To address the issue around the problematic identification of these snakes and their correct placement in the tree of life, the scientists have studied the hereditary molecular differences in the genus using both newly collected specimens, as well as previous publications on the species occurring in the Pacific lowlands and the adjacent Andean slopes.

Their research results in a new paper, published in the open access journal ZooKeys, which describes a total of three new species from Ecuador. The authors also propose a new species group and a redefinition of a previously established one.

Interestingly, one of the new species is to be referred to as Cerberus Groundsnake, while in the books it will appear under Atractus cerberus. It is predominantly brown in colour with faint black longitudinal bands, and measures about 21 – 31 cm in length. The biologists justify the curious name of this species with the peculiar location where they spotted the first known specimen. Found at the gates of the newly formed “Refinería del Pacífico”, a massive industrial oil-processing plant, the authors were quick to recall the multi-headed monstrous dog Cerberus, known to be guarding the gates of the underworld, according to Greek mythology.

In terms of their conservation status, the scientists have proposed the Cerberus Groundsnake to be listed as Critically Endangered, according to the IUCN criteria, since its single known habitat is highly likely to be the only one, being isolated from any other similar habitats. Moreover, it comprises a relatively small patch of land, which in turn is declining in both size and quality due to deforestation. According to the IUCN criteria, a Critically Endangered status is given to a (group of) species whenever the best available evidence indicates that it faces an extremely high risk of extinction in the wild.

The other two new species, the Indistinct (Atractus esepe) and the Pyron’s (Atractus pyroni) ground snakes are to be listed as Data Deficient as the information about them is currently insufficient for their risk of extinction to be assessed.

Having increased the number of Atractus species in Ecuador to twenty-seven, the authors expect that the count is yet to rise. “We hope that the novel genetic and morphological data provided herein will promote future researchers to examine species boundaries in Atractus, as additional work clearly is waiting,” they add.

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Original source:

Arteaga A, Mebert K, Valencia JH, Cisneros-Heredia DF, Peñafiel N, Reyes-Puig C, Vieira-Fernandes JL, Guayasamin JM (2017) Molecular phylogeny of Atractus (Serpentes, Dipsadidae), with emphasis on Ecuadorian species and the description of three new taxa. ZooKeys 661: 91-123. https://doi.org/10.3897/zookeys.661.11224

A new species of hard coral from the World Heritage-listed Lord Howe Island, Australia

The discovery of a new species of hard coral, found on Lord Howe Island, suggests that the fauna of this isolated location in the Tasman Sea off south eastern Australia is even more distinct than previously recognised.

In a recent paper in ZooKeys, Prof. Andrew Baird and Dr. Mia Hoogenboom from James Cook University, Townsville Australia and Dr. Danwei Huang from the National University of Singapore, describe the new species Cyphastrea salae.

“The animal itself is quite non-descript from a distance, although it is beautifully symmetrical up close like most corals,” says Dr. Hoogenboom. “But we believe this is the first of many new hard coral species to be found in this World Heritage-listed marine protected area.”

Lord Howe Island is famous for its many unique plant and animal species, known from nowhere else on Earth, including at least four species of palms, nine reef fish and 47 algae. However, the coral fauna remains largely unexplored, particularly using modern genetic techniques.

While some of the earliest work on coral reef ecology was done on Lord Howe Island, the species lists were compiled using a morphological taxonomy that has since been revised.

“On my very first dive in the lagoon at Lord Howe I knew I was looking at something very special,” says Prof. Baird. “Twenty years of diving all over the globe had not prepared me for what I saw. I could hardly put a name on any coral!”

Now, six years later, and largely due to the molecular skills of colleague Dr. Huang, the team is ready to name its first species.

“Interestingly, Cyphastrea salae looks almost exactly like other closely-related corals. However, its gene sequences are distinct and there is no doubt it is a species that is new to science,” says Dr. Huang.

The team now have hundreds of specimens to work through, but they are confident that there are more new coral species left to describe.

“The Acropora, in particular, look highly promisingly,” says Prof. Baird. “There are at least five species that look unlike anything I have seen anywhere else in my travels”.

Lord Howe Island lies over 900 km south of the next major area of coral diversity, the Great Barrier Reef, and therefore the populations on Lord Howe are highly isolated. Such isolation creates the potential for speciation, however, C. salae is the first new local coral species described to date. The discovery of this new species greatly increases the conservation significance of Lord Howe Island and reinforces the need for strong management measures to protect this unique fauna.

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Original source:

Baird AH, Hoogenboom MO, Huang D (2017) Cyphastrea salae, a new species of hard coral from Lord Howe Island, Australia (Scleractinia, Merulinidae). ZooKeys 662: 49-66. https://doi.org/10.3897/zookeys.662.11454

New species of terrestrial crab found climbing on trees in Hong Kong

A new species of terrestrial crab has been found to climb trees on the eastern coast of Hong Kong. All specimens spotted during the survey have been collected at a height of approximately 1.5 – 1.8 m, walking on the bark of the branches at ebbing and low tides. The species is described in the open access journal ZooKeys.

Among the crab’s characteristic traits are squarish predominantly dark brown carapace, very long legs and orange chelipeds. The species is less than a centimetre long, with the studied specimens measuring between 8 and 9 millimetres, irrespective of their sex. However, the chelipeds of the males appear stout, while in females they are distinctly more slender.

The scientists who found the new species (Haberma tingkok), Dr. Stefano Cannicci, the Swire Institute of Marine Science at the University of Hong Kong, and Dr. Peter Ng, National University of Singapore, have placed the new species in a small genus, which now contains merely three species. In fact, Dr. Peter Ng has been involved in the discovery of all of them. He also led the team that established the genus 15 years ago, having collected a small previously undescribed species of mangrove crab from Singapore.

The discovery of the tiny crustacean once again proves how little is known about the diversity of these crabs in Hong Kong. Furthermore, the mangroves that make for the habitat of the new species are under severe impact by both pollution and land reclamation, which underlines the urgent need for their conservation.

Earlier this year, Dr. Peter Ng teamed up with Dr. Jose Christopher Mendoza to describe another new species of crab, collected from the rubble at the island of Guam and named after two of the main characters in J. K. Rowling’s Harry Potter fantasy series.

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Original source:

Cannicci S, Ng PLK (2017) A new species of micro-mangrove crab of the genus Haberma Ng & Schubart, 2002 (Crustacea, Brachyura, Sesarmidae) from Hong Kong. ZooKeys 662: 67-78. https://doi.org/10.3897/zookeys.662.11908

New species of Brazilian copepod suggests ancient species diversification and distribution

A new species of groundwater copepod has been discovered in the rocky savannas of Brazil – an ecosystem suffering from heavy anthropogenic impact. Upon description, the tiny crustacean turned out to also represent a previously unknown genus. It is described by Dr. Paulo H. C. Corgosinho, Montes Claros State University, Brazil, and his team in the open access journal Zoosystematics and Evolution.

Prior to the discovery of the new species, named Eirinicaris antonioi, only one genus of its subfamily (Parastenocaridinae) had been recorded in the Neotropical region, which comes to show that related species had already spread across a huge range when the ancient supercontinent Gondwana split apart.

The new copepod measures about 0,300 mm and can be told apart by its morphological characteristics, including unusual sensorial structures at the rear part of the body, as well as unique sexual dimorphism.

The copepods of the family Parastenocarididae are adapted to life in groundwater, where they thrive between sand grains. These tiny creatures measure less than 1 mm, ranging between 0,200 and 0,400 mm in length. They can be found in various microbiotopes along rivers, lakes and human-made structures, such as dug or artesian wells. Alternatively, these copepods might be associated with mosses and other semi-terrestrial environments.

“This is the first species described from Goiás state, Central Brazil,” explain the authors. “With the discovery of this new species our knowledge about the geographical distribution of the copepod family Parastenocarididae is increased. Our project highlights the vast amounts of undiscovered biodiversity of the Brazilian rocky savannas, which are under high anthropogenic threat.”

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Original source:

Corgosinho PHC, Schizas NV, Previattelli D, Falavigna da Rocha CE, Santos-Silva EN (2017) A new genus of Parastenocarididae (Copepoda, Harpacticoida) from the Tocantins River basin (Goiás, Brazil), and a phylogenetic analysis of the Parastenocaridinae. Zoosystematics and Evolution 93(1): 167-187. https://doi.org/10.3897/zse.93.11602

With flying colors: Top entomology students honoured with wasp species named after them

The highly divergent parasitic wasps have long been causing headaches to scientists. At one point, taxonomists began using some genera as “dumping grounds for unplaced members”, simply to organise the species.

Two entomologists from the University of Kentucky, USA – Drs. Michael J. Sharkey and Eric Chapman, have recently addressed one such issue by describing ten new genera and many more new species and combinations. The resulting paper is published in the open access journal ZooKeys.

Interestingly, among the newly described species there are two wasps named after two excellent entomology students: Leuroagathis paulbakeri and Scabagathis emilynadeauae. Both Mr. Paul Baker and Ms. Emily Nadeau scored 100% during an Entomology class in 2015. Paul passed the written exam with flying colours, while Emily did best on the weekly quizzes.

One of the new genera (Chimaeragathis) is named after the Greek mythological monster Chimera. Known as the sibling of the infamous Cerberus and Hydra, the Hellenes would describe Chimera as a horrid hybrid comprising several animals – usually a lion, a goat, and a serpent. The scientists have picked this name as a reference to the multiple diagnostic characters of the genus. In turn, each of those characters consists of a set of features used to diagnose related genera.

To breed, the females of these wasps lay eggs inside the early stages of caterpillars of various moths. At first, the larva develops quietly as if unnoticed by the host. By the time the caterpillar is ready to spin a cocoon, the parasitoid ‘awakes’ and consumes the host from the inside.

The aim of the present study is to revise the representatives of a tribe of braconid parasitoid wasps inhabiting Southeast Asia with a focus on Thailand. While having described a lot of new taxa, the scientists have saved another batch of new species for a separate future paper.

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Original source:

Sharkey MJ, Chapman E (2017) Ten new genera of Agathidini (Hymenoptera, Braconidae, Agathidinae) from Southeast Asia. ZooKeys 660: 107-150. https://doi.org/10.3897/zookeys.660.12390

New frog from the Peruvian Andes is the first amphibian named after Sir David Attenborough

While there are already a number of species named after famous British broadcaster and naturalist Sir David Attenborough, including mammals, reptiles, invertebrates and plants, both extinct and extant, not until now has the host of the BBC Natural History’s Life series been honoured with an amphibian.

A new fleshbelly frog, recently discovered in the Peruvian Andes, is formally described as Pristimantis attenboroughi, while commonly it is to be referred to as the Attenborough’s Rubber Frog. The new species is published in the open-access journal ZooKeys.

Scientists Dr. Edgar Lehr, Illinois Wesleyan University, and Dr. Rudolf von May, University of Michigan, spent two years (2012-2014) surveying montane forests in central Peru, in order to document the local amphibians and reptiles, and evaluate their conservation statuses. Their efforts have been rewarded with several new species of frogs and a new spectacled lizard.

Each of these discoveries, including the Attenborough’s Rubber Frog, prove how beneficial it is to take into account both morphological and the genetic data, while looking for species new to science. For example, the authors report that when they spotted the P. attenboroughi frog for the first time, both of them were sure that they had found a species of another genus.

The Attenborough’s rubber frog is known to inhabit several localities across the Pui Pui Protected Forest, a nature reserve located at elevations between 3400 and 3936 m a.s.l. in central Peru. The adult males reach size of 14.6-19.2 mm in length, while the females are larger measuring between 19.2 and 23.0 mm. Their ground colour ranges from pale to dark gray, or reddish brown to brownish olive with dark gray scattered flecks. Meanwhile, the juveniles are paler (yellowish to reddish brown) with contrasting dark brown flecks and distinct stripes.

Due to the amphibian being known from fewer than ten localities, spread across less than 20,000 km2, the species should be deemed either Vulnerable or Endangered, according to the IUCN Red List Categories and Criteria. However, the authors suggest that the Attenborough’s Rubber frog should be listed as Near Threatened instead, since the Piu Piu forest is formally protected and still largely unknown, so it is likely that there are more additional populations of the new species. On the other hand, factors such as fungal infections, climate change, pollution, and man-made fires continue to be threats for many Andean amphibians even inside protected areas.

“We dedicate this species to Sir David Frederick Attenborough in honor for his educational documentaries on wildlife, especially on amphibians (e.g., Life in Cold Blood, Fabulous Frogs), and for raising awareness about the importance of wildlife conservation,” explain the authors.

In the present study, the scientists note that there are more terrestrial-breeding frogs from the surveyed montane forests that will be described in the near future.

Among the numerous namesakes of Sir David Attenborough to date, there are a rare genus of beautiful flowering plants, a rare butterfly species, commonly known as the Attenborough’s black-eyed satyr, a flightless weevil species, as well as a number of extinct species.

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Original source:

Lehr E, von May R (2017) A new species of terrestrial-breeding frog (Amphibia, Craugastoridae, Pristimantis) from high elevations of the Pui Pui Protected Forest in central Peru. ZooKeys 660: 17-42. https://doi.org/10.3897/zookeys.660.11394

Portuguese moth’s mystery solved after 22 years

An unknown moth, collected from Portugal 22 years ago, has finally been named and placed in the tree of life thanks to the efforts of an international team of scientists. The moth was unambiguously placed in the family of geometer moths (Geometridae), commonly known as loopers or inchworms due to the characteristic looping gait of their larvae.

The new species description is published in the open access journal Nota Lepidopterologica, along with a taxonomic review of the genus Ekboarmia, thought to comprise four species in the western Mediterranean area.

The first specimen, a male, was found in 1995 in Lagoa de Santo André, south of Lisbon, near the Atlantic coast. Despite its unique appearance, the specialists did not find enough similarities with any other European species, making its classification impossible. When three females were finally found following an intensive search in 2009, the team of scientists hoped they would find enough evidence to solve the mystery.

“The discovered females had different wing patterns compared to the males, suggesting sexual dimorphism, adding another complexity in the identification. This new species could not have been classified on the basis of external characters alone,” explains Dieter Stüning from Zoologisches Forschungsmuseum Alexander Koenig, Bonn, Germany.

In 2015, two specimens, a male and a female, have been DNA barcoded and recently became targets of detailed morphological examinations. DNA data played an essential role in demonstrating that the male and the female belong to the same species, whereas morphological structures finally provided unambiguous evidence to place the mystery moth in the geometrid genus Ekboarmia. The species name miniaria seemed appropriate to denote its small size. The tiny moth is the smallest in its genus whose other species are externally dissimilar.

Peder Skou from Denmark played a central role in the discovery of the species, tirelessly searching for more material to solve the questions. “Discovery of an undescribed and distinct macromoth from Europe is a rare occasion, because the continent’s fauna is probably the most exhaustively studied in the world,” explains Skou.

Pasi Sihvonen from the Finnish Museum of Natural History concludes: “Virtually nothing is known about the species. Altogether, only 11 specimens have been found between 1995 and 2011. Larvae of related species feed on juniper needles, which might also be the foodplant of the new species. We hope that the richly illustrated publication of the new moth will lead to new discoveries of this mysterious species. More data are needed, for instance, its conservation status cannot be evaluated due to insufficient life history and distribution data.”

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Original source:

Skou P, Stüning D, Sihvonen P (2017) Revision of the West-Mediterranean geometrid genus Ekboarmia, with description of a new species from Portugal (Lepidoptera, Geometridae, Ennominae). Nota Lepidopterologica 40(1): 39-63. https://doi.org/10.3897/nl.40.10440

Shadow-loving insect named after Tuomas Holopainen of Nightwish

Tuomas Holopainen, the multi-talented musician and founder of the symphonic metal band Nightwish, is also a full-blooded nature person. This gave conservation biologist Jukka Salmela of Metsähallitus Parks & Wildlife Finland an idea for the name of a new species he found in Finland. Discovered in eastern Lapland during an insect survey, the fungus gnat was given the scientific name Sciophila holopaineni after Tuomas. The new species is described in the open access Biodiversity Data Journal.

“I am very, very touched. This is the highest honour a nature nerd like me can receive,” Tuomas Holopainen replied after Jukka, who collected and described the fungus gnat, asked him for permission to name the species after him.

The idea for the name came up to Salmela while he was thinking about the habitat and appearance of the species. Then, he recalled Tuomas Holopainen’s interest in the natural sciences.

So far, the new species of fungus gnat has been only known from two locations: the Törmäoja Natura Area in Savukoski, eastern Lapland, and a meadow close to the White Sea, Russian Karelia.

The dark and beautiful gnat thrives in shadowy environments. In Törmäoja, it was caught in a river gulch next to the river source, while hiding under the shelter of the forest. Salmela proposes ‘tuomaanvarjokainen’ as the common Finnish name, inspired by the latest Nightwish album. After all, the themes of the album, Endless Forms Most Beautiful, are evolution and the diversity of nature.

Fungus gnats are flies, which feed on dead wood or fungi. Some of the larvae are predaceous. At current count, there are almost 800 species in Finland and about 1,000 in the Nordic countries. In fact, the Fennoscandia region is one of Europe’s biodiversity hotspots for this group of insects.

The Tuomas Holopainen’s species is only one of the eight new flies described in the study. Among them are the Boletina norokorpii fungus gnat, named after Docent Yrjö Norokorpi and known only from Ylitornio; Phronia reducta, which inhabits Salla and Siberia; and Orfelia boreoalpina found in Törmäoja and the German Alps.

The Parks & Wildlife Finland of Metsähallitus is responsible for the management and species surveys of the State’s nature reserves. The collected data is needed in activities such as assessing the status of biodiversity, the protection of species, and planning the management and use of the reserves. Insects are as good an indicator of the state of the natural environment as better-known vertebrates or plants. The diversity of insect species forms part of natural biodiversity and is necessary to human well-being.

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Original source:

Salmela J, Kolcsár L (2017) New and poorly known Palaearctic fungus gnats (Diptera, Sciaroidea). Biodiversity Data Journal 5: e11760. https://doi.org/10.3897/BDJ.5.e11760

Gehry’s Biodiversity Museum – favorite attraction for the butterflies and moths in Panama

Ahead of Gehry’s Biodiversity Museum‘s opening in October 2014, PhD candidate Patricia Esther Corro Chang, Universidad de Panama, studied the butterflies and moths which had been attracted by the bright colours of the walls and which were visiting the grounds of the tourist site.

The resulting checklist, published in the open access journal Biodiversity Data Journal, aims to both evaluate the biodiversity and encourage the preservation and development of the Amador Causeway (Calzada de Amador) and the four Causeway Islands. The name of the islands derives from their being linked to each other and the mainland via a causeway made of rocks excavated during the construction of the Panama Canal.

The researcher reports a total of six butterfly and eight moth families, identified from the 326 specimens collected over the course of 10 months from the botanical garden of the museum and adjacent areas. They represent a total of 52 genera and 60 species.

Interestingly, the eye-catching bright colours of the walls of the museum seem to play an important role for the insect fauna of the area. Not only are numerous butterflies and moths being attracted to the site, but they also express curious behaviour. On various occasions, for example, a species of skipper butterfly was seen to show a clear preference for yellowish surfaces. In their turn, a number of butterfly predators, such as jumping spiders, are also frequenting the walls.

The article in the journal provides knowledge of the butterfly and moth fauna at the mainly vegetated study area, located on a narrow strip of water distant from the city of Panama.

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Original source:

Corro-Chang P (2017) Behavioural notes and attraction on Lepidoptera around the Gehry’s Biodiversity Museum (Causeway, Calzada de Amador, Panamá, República de Panamá). Biodiversity Data Journal 5: e11410. https://doi.org/10.3897/BDJ.5.e11410