Tag: Canada

Exploring arctic plants and lichens: An important conservation baseline for Nunavut’s newest and largest territorial park

A comprehensive study of the floristic diversity of Agguttinni Territorial Park has documented 141 vascular plant, 69 bryophyte, and 93 lichen species from this unique protected area.

Encompassing over 16 000 km2 of towering mountains, long fiords, lush valleys, and massive ice caps, Agguttinni Territorial Park is a protected area on northern Baffin Island, Nunavut, Canada. This park, and all of Nunavut, is Inuit Nunangat – Inuit homeland in Canada – and the park protects sites and biodiversity stewarded by Inuit since time immemorial.

Lapland Diapensia (Diapensia lapponica). Photo credit Lynn J. Gillespie © Canadian Museum of Nature

Agguttinni means “where the prevailing wind occurs” in the Inuktitut local dialect. The park includes important bird areas, key habitats for polar bears and caribou, and numerous important Inuit cultural sites. It is very remote: no roads lead to it, and access is only by helicopter, boat in the summer, or snowmobile in the winter.

A field camp in Atagulisaktalik, Agguttinni Territorial Park. Photo credit Paul Sokoloff © Canadian Museum of Nature

During the development of the park’s management plan, a team from the Canadian Museum of Nature, led by Dr. Lynn Gillespie, inventoried the park’s plants and lichens in partnership with Nunavut Parks and Special Places, with the support of Polar Knowledge Canada.

Over five weeks in the summer of 2021, Dr. Gillespie’s team traveled across Agguttinni, exploring the vicinity of four base camps in the park on foot and further afield by helicopter. Across this large area, they studied many different habitats from the interior Barnes Ice Cap to the coast of Baffin Bay.

Stewart Valley. Photo credit Lynn J. Gillespie © Canadian Museum of Nature

The heads of the long fiords, sheltered far inland, hosted the greatest plant diversity in the park, including numerous species rare on Baffin Island and two species previously only known from farther south in Canada: Lapland Diapensia (Diapensia lapponica) and Flame-tipped Lousewort (Pedicularis flammea). Conversely, the interior plateau near the ice cap was less diverse, but still held new records for Nunavut, such as Powdered Matchstick Lichen (Pilophorus caerulus), Starke’s Fork Moss (Kiaeria starkei) and Sprig Moss (Aongstroemia longipes).

Wooly lousewort (*Pedicularis lanata*). Photo credit Lynn J. Gillespie © Canadian Museum of Nature

This intensive fieldwork resulted in over a thousand new specimens deposited at the National Herbarium of Canada at the Canadian Museum of Nature and other herbaria worldwide. These pressed and preserved plants and lichens serve as proof that these species were found at this specific place and time and are the foundation for our knowledge of botanical diversity in the park.

Dr. Gillespie and her team also examined over 300 existing herbarium specimens from the park area, most of which were collected in 1950, the last time botanists intensively studied this part of Baffin Island. Combining data from these old and new specimens has resulted in an annotated checklist of the park’s plant and lichen diversity, describing the 141 vascular plant, 69 bryophyte, and 93 lichen species documented in Agguttinni, all native to the Arctic.

This checklist, immensely valuable to park managers and botanists, is filled with descriptions and photos useful to anyone interested in Arctic botany and is out now in the open-access, peer-reviewed journal Check List. With information on which species are present, where they are distributed, and which ones are rare, it will help the conservation and management of the protected area.

Research article:

Gillespie LJ, Sokoloff PC, Levin GA, Doubt J, McMullin RT (2024) Vascular plant, bryophyte, and lichen biodiversity of Agguttinni Territorial Park, Baffin Island, Nunavut, Canada: an annotated species checklist of a new Arctic protected area. Check List 20(2): 279-443. https://doi.org/10.15560/20.2.279

Non-native pest-controlling wasp identified in Canada prior to formal approval

A samurai wasp (Trissolcus japonicus) lays an egg inside a brown marmorated stink bug (Halyomorpha halys) egg. The samurai wasp’s offspring will develop inside the pest’s egg and emerge as an adult wasp. Photo by Warren Wong.

Thought to be Canada’s most promising potential defense against the brown marmorated stink bug – a globally spreading agricultural pest native to Asia – the samurai wasp (another species from Asia and natural parasitoid of the former) has been considered for future release in the country in recent years.

However, prior to any formal decision and regulatory approval, the parasitoid, which is known to be specialized on stink bug eggs, was identified at a heavily infested site in Chilliwack, British Columbia, during a survey of the local enemies of the bug, conducted by a research team led by Dr. Paul Abram of Agriculture and Agri-Food Canada. Their findings are published in the open-access Journal of Hymenoptera Research.

Native to China, Japan, Taiwan and the Korean peninsula, the brown marmorated stink bug (Halyomorpha halys) has already established in areas of the United States and Europe and continues to spread. It is highly damaging to a wide range of vegetable and fruit crops, including peaches, apples, pears, soybeans, cherries, raspberries and pears. Curiously, those infested areas in both the USA and Europe also saw the arrival of the samurai wasp (Trissolcus japonicus) amid assessments whether releasing samurai wasps in the wild should be warranted.

“Classical (importation) biological control of invasive pests, where natural enemies are imported and intentionally introduced from a pest’s area of origin, involves years of research to assess risks and benefits of proposed introductions, followed by regulatory approval,” explain the researchers in their paper.

“However, there is increasing recognition that unintentional introductions of natural enemies are probably common, introducing a high level of uncertainty to the regulatory process for biological control introductions.”

In two consecutive years (2017 and 2018), the team of Dr Abram placed a total of 1,496 egg masses (41,351 eggs) of brown marmorated stink bugs at 16 field sites in coastal and interior British Columbia – already known to host large and well-established breeding populations of the species – in order to monitor and identify the local enemies of the pest. Later on, when the researchers retrieved the eggs and studied their parasitoids, they found three native wasp species, but their parasitism appeared largely unsuccessful.

*Female samurai wasp (Trissolcus japonicus) collected from Chilliwack, British Columbia. Photo by Elijah Talamas.*

According to the scientists, as well as previous studies conducted in both the USA and Europe, native wasps would often lay their eggs in those of the brown marmorated stink bug, but their larvae would rarely complete development. Even when they emerged, they were unlikely to produce their own offspring.

In one of the egg masses, however, the scientists noted that all eggs had been parasitized and, moreover, each produced a viable wasp. Later, the offspring would register a success of >90% in parasitizing brown marmorated stink bug eggs. Following these observations, the team identified these parasitoids as samurai wasps.

While the species is currently being redistributed within some US states on purpose, samurai wasp populations advancing to other localities suggest that much like its host, the parasitoid is also becoming a “global invader”. Therefore, it is quite possible that the samurai wasps in British Columbia have simply crossed a distance of >400 km from nearby Washington State, and the wasp is still at the early stages of its establishment in Canada.

“Nonetheless, the detection of this exotic biological control agent in Canada concurrently with regulatory review of its intentional importation and release is emblematic of the current uncertainty around regulatory control on the movement of biological control agents across borders,” comment the authors of the study.

Field surveys and extensive analyses are currently underway to track the establishment and biological control impact of the samurai wasp in Canada and also reveal how the species ended up in British Columbia.

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Original source:

Abram PK, Talamas EJ, Acheampong S, Mason PG, Gariepy TD (2019) First detection of the samurai wasp, Trissolcus japonicus (Ashmead) (Hymenoptera, Scelionidae), in Canada. Journal of Hymenoptera Research 68: 29-36. https://doi.org/10.3897/jhr.68.32203

Tiny moth from Asia spreading fast on Siberian elms in eastern North America

In 2010, moth collector James Vargo began finding numerous specimens of a hitherto unknown pygmy moth in his light traps on his property in Indiana, USA. When handed to Erik van Nieukerken, researcher at Naturalis Biodiversity Center (Leiden, the Netherlands) and specialist in pygmy moths (family Nepticulidae), the scientist failed to identify it as a previously known species.

*These are male specimens of the studied leaf mining moth Stigmella multispicata collected from Iowa, USA.*

Then, Erik found a striking similarity of the DNA barcodes with those of a larva he had recently collected on Siberian elm in Beijing’s botanical garden. At the time, the Chinese specimen could not be identified either.

In October 2015, Daniel Owen Gilrein, entomologist at Cornell Cooperative Extension of Suffolk County (New York, USA), received samples of green caterpillars seen to descend en masse from Siberian elm trees in Sagaponack, New York. He also received leafmines from the same trees.

Once they joined forces, the researchers did not take long to find out that the specimens from James Vargo and the caterpillars from New York belonged to one and the same species. The only thing left was its name.

Following further investigation, the scientists identified the moth as Stigmella multispicata – a pygmy moth described in 2014 from Primorye, Russia, by the Lithuanian specialists Agne Rociene and Jonas Stonis.

“Apparently, this meant that we were dealing with a recent invasion from East Asia into North America,” explains Erik.

Once the researchers had figured out how to identify the leafminer, they were quick to spot its existence in plenty of collections and occurrence reports from websites, such as BugGuide and iNaturalist.

With the help of Charley Eiseman, a naturalist from Massachusetts specializing in North American leafminers, the authors managed to conclude the moth’s existence in ten US states and two Canadian provinces. In most cases, the species was found on or near Siberian elm – another species transferred from Asia to North America.

Their study is published in the open access journal ZooKeys.

Despite the oldest records dating from 2010, it turned out that the species had already been well established at the time. The authors suspect that the spread has been assisted by transport of plants across nurseries.

“Even though Stigmella multispicata does not seem to be a real problem, it would be a good idea to follow its invasion over North America, and to monitor whether the species may also attack native elm species,” the researchers point out.

Interestingly, in addition to the newly identified moth, the Siberian elms in North America have been struggling with another, even more common, invasive leafminer from Asia: the weevil species Orchestes steppensis. The beetle had been previously misnamed as the European elm flea weevil.

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Original source:

van Nieukerken EJ, Gilrein DO, Eiseman CS (2018) Stigmella multispicata Rociene & Stonis, an Asian leafminer on Siberian elm, now widespread in eastern North America (Lepidoptera, Nepticulidae). ZooKeys 784: 95-125. https://doi.org/10.3897/zookeys.784.27296

Canadian scientist names a new species of cuckoo bee after Sir David Attenborough

A total of fifteen new species of bees, where one honors the English broadcaster and naturalist Sir David Attenborough, are described by Thomas Onuferko, PhD candidate at York University in Toronto, Canada. His paper is published in the open access journal ZooKeys.

The new species, called Attenborough’s epeolus (pronounced ee-pee-oh-lus), is rare and known from only nine specimens observed at two localities, in Colorado and New Mexico.

To name the other new species, the author referred to colleagues or relatives, the species’ physical appearance, their collectors, or the flowers on which the insects have been found.

Currently, not much is known about any of the newly described species, except that they belong to a specialized group of bees called cuckoo bees. Much like cuckoo birds, these bees sneakily lay their eggs in the nests of other species. When they hatch, the younglings seek out and kill the host egg or larva and then feed on the pollen stored by the female who has built the nest.

Female of the newly described cuckoo bee species, Epeolus attenboroughi . This specimen is the holotype for the species, meaning it is the one used to describe the new bee.

All new species belong to the cuckoo bee genus Epeolus, known to invade nests of polyester bees in the genus Colletes. In his publication, Thomas speculates that the name ‘epeolus’ is probably a diminutive of Epeus/Epeius, the soldier in Greek mythology said to have come up with the Trojan Horse. The sinister nature of these cleptoparasitic bees must have been compared to the Greek’s famous war strategy.

Cuckoo bees are difficult to recognize as bees because they lack the characteristic fuzzy look, which comes from the numerous long branched hairs evolved to efficiently pick up pollen. Instead, cuckoo bees rely on other bees to collect pollen for their offspring, leading to the trait being lost.

While, as a result, these species would rather be likened to wasps, their appearance is not plain at all. Cuckoo bees, including Attenborough’s epeolus, possess very short black, white, red, and yellow hairs that form beautiful patterns.

“It only seemed appropriate to name a species with such an unusual life strategy and attractive appearance after someone who has dedicated his life to illustrating the beauty and complexity of the natural world,” explains Thomas.

Including the new species, there are now 43 known Epeolus species in North America.

“It may seem surprising to some that in well-researched places like Canada and the United States there is still the potential for the discovery of new species,” says the scientist.

Male of the newly described cuckoo bee species, Epeolus attenboroughi , with its proboscis (i.e. mouthparts) extended. These are elongated in order to reach and feed on the nectar within flowers.

Since cuckoo bees are rarer than their hosts – as predators are rarer than their prey – and relatively small (5.5–10.0 mm in body length), they are likely to go undetected, which partly explains why it’s taken so long to identify these new ones.

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Original source:

Onuferko TM (2018) A revision of the cleptoparasitic bee genus Epeolus Latreille for Nearctic species, north of Mexico (Hymenoptera, Apidae). ZooKeys 755: 1–185. https://doi.org/10.3897/zookeys.755.23939.

A new hope: One of North America’s rarest bees has its known range greatly expanded

The Macropis Cuckoo Bee is one of the rarest bees in North America, partly because of its specialized ecological associations. It is a nest parasite of oil-collecting bees of the genus Macropis which, in turn, are dependent on oil-producing flowers of the genus Lysimachia.

In fact, the cuckoo bee – which much like its feather-bearing counterpart does not build a nest of its own, but lays its eggs in those of other species instead – is so rare that it was thought to have gone extinct until it was collected in Nova Scotia, Canada, in the early 2000s. As a result, the Macropis Cuckoo Bee was brought to the attention of the Committee on the Status of Endangered Wildlife in Canada (COSEWIC).

Recently, an individual reported from Alberta, Canada, brought new hope for the survival of the species. In addition to previously collected specimens from Ontario, this record greatly expands the known range of the cuckoo.

Scientists Dr Cory S Sheffield, Royal Saskatchewan Museum, Canada, who was the one to rediscover the “extinct” species in Nova Scotia, and Jennifer Heron, British Columbia Ministry of Environment & Climate Change Strategy, present their new data, and discuss the conservation status of this species in their paper, published in the open access journal Biodiversity Data Journal.

“This species has a very interesting biology,” they say, “being a nest parasite – or cuckoo – of another group of bees that in turn have very specialized dietary needs.”

The hosts, bees of the genus Macropis (which themselves are quite rare) are entirely dependent on plants of the primrose genus Lysimachia. Moreover, they only go after those Lysimachia species whose flowers produce oil droplets, which the insects collect and feed to their larvae. Thus, Macropis bees require these oil-producing flowers to exist just like Macropis cuckoo bees need their hosts and their nests. Curiously, this reliance, as suggested by previous studies on related European species, has made the female cuckoos develop the ability to find their host’s nests by the smell of the floral oils.

“This level of co-dependence between flower, bee, and cuckoo bee, makes for a very tenuous existence, especially for the cuckoo,” the authors comment. “The recent specimen from Alberta lets us know that the species is still out there, and is more widespread than we thought.”

In conclusion, the authors suggest that continuing to monitor for populations of rare bees, and documenting historic records, are crucial for conservation status assessments of at-risk species.

“Biodiversity Data Journal provides a great venue to share this type of information with our colleagues for regional, national, and international efforts for species conservation,” they note.

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Original source:

Sheffield C, Heron J (2018) A new western Canadian record of Epeoloides pilosulus (Cresson), with discussion of ecological associations, distribution and conservation status in Canada. Biodiversity Data Journal 6: e22837. https://doi.org/10.3897/BDJ.6.e22837

Foreign beetle species recorded for the first time in Canada thanks to citizen science

With social networks abound, it is no wonder that there is an online space where almost anyone can upload a photo and report a sighting of an insect. Identified or not, such public records can turn out to be especially useful — as in the case of an Old World beetle species — which appears to have recently entered Canada, and was recently discovered with the help of the BugGuide online portal and its large citizen scientist community.

Having identified the non-native rove beetle species Ocypus nitens in Ontario, Canada, based on a single specimen, author Dr Adam Brunke, affiliated with the Canadian National Collection of Insects, Arachnids and Nematodes, Ottawa, sought additional data to confirm his discovery.

Eventually, he found them in the citizen-generated North American digital insect collection BugGuide, created and curated by an online community of naturalists, insect enthusiasts and entomologists. After he verified as many as 26 digital photographs to be records of the same species, he concluded that the rove beetle has expanded its distribution to two new locations — Ontario, its first in Canada, and the state of Vermont, USA. His study is published in the open access Biodiversity Data Journal.

The species O. nitens is a fairly large rove beetle measuring between 12 and 20 mm in length and visibly distinguished by the characteristic form of the head and relatively short forewings. Furthermore, the insect is quite easy to spot because it prefers living around humans, often being spotted in woodlots and backyards.

As a result of the hundreds of years of Transatlantic trade, many species have been transported accidentally among various produce to subsequently adapt and establish on the other side of the ocean. While the rove beetle species O. nitens was first reported from the Americas in 1944, it was not until the turn of the new millennium that it escaped the small area in New England, USA, which had so far been its only habitat on the continent. Then, its distributional range began to rapidly expand. It is unlikely that the presence of this rove beetle, especially in Ontario, has long remained undetected, because of thorough and multiple sampling initiatives undertaken by professionals and students in the past.

The effect of the newly recorded species on the native rove beetles is still unknown. On the other hand, there are observations that several related beetles have experienced a drop in their populations in comparison to the records from the beginning of the century.

“Citizen-generated distributional data continues to be a valuable ally in the detection of adventive insects and the study of their distributional dynamics,” concludes the author.

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Original source:

Brunke A (2016) First detection of the adventive large rove beetle Ocypus nitens (Schrank) in Canada and an update of its Nearctic distribution using data generated by the public. Biodiversity Data Journal 4: e11012. https://doi.org/10.3897/BDJ.4.e11012

Ottawa confirmed as the biodiversity hotspot for a subfamily of wasps in North America

What usually comes to mind when speaking about biodiversity hotspots are tropical regions, pristine areas and magnificent forests. Meanwhile, it is quite rare that a city in a temperate zone is considered significant in terms of biodiversity, much less mentioned as a hotspot. Yet, the city of Ottawa together with its surroundings, despite having population surpassing 1 million people, is now confirmed to be the locality in North America with the most recorded species of braconid wasps in the subfamily Microgastrinae, a group of parasitic insects that attack caterpillars and play an important role in the natural biocontrol of agriculture and forestry pests.

A study published in ZooKeys reports 158 species within 21 different genera of Microgastrinae for Ottawa. “To put this into perspective,” says Dr. Jose Fernandez-Triana, affiliated with the Canadian National Collection of Insects and lead author of the paper, “if Ottawa (a relatively small area of less than 7,800 km2) would be considered as a country itself, its species total would rank 17th among all countries in the world.”

There are close to 200 species of microgastrine wasps known from Canada and around 350 – from North America. Thus, the fauna in Ottawa equals to three quarters of the total recorded for the entire country, and almost half of all species in the Nearctic region. In fact, the diversity in the Canadian capital represents by far the highest number of species ever recorded for a locality in North America, a consequence of the city being a transition from an eastern deciduous forest biome to a boreal biome, with small areas of unusual habitats like dunes, alvars, floodplains and bogs.

Based on the analysis of almost 2,000 specimens, collected between 1894 and 2010, and housed in the Canadian National Collection of Insects, the paper also reports two new species for North America and two additional species records for Canada and Ontario, as well as dozens of new additions to the regional fauna. Seasonal distribution showed several peaks of activity, in spring, summer, and early fall.

The study highlights the incredible diversity of parasitoid wasps and how much remains to be discovered, even in temperate areas and/or city environments. “It is possible that southern localities in North America are eventually found to be more diverse than Ottawa,” notes Dr. Fernandez-Triana. “But for that to happen one would need to find an area that has a variety of habitats and has also been thoroughly sampled over the years, with thousands of specimens available for study.”

“In the meantime,” jokes the scientist, “the citizens of the Canadian capital will have the bragging rights in North America, at least for microgastrine wasp diversity.”

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Original source:

Fernandez-Triana J, Boudreault C, Buffam J, Mclean R (2016) A biodiversity hotspot for Microgastrinae (Hymenoptera, Braconidae) in North America: annotated species checklist for Ottawa, Canada. ZooKeys 633: 1-93. https://doi.org/10.3897/zookeys.633.10480

Over 300 new beetle records for New Brunswick, Canada, in a special issue of ZooKeys

Beetles diversity in New Brunswick, Canada, has elicited the interest of biologists for over a century and continues to do so. In 1991, 1,365 species were known from New Brunswick. That number had increased to 2,703 by 2013, as a result of a series of publications in three previous special ZooKeys issues and other publications. In spite of that work, there were still gaps in the knowledge of the Coleopteran fauna.

Now, a group of insect specialists have joined forces in the name of their love for beetles, and compiled their findings from the last three years, reporting another 303 species for New Brunswick, including thirty-two species new to science. All of these records are published in a special issue, titled “The Coleoptera of New Brunswick and Canada: Providing baseline biodiversity and natural history data” of the open access journal ZooKeys.

It might have been only three years, but the authors of the present issue have expanded the beetle fauna of New Brunswick by 13%. On a longer timeline since 1991, the increase rises to an impressive 124%.

These figures come as a result of the 303 new records for New Brunswick that included 32 species, which the team have found to be new to science, 4 new North American records, 21 new Canadian records, 270 new provincial records, and 45 adventive species that have somehow arrived in the region from elsewhere. As a result, the beetle fauna of New Brunswick currently comprises 3,062 species.

“This information constitutes a baseline of biological knowledge that is critical to support other branches of science,” point out the authors.

“It is important to remind ourselves that the understanding of biological diversity is not possible without taxonomic research, which is thought by many to be the foundation of biological science,” they explain. “Data on the mega-diversity of life and knowledge on species identity and distribution require discovery, description, cataloguing, and organization in order to be made accessible to a wide audience.”

“This work would not have been possible to complete without the enthusiasm, determination, and professionalism of a small number of dedicated individuals who are acknowledged in the papers in this special issue,” the researchers conclude. “We hope that this special issue will generate a positive response and further interest in the Coleoptera fauna of New Brunswick and Canada, as many new discoveries await.”

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Original source:

Webster RP, Bouchard P, Klimaszewski J, Sweeney JD (2016) History of Coleoptera collecting in New Brunswick, Canada: advancing our knowledge of the Coleoptera fauna in the early 21st century. In: Webster RP, Bouchard P, Klimaszewski J (Eds) The Coleoptera of New Brunswick and Canada: providing baseline biodiversity and natural history data. ZooKeys 573: 1-18. doi: 10.3897/zookeys.573.8123

1,541 snout moth species and counting in the United States and Canada

The present snout moth list contains a ten-percent increase in the number of species since 1983. For the last thirty-three years snout moth specialists in the United States and Canada have been describing species new to science and recording species new to these two countries. Scientists have also published studies resulting in major changes to the classification above the species level, for example by studying snout moth “ears” (tympanal organs) and utilizing genes to study their relationships.

This check list was compiled over a three-year period by Dr. Brian Scholtens and Dr. M. Alma Solis. Brian Scholtens is a professor at the College of Charleston, South Carolina, and M. Alma Solis is a research entomologist at the Agriculture Research Service’s Systematic Entomology Laboratory, and curator of the U.S. National Pyraloidea Collection located at the Smithsonian Institution, National Museum of Natural History, Washington, D.C. Their results have been published in the open-access journal ZooKeys.

“A check list is one of the most important pieces of research, with many applications,” says Dr. Solis. “Knowing the fauna of a geographic area makes it possible to track species and, in this case, potential invasive species. The caterpillars of snout moths are economically important worldwide as pests of planted crops for food or biofuel, of forest trees, and of stored products such as wheat and nuts.”

“Many species, for example, the stored product pests, occur worldwide, but others, such as pest species of grasses including corn, can be restricted or only exist in certain geographic areas,” the scientist further explains. “It is important to be able to recognize as soon as possible that a particular species is not native to the United States or Canada.”

Scientists use Latin scientific names as “unique tags” to communicate about the morphological or molecular identity and habits of a species. One of the functions of taxonomists is to determine if a species is new or if it has already been described. Historically, confusion is created when the same species is described more than once (called a synonym) in other parts of the world.

A regional check list such as this one and a worldwide check list can work together to reinforce precision in the definition and communication about species, especially decreasing confusion about synonyms. Most worldwide check lists exist as online databases that can be updated. Dr. Solis said that they had cited new discoveries relevant to the North American snout moth fauna found in GLOBIZ, or the Global Information System on Pyraloidea, an electronic list of over 15,500 snout moth species names for which she is a collaborator.

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Original source:

Scholtens, B. & M. A. Solis. 2015. Annotated check list of the Pyraloidea (Lepidoptera) of America North of Mexico. Zookeys.535:1-1136. doi: 10.3897/zookeys.535.6086.

The four-letter code: How DNA barcoding can accelerate biodiversity inventories

With unprecedented biodiversity loss occurring, we must determine how many species we share the planet with. This can start in our backyards, but speed is critical. A new study shows how biodiversity inventories can be accelerated with DNA barcoding and rapid publishing techniques, making it possible to survey a nature reserve in just four months. The final inventory of 3,500 species was written, released and published in the Biodiversity Data Journal in under one week.

To assess how quickly and effectively DNA barcoding could aid in quantifying biodiversity on a massive scale, the Biodiversity Institute of Ontario partnered with the rare Charitable Research Reserve, a 365+ hectare land reserve located in Ontario, Canada, in an attempt to expand the reserve’s existing species inventory list. To complement this speed in surveying, the two partners also used cutting edge tools and venues for data release and publishing to rapidly disseminate the results.

Surveys of different habitats on the reserve were conducted over four months and culminated in a bioblitz, at which point delegates of the 6th International Barcode of Life Conference joined the effort. “These experts possess invaluable skills that enabled us to identify so many species,” Angela Telfer, University of Guelph, comments in hindsight. “It was a great chance to marry barcoding data with taxonomic data and further our efforts to build a DNA barcode reference library.”

The use of DNA barcoding to conduct this inventory greatly improved the speed at which the results were made available to the public. For the 3,502 specimens barcoded from the bioblitz, the data were generated at an impressive time scale – samples went through lysis, DNA extraction and PCR, sequencing and validation within 72 hours of their collection. Using the BOLD barcode reference library, taxonomy was applied and these results were uploaded to the Global Biodiversity Information Facility (GBIF) via Canadensys within 96 hours of their collection.

Even the choice of journal for publication contributed to the rapid process. The manuscript preparation and submission took considerably less time due to the online writing platform and pre-submission peer-review offered by the Biodiversity Data Journal, used for the first time in this survey. This allowed the 100+ co-authors of this study to all provide input, and reviewers were able to discuss and comment on the paper during the authoring process. All data are now publicly accessible, through the journal article and the various repositories above, and all specimens have been deposited in the Biodiversity Institute of Ontario’s natural history collection and herbarium.

Over the span of four months, the two-staged survey produced a total of 28,916 specimens barcoded or observed across 14 phyla, 29 classes, 117 orders, and 531 families of animals, plants, fungi and lichens. A total of 1,102 species were recorded for the first time for the nature reserve, expanding its existing inventory by 49%.

The results from this mass data collection uncovered abundant biodiversity in taxa that were previously understudied. For example, there were no previous records of spiders at the reserve, but the team’s efforts added an impressive 181 species to the inventory list, three of which were new to the province.

“The survey at rare Charitable Research Reserve is unique to other studies in that within four months – plus a single day of a concentrated bioblitz – more than 25,000 specimens and 3,500 species were recovered, often by non-experts,” explains Connor Warne, a co-author on the paper and specialist in ants. “This model of assessment has the potential to revolutionize the way we uncover diversity in our world. With a coordinated effort, we could implement this model in parks, conservation areas and reserves across the world and take a much needed step in filling in the blank pages of the story of life on earth.”

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Original source:

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