Tag: Pensoft

Swiss-born rebranded Alpine Entomology journal joins Pensoft’s open access portfolio

Formerly dedicated to all fields in entomology, the journal now focuses on insect research from mountainous regions from around the world

Launched about a century and a half ago, the Swiss Entomological Society‘s official journal Die Mitteilungen der Schweizerischen Entomologischen Gesellschaft (Journal of the Swiss Entomological Society) is the latest historical scientific journal to join the lines of Pensoft’s portfolio.

As a result of an unanimous vote at the Swiss Entomological Society’s general assembly in March, the journal is now rebranded as Alpine Entomology to reflect the shift in its scope and focus. Furthermore, the renowned journal is also changing its format, submission and review process, “in accordance with the standards of modern scientific publishing”, as explained in the inaugural Editorial.

The first articles of Alpine Entomology in partnership with Pensoft are already live on the journal’s new website.

“Focusing the scope will improve the quality of the journal and of the submitted papers and therefore increase the impact in the scientific community,” say Dr. Thibault Lachat, Bern University of Applied Sciences and Swiss Federal Institute for Forest, Snow and Landscape Research, and Hannes Baur, Natural History Museum of Bern, and University of Bern.

Alpine Entomology now accommodates a long list of high-tech perks and brand new looks thanks to the innovative journal publishing platform ARPHA – the Pensoft-developed innovative journal publishing platform.

Nonetheless, the journal preserves its well-respected expertise and dedication to original research on the insect fauna. Occasionally, it will be also publishing studies on other arthropods from the Alpine region or other mountainous regions all over the world.

Apart from the all-new look and feel visible at first glance, there are many technologically-advanced innovations to benefit authors, readers, reviewers and editors alike.

Thanks to the fast-track and convenient publishing provided by ARPHA, each manuscript is carried through all stages from submission and reviewing to dissemination and archiving without ever leaving the platform’s singular collaboration-friendly online environment.

Once published, all articles in Alpine Entomology are to be available in three formats (PDF, XML, HTML), enriched with a whole set of semantic enhancements, so that the articles are easy to discover, access and harvest by both humans and machines.

Amongst the first papers, there are descriptions of several new mountainous species from around the world that have remained unknown to science until very recently. Two separate papers describe two new species of long-legged flies from Turkey and Croatia, respectively; while a third one reports a new ground beetle dwelling in Bhutan’s Thrumshingla National Park.

“I’m delighted to welcome this particular new member of the Pensoft’s and ARPHA’s family,” says the publisher’s founder and CEO Prof. Lyubomir Penev. “With our own solid experience in both scholarly publishing and entomological research, I’m certain that we’ll be able to provide the right venue for a fantastic title as Alpine Entomology.

“This year sees a lot of changes for the Swiss Entomological Society‘s signature journal, which I believe are all extremely positive,” says Alpine Entomology‘s Editor-in-Chief Dr. Thibault Lachat. “By making use of the modern, technologically advanced open access publishing provided by ARPHA and Pensoft, I’m convinced that our journal will increase its visibility and gain an international reputation in the entomological community.”

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New open-access journal Metabarcoding & Metagenomics joins the lines of publisher Pensoft

The new innovative academic journal makes use of the one-of-a-kind publishing platform ARPHA and its collaborative writing tool via the ARPHA-XML workflow

A new innovative open-access academic journal Metabarcoding and Metagenomics (MBMG) is launched to welcome novel papers from both basic and applied aspects.

Focusing on genetic approaches to study biodiversity across all ecosystems, MBMG covers a considerably large scope of research including environmental, microbial and applied metabarcoding and metagenomics (especially DNA-based bioassessment and -monitoring, quarantine, nature conservation, species invasions, eDNA surveillance), as well as associated topics, such as molecular ecology, DNA-based species delimitation and identification, and other emerging related fields. Submissions of bioinformatic approaches to MBMG (algorithms, software) are also encouraged.

Featuring novel article formats and data publishing workflows, MBMG is to reflect the rapid growth in the use of metabarcoding and metagenomics in life and environmental sciences.

Issued via ARPHA – the first ever publishing platform to support manuscripts all the way from authoring to peer review to publication and dissemination, designed by the academic publisher and technology provider Pensoft, the new journal is to host a wide range of outcomes from across the research cycle, including data, models, methods, workflows, software, perspectives, opinions, implementation strategies, as well as conventional research articles.

While the above-mentioned publication types are already available in other journals published on the ARPHA platform, such as Research Ideas and Outcomes (RIO), Biodiversity Data Journal and One Ecosystem, MBMG provides five extra domain-specific article types, namely: Emerging Technique, Applied Study, DNA Barcode Release, Primer Validation and Probe Validation.

The journal’s articles are to be available in three formats (PDF, XML, HTML) and full of semantic enhancements for better human- and machine-readability and discoverability. The XML-based workflow also ensures that content and data are available for extraction, indexing and re-use immediately after publication.

With Pensoft standing for transparent, reproducible and open science, the authors at MBMG are strongly encouraged to make all data publicly available either within the publication itself, or to link to external repositories. In their turn, the peer reviewers are also suggested to provide public access to their reviews and identities.

In time for the launch, MBMG has already gathered a team of experienced and renowned scientists from across the globe together on its editorial and advisory board.

“I am pleased to introduce the Metabarcoding and Metagenomics journal to the family of Pensoft,” says Prof. Lyubomir Penev, Founder and Managing Director at Pensoft. “With its exhaustive scope and advanced services and concept, I believe it fills fantastically a niche in our strong portfolio of mostly biodiversity- and ecology-themed journals.”

“Metabarcoding and metagenomics approaches are rapidly progressing and revolutionise research and its application alike,” Chief Editor Prof. Florian Leese states. “With the MBMG journal we provide an ideal platform to respond to this rapidly growing field, nucleate the emerging knowledge and stimulate further development.”

The first batch of research papers published in MBMG are now available on their new website.

“MBMG not only complements the range of journals in the field of molecular environmental life sciences, but also stands out as a novel outlet providing several unique features designed to help researchers to prepare for, and professionally deal with, the massive “deluge” of data,” reads the Editorial.

To celebrate the launch, MBMG starts with a tempting offer to potential authors: publishing will be completely free of charge during the beginning stages of the journal.

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Journal of Orthoptera Research joins scholarly publisher Pensoft’s open access portfolio

The Orthopterists’ Society’s Journal of Orthoptera Research (JOR) joins the growing portfolio of open access titles published on the Pensoft-developed journal publishing platform ARPHA (abbreviation for Authoring, Reviewing, Publishing, Hosting and Archiving).

The first issue in collaboration with Pensoft is live on the new journal’s website as of June 2017.

While preserving its attractive and well-known style and global expertise on the order Orthoptera and other closely allied insect orders, the journal now offers increased accessibility through a modernised design, intuitive interface, and many high-tech perks for authors, readers, reviewers and editors alike.

In continuous publication since 1992, Journal of Orthoptera Research is no newcomer to the arena of entomological peer-reviewed journals. It has enjoyed an esteemed place in the canon as the only global scientific publication dedicated to publishing work on the grasshoppers, crickets and bushcrickets. Now, the move to Pensoft ushers the journal to a new digital age by providing a modernised platform for showcasing fascinating research on these most charismatic and valuable of insects.

Among the innovative advantages is fast-track and convenient publishing thanks to ARPHA. Each manuscript is carried through all stages from submission and reviewing to dissemination and archiving on a single platform to facilitate and expedite the process using the best technological capabilities. Furthermore, this results in publications available in three formats (PDF, XML, HTML) with state-of-the-art semantic enhancements, so that articles can be easily found, accessed and harvested by both humans and machines.

Among the nine articles comprising the first Journal of Orthoptera Research issue since joining Pensoft [JOR Vol. 26(1)], there is a new species of bushcricket from China that sings an unusually complex tune when courting its potential partners; a curious experiment in the colour-shifting abilities of adult grasshoppers; and a description of a unique YouTube video showing two male bushcrickets engaging in previously unreported sexual activities.

“It’s pretty exciting to welcome Journal of Orthoptera Research to Pensoft’s family,” says Pensoft’s founder and CEO Prof. Lyubomir Penev. “We first started discussions on the possible publication of the journal by Pensoft back in 2010 and have resumed them a couple of times since. I am happy to see the journal now published in the modern design and format it really deserves!”

“I’m certain that ARPHA will secure the right place for Journal of Orthoptera Research among a whole portfolio of excellent zoological journals. Our journal will definitely feel at home next to the names of Journal of Hymenoptera Research, Nota Lepidopterologica, Zoologia, ZooKeys and many others,” says Editor-in-Chief Dr. Corinna Bazelet.

The journal will continue being released biannually. Traditionally, it publishes research on the insect order Orthoptera, as well as its close allies – Blattodea, Mantodea, Phasmatodea, Grylloblattodea, Mantophasmatodea and Dermaptera. The range of biological studies of these insects includes diversity, conservation, and control and management of pest species. As for the article types accepted in the journal, in addition to original research, editors will be considering review articles, short communications, and articles focusing on policy and management of Orthoptera.

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Scopus CiteScore metrics integrated with Pensoft journals

Having long been indexed by the largest abstract and citation database of peer-reviewed literature – Scopus, Pensoft journals published on the ARPHA journal publishing platform have now accommodated its latest handy products.

Both Scopus CiteScore and CiteScoreTracker have been integrated with journals published by Pensoft on ARPHA, so that evidence of their impact can be easily provided on a monthly, as well as yearly basis. The metrics are already visible on the homepages of 15 journals published by Pensoft.

Scopus calculates its CiteScore through a simple formula based on the average citations received per document.

The yearly CiteScore is how many times papers published in the previous three years with a single journal are cited in that particular year.

Meanwhile, the CiteScoreTracker provides an estimate on a monthly basis. Since the citation count builds up every month, it is still consistent with the complete year’s score, providing helpful information for a journal’s current performance. Furthermore, it ensures that journals which have only recently been indexed by Scopus are quick to receive their own CiteScore.

To provide an impact estimate as robust and reliable as possible, Scopus CiteScore relies on both the largest database of peer-reviewed literature, and inclusiveness of all publication types. While the latter is necessary in order to acknowledge the scientific value of all academic papers that have found their place in a scholarly journal, it also significantly reduces the risk of metrics manipulation.

To further illustrate the impact of Pensoft publications, a direct citation feed has recently been integrated that shows the number of Scopus citations for a particular publication. Accessible from a tab visible in each publication is a count of scholarly articles that have cited it in Scopus, in addition to previously integrated Crossref, Google Scholar and PubMed.

“Integrating Scopus CiteScore and CiteScoreTracker with all Pensoft journals and potentially with all journals published on ARPHA is what I believe to be of great benefit to all our present and future users, readers and editorial team,” says Pensoft’s founder and CEO Prof. Lyubomir Penev. “It is a fantastic way to keep a real-time track of our progress and impact in the scientific community.”

“We are delighted that Pensoft are including CiteScore metrics on their journal pages. They join a selection of early adopting publishers that recognise the need to provide their users with a range of indicators to better measure the impact of their journals,” says Chris James, Product Manager Research Metrics at Elsevier, who is responsible for CiteScore.

All Pensoft journals now integrated with Peerage of Science

Collaboration is a major driver of scientific advancement. Pensoft recognises this and has now integrated all of its journals with Peerage of Science — a platform with a mission to foster new levels of collaboration between scientists.

This integration between two innovative platforms, striving to modernize the publishing industry, provides authors with the possibility not only to receive fast-track high-quality peer review of their manuscripts, but also to have a choice between a pool of journals, when it comes to publication.

“Pensoft is a special partner for us, because they were the first publisher to start an official collaboration with Peerage of Science years ago, when we had just launched. Also, Pensoft is in many ways a pioneering publisher seeking to make the world a better place for scientists, with initiatives like the ARPHA writing tool and the RIO Journal,” explains Janne-Tuomas Seppänen, Co-Founder and Managing Director at Peerage of Science.

“I am particularly happy that Pensoft is continuing and expanding its support for our solutions for peer review, and brings more journals to the author’s destination menu in Peerage of Science. We warmly welcome the 10 new titles and their editors, and look forward to a long and productive partnership.” he adds.

The idea behind Peerage of Science was inspired by the real-world struggles a young scientist is bound to face in the traditional peer-review system. The average peer review process takes more than 160 days and could easily conclude with the paper being rejected.

The initiative applies an out-of-the-box approach to the problem, providing a collaborative platform, where peer review takes place before the actual submission to a journal. Thus the process is significantly shortened, while at the same time it secures high quality manuscripts at the end.

Similarly, Pensoft journals provide open access, new generation publishing to scientists with an emphasis of online dissemination, data re-use and semantic linking of contents. With its latest projects — RIO Journal and the ARPHA writing tool — the publisher has introduced a new generation of pre-submission and post publication peer review possibilities.

Additional benefit for the reviewers is that their reviews will be registered at Publons automatically by Pensoft, if the manuscript is published in a Pensoft journal. Reviewers will be asked for approval of the review registration before it appears in their Publons profiles.

“This collaboration works well both for us and for Peerage of Science, but most of all, it empowers the authors to set the deadlines for peer review and choose between publication offers. From the very inception of Pensoft we have striven to provide a fast, reliable and innovative service to our authors, and this new move is yet another building block in this vision.” comments Prof. Lyubomir Penev, Founder and Managing Director at Pensoft.

All Pensoft journals integrated with Publons to recognize your contribution as a reviewer

With both Pensoft and Publons aiming to facilitate scientific research and its introduction to the wide world, it only makes sense for the two to join efforts in a campaign to speed up publications, while giving the rightful credit to reviewers. From now on, anyone who makes this contribution to any of the 15 Pensoft journals will be able to opt-in to get credit for their peer reviews on Publons.

As for the moment, there are already 32 Pensoft reviewers who have added a total of 58 reviews to their Publons personal accounts and already started to receive recognition for their peer input – a kind of contribution that traditionally tends to be largely overlooked in academia. However, you can get a head start by signing-up to Publons and joining the 50,000 peer reviewers that are getting credit for their peer reviews.

Moreover, it is just as incredibly easy to add records of your Pensoft peer reviews to Publons thanks to the presently announced integration. It is while you are compiling your peer review for either Biodiversity Data Journal, BioRisk, Deutsche Entomologische Zeitschrift, Journal of Comparative Cytogenetics, Journal of Hymenoptera Research, MycoKeys, Nature Conservation, NeoBiota, Nota Lepidopterologica, One Ecosystem, PhytoKeys, Research Ideas and Outcomes (RIO), Subterranean Biology, ZooKeys or Zoosystematics and Evolution journal, that you are asked whether you want to opt-in for the service. Then, once you have completed it, you are sent an email with a link to claim your review. To protect your anonymity, it is only the journal’s name and the year of the review that will be visible on your Publons profile.

The only exception to this rule is Pensoft’s next generation Research Ideas and Outcomes (RIO) journal, where the policy of ultimate transparency and openness requires all peer reviews and their authors to be made public. It is also the only Pensoft journal whose article titles will be available on a Publons profile by default. Another distinctive feature of RIO’s – an assigned DOI for each peer review, is also supported in Publons to ensure reviewers get the most out of their contribution.

“Pensoft has a strong history of innovation and we’re excited to be working together to reward the efforts of peer reviewers,” comments the new partnership Publons co-founder Andrew Preston. “It’s also great to see that many Pensoft editors are already Publons users.”

“Crediting reviewers’ voluntary contributions to the quality of scientific publications has always been a problem, especially with the current tremendous increase in the volume of published research outputs. We are happy that Publons has found such a solution and that we can credit our reviewers through recording their activity in an entirely automated way,” added founder and CEO of Pensoft Prof. Lyubomir Penev.

Introducing the ARPHA Writing Tool

The former Pensoft Writing Tool (PWT) appears under a new name with exciting functionalities customized to your needs

It’s been almost two full years since we first launched the Pensoft Writing Tool (PWT) as the first ever workflow that supports the full life cycle of a manuscript, from authoring, to peer-review, publishing and dissemination. Now it is time to move a step forward with an updated tool that incorporates all our accumulated experience and your invaluable feedback. PWT is now transforming into ARPHA Writing Tool (AWT) – a rebrand that means much more than a change of name and design.

So, what is so cool about the new ARPHA Writing tool? Here it is:

New modern outlook and user-friendly design
All editing happens in the manuscript preview mode
Plug-in for mathematical formulas
Pre-submission technical validation, by automated tool and humans
Pre-submission external peer-review
Importing manuscripts through Application Programming Interface (API)

Those of you who have been using the PWT remember the two writing modes – Preview and Editing. Over the past two years, we’ve learned that this might sometimes be tricky. With the AWT, there will be no more flipping between modes. The tool now contains only one editing mode – this means rich editing functions and direct visualisation of your changes and comments straight into the the article preview.

Besides, the AWT will take a step beyond biodiversity data publishing towards providing a large set of predefined, yet flexible article templates to allow the publication of most types of research outcomes. As the scope is broadening, we also strive to simplify and improve the user experience.

The AWT is all about user-friendliness. With the new intuitive design and more comprehensible functions, the system is fast to navigate and get used to. While making every effort to improve user experience, we made sure functions are straightforward and easy to discover.

The AWT makes collaborative work on a manuscript with co-authors or peers easier than ever. Mentors, pre-submission reviewers, linguistic or copy editors can now contribute to the manuscript side by side. The collaborative peer-review process provides easy communication thanks to a track-change function, comments and replies, as well as automated, but customisable email and social network notification tools.

The tool also provides authors with a two-step technical validation – the manuscript is examined for consistency automatically by the system, followed by a second check from our staff ahead of publication. After an article is published, the AWT also offers easy republication of updated article versions via the authoring tool.

Perhaps the most innovative feature of AWT, however, is the new functionality to invite reviewers still during the authoring process. This function is still globally unique as it allows the authors to discuss manuscripts with their peers before submission, and consequently to submit the reviews together with the manuscript. In case the editor approves the manuscript for publication based on the pre-submission review(s), the manuscript can be published just a few days after submission.

Go to the AWT now and test it yourself: http://pwt.pensoft.net/