Tag: biodiversity

Tiny fly from Los Angeles has a taste for crushed invasive snails

Living individual of Draparnaud’s glass snail
Photo by Kat Halsey

As part of their project BioSCAN – devoted to the exploration of the unknown insect diversity in and around the city of Los Angeles – the scientists at the Natural History Museum of Los Angeles County (USA) have already discovered numerous insects that are new to science, but they are still only guessing about the lifestyles of these species.

“Imagine trying to find a given 2 mm long fly in the environment and tracking its behavior: it is the smallest imaginable needle in the largest haystack. So when researchers discover new life histories, it is something worth celebrating,”

explains Dr. Brian Brown, lead author of a recent paper, published in the scholarly open-access Biodiversity Data Journal.

However, Brown and Maria Wong, former BioSCAN technician, while doing field work at the L.A. County Arboretum, were quick to reveal a curious peculiarity about one particular species discovered as part of the project a few years ago. They successfully lured female phorid flies by means of crushing tiny, invasive snails and using them as bait. In comparison, the majority of phorid flies, whose lifestyles have been observed, are parasitoids of social insects like ants.

Within mere seconds after the team crushed tiny invasive snails (Oxychilus draparnaudi), females representing the fly species Megaselia steptoeae arrived at the scene and busied themselves feeding. Brown and Wong then collected some and brought them home alive along with some dead snails. One of the flies even laid eggs. After hatching, the larvae were observed feeding upon the rotting snails and soon they developed to the pupal stage. However, none was reared to adulthood.

Female phorid fly feeding on a crushed Draparnaud’s glass snail
Photo by Kat Halsey

Interestingly, the host species – used by the fly to both feed on and lay eggs inside – commonly known as Draparnaud’s glass snail, is a European species that has been introduced into many parts of the world. Meanwhile, the studied fly is native to L.A. So far, it is unknown when and how the mollusc appeared on the menu of the insect.

To make things even more curious, species of other snail genera failed to attract the flies, which hints at a peculiar interaction worth of further study, point out the scientists behind the study, Brown and Jann Vendetti, curator of the NHM Malacology collection. They also hope to lure in other species of flies by crushing other species of snails.

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In recent years, the BioSCAN project led to other curious discoveries from L.A., also published in Biodiversity Data Journal. In 2016, a whole batch of twelve previously unknown scuttle fly species was described from the heart of the city. A year later, another mysterious phorid fly was caught ovipositing in mushroom caps after Bed & Breakfast owners called in entomologists to report on what they had been observing in their yard.

Original source:

Brown BV, Vendetti JE (2020) Megaselia steptoeae (Diptera: Phoridae): specialists on smashed snails. Biodiversity Data Journal 8: e50943. https://doi.org/10.3897/BDJ.8.e50943

Research on bats and pangolins – potential vectors of zoonotic pandemics like COVID-19 – invited to a free-to-publish special issue in ZooKeys

Captively bred pangolins. 
Photo by Hua L. et al., taken from their study on the current status, problems and future prospects of captive breeding of pangolins, openly accessible in ZooKeys at: https://doi.org/10.3897/zookeys.507.6970

Accepted papers will be published free of charge in recognition of the emergency of the current global situation

Was it the horseshoe bat or could it rather be one of the most traded mammal in the world: the pangolin, at the root of the current devastating pandemic that followed the transmission of the zoonotic SARS-CoV-2 virus to a human host, arguably after infected animal products reached poorly regulated wet markets in Wuhan, China, last year? 

To make matters worse, the current situation is no precedent. Looking at the not so distant past, we notice that humanity has been repeatedly falling victim to viral deadly outbreaks, including Zika, Ebola, the Swine flu, the Spanish flu and the Plague, where all are linked to an animal host that at one point, under specific circumstances transferred the virus to people. 

Either way, here’s a lesson humanity gets to learn once again: getting too close to wildlife is capable of opening the gates to global disasters with horrific and irreversible damage on human lives, economics and ecosystems. What is left for us to understand is how exactly these transmission pathways look like and what are the factors making certain organisms like the bat and the pangolin particularly efficient vectors of diseases such as COVID-19 (Coronavirus). This crucial knowledge could’ve been easier for us to grasp had we only obtained the needed details about those species on time.

Aligning with the efforts of the biodiversity community, such as the recently announced DiSSCo and CETAF COVID-19 Task Force, who intend to create an efficient network of taxonomists, collection curators and other experts from around the globe and equip them with the tools and large datasets needed to combat the unceasing pandemic, the open-access peer-reviewed scholarly journal ZooKeys invites researchers from across the globe to submit their work on the biology of bats and pangolins to a free-to-publish special issue. 

The effort will be coordinated with the literature digitisation provider Plazi, who will extract and liberate data on potential hosts from various journals and publishers. In this way, these otherwise hardly accessible data will be re-used to support researchers in generation of new hypotheses and knowledge on this urgent topic.

By providing further knowledge on these sources and vectors of zoonotic diseases, this collection of publications could contribute with priceless insights to make the world better prepared for epidemics like the Coronavirus and even prevent such from happening in the future. 

Furthermore, by means of its technologically advanced infrastructure and services, including expedite peer review and publication processes, in addition to a long list of indexers and databases where publications are registered, ZooKeys will ensure the rapid publication of those crucial findings, and will also take care that once they get online, they will immediately become easy to discover, cite and built on by any researcher, anywhere in the world. 

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The upcoming “Biology of bats and pangolins” special issue is to add up to some excellent examples of previous research on the systematics, biology and distribution of pangolins and bats published in ZooKeys. 

In their review paper from 2015, Chinese scientists looked into the issues and prospects around captive breeding of pangolins. A year later, their colleagues at South China Normal University provided further insights into captive breeding, in addition to new data on the reproductive parameters of Chinese pangolins.

Back in 2013, a Micronesian-US research studied the taxonomy, distribution and natural history of flying fox bats inhabiting the Caroline Islands (Micronesia). A 2018 joint study on bat diversity in Sri Lanka focused on chiropteran conservation and management; while a more recent article on the cryptic diversity and range extension of the big-eyed bats in the genus Chiroderma. 

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For more information, visit ZooKeys website. 

Follow ZooKeys on Twitter and Facebook.

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References:

Buden D, Helgen K, Wiles G (2013) Taxonomy, distribution, and natural history of flying foxes (Chiroptera, Pteropodidae) in the Mortlock Islands and Chuuk State, Caroline Islands. ZooKeys 345: 97-135. https://doi.org/10.3897/zookeys.345.5840

Edirisinghe G, Surasinghe T, Gabadage D, Botejue M, Perera K, Madawala M, Weerakoon D, Karunarathna S (2018) Chiropteran diversity in the peripheral areas of the Maduru-Oya National Park in Sri Lanka: insights for conservation and management. ZooKeys 784: 139-162. https://doi.org/10.3897/zookeys.784.25562

Hua L, Gong S, Wang F, Li W, Ge Y, Li X, Hou F (2015) Captive breeding of pangolins: current status, problems and future prospects. ZooKeys 507: 99-114. https://doi.org/10.3897/zookeys.507.6970

Lim BK, Loureiro LO, Garbino GST (2020) Cryptic diversity and range extension in the big-eyed bat genus Chiroderma (Chiroptera, Phyllostomidae). ZooKeys 918: 41-63. https://doi.org/10.3897/zookeys.918.48786

Zhang F, Wu S, Zou C, Wang Q, Li S, Sun R (2016) A note on captive breeding and reproductive parameters of the Chinese pangolin, Manis pentadactyla Linnaeus, 1758. ZooKeys 618: 129-144. https://doi.org/10.3897/zookeys.618.8886

All microgastrinae wasps from around the world finally together in a 1,089-page monograph

With 3,000 known species and thousands more left to describe, the wasps of the subfamily Microgastrinae are the single most important group of parasitoids attacking the larvae of butterflies and moths, many of which are economically important pests. Consequently, these wasps have a significant impact on both the world’s economy and biodiversity.

Due to their affinities, these wasps are widely used in biological control programs to manage agricultural and forestry pests around the globe. Further, they have also been prominently featured in many basic and applied scientific research (e.g. chemical ecology, biodiversity studies, conservation biology, genomics, behavioural ecology). However, the information about Microgastrinae species is scattered across hundreds of papers, some of which are difficult to find. To make matters worse, there has never been an authoritative checklist of the group at a planetary scale.

All currently available information about the group is now brought together in a large monograph of 1,089 pages, published in the open-access, peer-reviewed journal ZooKeys. The publication presents a total of 2,999 valid extant species belonging to 82 genera. On top of that, the monograph features fossil species and genera, unavailable names and the institutions that store the primary types of all listed species.

Moreover, the researchers have included extensive colour illustrations of all genera and many species (thousands of images in 250 image plates); brief characterisation and diagnosis of all genera; detailed species distributions (within biogeographical regions and per individual country); synopsis of what is known on host-parasitoid associations; summary of available DNA barcodes; estimations of the group diversity at world and regional levels; as well as notes on individual species upon request.

“Compiling this annotated checklist was, more than anything, a labour of love,”

says Dr. Jose Fernandez-Triana of the Canadian National Collection of Insects, lead author of the paper.

Monograph paper openly published in ZooKeys at
https://doi.org/10.3897/zookeys.920.39128

“For the past six or seven years, we have spent thousands of hours pouring through hundreds of publications, reading original descriptions in old manuscripts, checking type specimens in many collections worldwide, exchanging information with colleagues from all continents. For the past year or so, I basically stopped all other ongoing research projects I was involved with, to focus solely (almost obsessively!) on finishing this manuscript. The work was often tedious and mind-numbing, and many times I had the temptation to delay the completion of the paper for a later time. However, I was lucky that the other co-authors were just as passionate as myself, and we all pushed each other to finish the task when energy ran low.”

Fifteen species of microgastrinae wasps showing the incredible diversity within the subfamily. Note the variety of colours and shapes.
Image by Dr. Jose Fernandez-Triana

“For the past few years, the Microgastrinae wasps have been one of the most intensively studied groups of insects, at least from a taxonomic perspective,” he adds. “Just to give you an idea: between 2014 and 2019 a total of 720 new species of Microgastrinae were described worldwide. That is an average of one new species every three days, sustained over a six-year period and showing no signs of slowing down.”

He also points out that many scientists from many different countries and biogeographical regions have been involved in the description of the new species. The paper recognises them all and their contributions in the Acknowledgements section.

“You could even say that we are witnessing a renaissance in the study of this group of wasps. However, even then, what has been done is only the tip of the iceberg, as we estimated that only 5 to 10% of all Microgastrinae species have been described. That means that we do not have a name, let alone detailed knowledge, for 90-95% of the remaining species out there. Perhaps, there could be up to 50,000 Microgastrinae wasp species worldwide. It is truly humbling when you consider the magnitude of the work that lies ahead.”

Yet, it is not only a matter of counting huge numbers of species. More importantly, many of those species either have already been put in use as biocontrol agents against a wide range of agricultural and forestry pests, or have the potential to be in the future.

For applied scientists, working with hyperdiverse and poorly known groups such as Microgastrinae is even more perplexing. Navigating the maze of old names, synonyms (species described more than one time under different names), homonyms (same names applied to different species), or unavailable names (names that do not conform to the rules of the International Commission of Zoological Nomenclature) is a daunting task. Often, that results in the same species being referred to in several different ways by different authors and academic works. Consequently, many historical references are full of misleading or even plainly wrong information. Meanwhile, it is very difficult to seek out the useful and correct information.

The present annotated checklist could work as a basic reference for anyone working with or interested in the parasitoid wasps of the subfamily Microgastrinae. In the future, the authors hope to produce revised editions, thus continuing to incorporate new information as it is generated, and to also correct possible mistakes.

“We welcome all kinds of criticisms and suggestions. And we hope that biocontrol practitioners will also help us, the taxonomists, to improve future versions of this work. However, for the time being, let me say that it is a tremendous relief to get this first version out!”

concludes Dr. Fernandez-Triana.

***

Original source:

Fernandez-Triana J, Shaw MR, Boudreault C, Beaudin M, Broad GR (2020) Annotated and illustrated world checklist of Microgastrinae parasitoid wasps (Hymenoptera, Braconidae). ZooKeys 920: 1-1089. https://doi.org/10.3897/zookeys.920.39128.

Vibes before it bites: 10 types of defensive behaviour for the False Coral Snake

The False Coral Snake (Oxyrhopus rhombifer) may be capable of recognising various threat levels and demonstrates ten different defensive behaviours, seven of which are registered for the first time for the species. Scientists from the Federal University of Viçosa (Brazil) published their laboratory observation results based on a juvenile specimen in the open-access journal Neotropical Biology and Conservation.

In a recent paper in the open-access journal Neotropical Biology and Conservation, a group of Brazilian scientists from the Federal University of Viçosa (Brazil) published ten different defensive behaviours for the False Coral Snake (Oxyrhopus rhombifer), seven of which are registered for the first time for the species. One of these is reported for the first time for Brazilian snakes.

Evolution shaped anti-predator mechanisms in preys, which can be displayed either with avoidance or defensive behaviours. The current knowledge about such mechanisms are still scarce for many snake species, but it is constantly increasing over the last years. These data are helpful for better understanding of the species ecology, biology and evolution.

The False Coral Snake (O. rhombifer) is a terrestrial snake species with a colouration like the true coral snake . The species has a wide geographic distribution, occurring in Argentina, Paraguay, Uruguay, Bolivia and all Brazilian biomes. Among its previously known anti-predator mechanisms, this species has already shown cloacal discharge, body flattening, struggling, erratic movements and hiding the head.

However, these behaviors were only a small part of what this species is capable of doing to defend itself! In November 2017, a juvenile male  captured in the Atlantic Forest of southeastern Brazil was observed under laboratory settings, where the scientists would simulate a predation attempt with an increasing threat level.

We released the snake on to the laboratory bench and let it notice our presence. The animal remained motionless at first, then performed a pronounced dorsoventral flattening of the anterior part of the body, raised its tail, adopted an S-shaped posture, raised the first third of the body and performed brief body vibrations. Then we approached the snake, which remained with the same posture and body vibrations. When we touched the animal (not handling), it remained with the S-shaped posture, keeping the first third of the body elevated and the dorsoventral flattening (however, less accentuated) and started to display erratic movements, false strikes and locomotor escape. When handled, the snake only struggled,

shares the lead scientist Mr. Clodoaldo Lopes de Assis.

Amongst ten recorded behaviour types only three were among those already registered for this species. Since defensive responses in snakes decrease as body size increases, juveniles exhibit a broader set of defensive behaviour than adults. Because of that, some types of behaviour described in this study might be explained either by physical constraints or stage of development of the individual.

Some types of behaviour resemble the ones of true coral snakes of the genus Micrurus, a group of extremely venomous snakes. Thus, this similarity may be linked with the mimicry hypothesis between these two groups, where harmless false coral snakes take advantage of their similar appearance to the true coral snakes to defend themselves.

Another type of anti-predation mechanism shown — body vibrations — is yet an unknown behaviour for Brazilian snakes and has been recorded for the first time. This type of behaviour is difficult to interpret, but could represent a defensive signal against non-visually orientated predators.

Finally, defensive strategies of the specimen differed according to the threat level imposed: starting from discouraging behaviour up to false bites, erratic movements and locomotor escape.


Some defensive types of behaviour displayed by the juvenile Oxyrhopus rhombifer
Credit: Mr. Clodoaldo Lopes de Assis
License: CC-BY 4.0

O. rhombifer may be capable of recognising different threat levels imposed by predators and adjusting its defensive behaviour accordingly,

highlights Mr. Clodoaldo Lopes de Assis.

Through such simple laboratory observations we can get a sense of how Brazilian snakes are yet poorly known regarding their natural history, where even common species like the false coral snake O. rhombifer can surprise us!

Mr. Clodoaldo Lopes de Assis adds in conclusion.

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Original source:
Lopes de Assis C, José Magalhães Guedes J, Miriam Gomes de Jesus L, Neves Feio R (2020) New defensive behaviour of the false coral snake Oxyrhopus rhombifer Duméril, Bibron & Duméril, 1854 (Serpentes, Dipsadidae) in south-eastern Brazil. Neotropical Biology and Conservation 15(1): 71-76. https://doi.org/10.3897/neotropical.15.e48564

Taxonomist Day at Pensoft: Three species in the WoRMS’ Top 10 Marine Species of 2019 described in our journals

Happy Taxonomist Appreciation Day, everyone!

In a lovely tradition, the World Register of Marine Species (WoRMS) issued the Top 10 Marine Species of 2019 for the ninth time around on time for this special day! 

In what has also already become a tradition we are particularly proud of, it’s not one, but several species described as new to science in Pensoft journals that make it to the renowned list! Even if it’s a slight step back from last year’s five entries, this year, we see a total of three species making it to the list: the Vibranium Fairy Wrasse (Cirrhilabrus wakanda) and the Green Rat Clingfish (Barryichthys algicola), both published in ZooKeys, and Thiel’s Boring Amphipod (Bircenna thieli) first known from the pages of Evolutionary Systematics.

Struggling to put a face to the name? Let us bring the stories behind these fantastic discoveries for you: 


The real-life fairy wrasse, whose scales shine bright like sci-fi vibranium

Even if the “twilight zone” – the ocean depths from 60 to 150 meters underneath the water surface, are long known to be teeming with all sorts of fascinating reef-dwelling lifeforms that still await discovery, California Academy of Sciences’ (CAS) initiative Hope for Reefs and partners are already concerned with the protection of these fragile habitats. One of the ways they do this is by deploying the taxonomic approach: recording and defining every creature the current environmental crisis could be putting in danger.

One of the latest discoveries made by the CAS team and Yi-Kai Tea, lead author and PhD student at the University of Sydney, is a stunning wrasse species with colours so mesmerising and vibrant that immediately triggered the creativity of the scientists. Discovered amongst the dusky coral reefs of eastern Zanzibar, off the coast of Tanzania, the species received the scientific name Cirrhilabrus wakanda in a nod to the Marvel Entertainment comics and movie Black Panther, where Wakanda is a mythical nation. 

The fish also goes under its common name: Vibranium Fairy Wrasse, because of its hypnotising scales reminiscent of the fictional metal. In the franchise, the vibranium is a rare, robust and versatile ore capable of manipulating energy. In its turn, the scales of the Vibranium Fairy Wrasse have a pigment so strong, their shades survive even when preserved.

“When we thought about the secretive and isolated nature of these unexplored African reefs, we knew we had to name this new species after Wakanda,”

said Yi-Kai Tea.

Story via Forbes*

Find more in the WoRMS’ press release.

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Research article in ZooKeys:

Conway KW, Moore GI, Summers AP (2019) A new genus and two new species of miniature clingfishes from temperate southern Australia (Teleostei, Gobiesocidae). ZooKeys 864: 35-65. https://doi.org/10.3897/zookeys.864.34521


The clingy, yet long unknown green fish

You might think that a common name for a genus of tiny, less than 21 mm long marine inhabitants, such as ‘Rat Clingfish’ is way too unusual already, but it’s getting even more curious when you find out about those species’ mind-boggling lifestyle. 

These two miniature clingfishes were first spotted around microalgae in Australia back in the 1980s and since then they would puzzle scientists so much they would simply refer to them as “Genus B”. However, this was about to change, when in 2019, the US-Australian research team of Drs Kevin W. Conway, Glenn I. Moore and Adam P. Summers collected and studied enough specimens found in dense stands of macroalgae in intertidal and shallow subtidal areas along the coast of southern Australia. There, the two clingfishes use their well-developed adhesive discs located on their tummies to attach to the microalgae. Because of their miniature size, they have evolved multiple reduced and novel distinctive features.

As a result of their study, we now have the genus Barryichthys, whose common name is Rat Clingfish, and two new to science species assigned to it: the Brown Rat Clingfish (Barryichthys hutchinsi) and the Green Rat Clingfish (Barryichthys algicola), where the latter was found to be particularly intriguing thanks to its peculiar green colouration and a species name translated to “one who inhabits the algae”.

Find more in the WoRMS’ press release.

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Research article in ZooKeys:

Conway KW, Moore GI, Summers AP (2019) A new genus and two new species of miniature clingfishes from temperate southern Australia (Teleostei, Gobiesocidae). ZooKeys 864: 35-65. https://doi.org/10.3897/zookeys.864.34521 


The boring vegetarian amphipod  

Another impressive creature with a taste for algae described in 2019 from Australia is the Thiel’s Boring Amphipod, which is indeed boring. The tiny crustacean, which can be found in colonies of hundreds in Tasmania, eats its way through its favourite bull kelp leaving behind tunnels.

Another peculiarity about the species is its head, which when seen from the front resembles that of an ant!

With its species name: Bircenna thieli, the scientists behind the study – Drs Elizabeth Hughes (Natural History Museum of London, UK) and Anne-Nina Lörz (University of Hamburg, Germany) pay tribute to respected crustacean expert Prof. Dr. Martin Thiel, who had originally collected some of the studied specimens.

Find more in the WoRMS’ press release.

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Research article in Evolutionary Systematics:

Hughes LE, Lörz A-N (2019) Boring Amphipods from Tasmania, Australia (Eophliantidae: Amphipoda: Crustacea). Evolutionary Systematics 3(1): 41-52. https://doi.org/10.3897/evolsyst.3.35340

Call for data papers from European Russia

Partners GBIF, FinBIF and Pensoft to support publication of data papers that describe datasets from Russia west of the Ural Mountains

Original post via GBIF

GBIF—the Global Biodiversity Information Facility—in collaboration with the Finnish Biodiversity Information Facility (FinBIF) and Pensoft Publishers, are happy to issue a call for authors to submit and publish data papers on European Russia (west of the Urals) in an upcoming special issue of Biodiversity Data Journal (BDJ).

Between now and 31 August 2020, the article processing fee (normally €450) will be waived for the first 20 papers, provided that the publications are accepted and meet the following criteria that the data paper describes a dataset:

The manuscript must be prepared in English and is submitted in accordance with BDJ’s instructions to authors by 31 August 2020. Late submissions will not be eligible for APC waivers.

Sponsorship is limited to the first 20 accepted submissions meeting these criteria on a first-come, first-served basis. The call for submissions can therefore close prior to the stated deadline of 31 August. Authors may contribute to more than one manuscript, but artificial division of the logically uniform data and data stories, or “salami publishing”, is not allowed.

BDJ will publish a special issue including the selected papers by the end of 2020. The journal is indexed by Web of Science (Impact Factor 1.029), Scopus (CiteScore: 1.24) and listed in РИНЦ / eLibrary.ru

For non-native speakers, please ensure that your English is checked either by native speakers or by professional English-language editors prior to submission. You may credit these individuals as a “Contributor” through the AWT interface. Contributors are not listed as co-authors but can help you improve your manuscripts.

In addition to the BDJ instruction to authors, it is required that datasets referenced from the data paper a) cite the dataset’s DOI and b) appear in the paper’s list of references.

Authors should explore the GBIF.org section on data papers and Strategies and guidelines for scholarly publishing of biodiversity data. Manuscripts and datasets will go through a standard peer-review process.

To see an example, view this dataset on GBIF.org and the corresponding data paper published by BDJ.

Questions may be directed either to Dmitry Schigel, GBIF scientific officer, or Yasen Mutafchiev, managing editor of Biodiversity Data Journal.

Definition of terms

Datasets with more than 5,000 records that are new to GBIF.org

Datasets should contain at a minimum 5,000 new records that are new to GBIF.org. While the focus is on additional records for the region, records already published in GBIF may meet the criteria of ‘new’ if they are substantially improved, particularly through the addition of georeferenced locations.

Justification for publishing datasets with fewer records (e.g. sampling-event datasets, sequence-based data, checklists with endemics etc.) will be considered on a case-by-case basis.

Datasets with high-quality data and metadata

Authors should start by publishing a dataset comprised of data and metadata that meets GBIF’s stated data quality requirement. This effort will involve work on an installation of the GBIF Integrated Publishing Toolkit.

Only when the dataset is prepared should authors then turn to working on the manuscript text. The extended metadata you enter in the IPT while describing your dataset can be converted into manuscript with a single-click of a button in the ARPHA Writing Tool (see also Creation and Publication of Data Papers from Ecological Metadata Language (EML) Metadata. Authors can then complete, edit and submit manuscripts to BDJ for review.

Datasets with geographic coverage in European Russia west of the Ural mountains

In correspondence with the funding priorities of this programme, at least 80% of the records in a dataset should have coordinates that fall within the priority area of European Russia west of the Ural mountains. However, authors of the paper may be affiliated with institutions anywhere in the world.

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Data audit at Pensoft’s biodiversity journals

Data papers submitted to Biodiversity Data Journal, as well as all relevant biodiversity-themed journals in Pensoft’s portfolio, undergo a mandatory data auditing workflow before being passed down to a subject editor.

Learn more about the workflow here:
https://www.eurekalert.org/pub_releases/2019-10/pp-aif101819.php.

Check out the case study below to see how the data audit workflow works in practice.

CASE STUDY: Data audit for the “Vascular plants dataset of the COFC herbarium (University of Cordoba, Spain)”, a data paper in PhytoKeys

Citizen scientists discover a new snail and name it after Greta Thunberg

A new to science species of land snail was discovered by a group of citizen scientists working together with scientists from Taxon Expeditions, a company that organises scientific field trips for teams consisting of both scientists and laypeople. Having conducted a vote on how to name the species, the expedition participants and the local staff of the National Park together decided to name the mollusc Craspedotropis gretathunbergae. The species name honors the young Swedish activist Greta Thunberg for her efforts to raise awareness about climate change. The study is published in the open-access journal Biodiversity Data Journal.

“The newly described snail belongs to the so-called caenogastropods, a group of land snails known to be sensitive to drought, temperature extremes and forest degradation”,

says snail expert and co-founder of Taxon Expeditions, Dr. Menno Schilthuizen.

All individuals were found very close to the research field station (Kuala Belalong Field Studies Centre) at the foot of a steep hill-slope, next to a river bank, while foraging at night on the green leaves of understorey plants.

Citizen scientist J.P. Lim, who found the first specimen of Greta Thunberg’s snail says:

“Naming this snail after Greta Thunberg is our way of acknowledging that her generation will be responsible for fixing problems that they did not create. And it’s a promise that people from all generations will join her to help”.


Taxon Expeditions participant J.P. Lim collecting snails.
Credit: Taxon Expeditions – Pierre Escoubas
License: CC-BY 4.0

The expedition team approached Ms. Thunberg who said that she would be “delighted” to have this species named after her. 

Video about Taxon Expeditions & Greta Thunberg snail
Credit: Taxon Expeditions

However, this is not the first time that Taxon Expeditions team names a species in honour of an environmental advocate. In 2018, they named a new species of beetle after famous actor and climate activist Leonardo DiCaprio. Mr. DiCaprio temporarily changed his profile photo on Facebook to the photo of “his” beetle to acknowledge this honour.


View of the Ulu Temburong National Park in Brunei from the canopy bridge.
Credit: Taxon Expeditions – Pierre Escoubas
License: CC-BY 4.0

Original source:

Schilthuizen M, Lim JP, van Peursen ADP, Alfano M, Jenging AB, Cicuzza D, Escoubas A, Escoubas P, Grafe U, Ja J, Koomen P, Krotoski A, Lavezzari D, Lim L, Maarschall R, Slik F, Steele D, Ting Teck Wah D, van Zeeland I, Njunjić I (2020) Craspedotropis gretathunbergae, a new species of Cyclophoridae (Gastropoda: Caenogastropoda), discovered and described on a field course to Kuala Belalong rainforest, Brunei. Biodiversity Data Journal 8: e47484. https://doi.org/10.3897/BDJ.8.e47484

Fifteen years & 20 million insects later: Sweden’s impressive effort to document its insect fauna in a changing world

The Swedish Malaise Trap Project (SMTP) was launched in 2003 with the aim of making a complete list of the insect diversity of Sweden. Over the past fifteen years, an estimated total of 20 million insects, collected during the project, have been processed for scientific study. Recently, the team behind this effort published the resulting inventory in the open-access journal Biodiversity Data Journal. In their paper, they also document the project all the way from its inception to its current status by reporting on its background, organisation, methodology and logistics.

The SMTP deployed a total of 73 Malaise traps – a Swedish invention designed to capture flying insects – and placed them across the country, where they remained from 2003 to 2006. Subsequently, the samples were sorted by a dedicated team of staff, students and volunteers into over 300 groups of insects ready for further study by expert entomologists. At the present time, this material can be considered as a unique timestamp of the Swedish insect fauna and an invaluable source of baseline data, which is especially relevant as reports of terrifying insect declines keep on making the headlines across the world.

The first author and Project Manager of the SMTP, Dave Karlsson started his academic paper on the project’s results years ago by compiling various tips, tricks, lessons and stories that he had accumulated over his years as SMTP’s Project Manager. Some fun examples include the time when one of the Malaise traps was destroyed by a moose bull rubbing his antlers against it, or when another trap was attacked and eaten by a group of 20 reindeer. The project even had a trap taken out by Sweden’s military! Karlsson’s intention was that, by sharing the details of the project, he would inspire and encourage similar efforts around the globe.

Animals were not as kind to our traps as humans,” recall the scientists behind the project. One of the Malaise traps, located in the Brännbergets Nature Reserve in Västerbotten, was destroyed by a bull moose rubbing his antlers against it.
Photo by Anna Wenngren

Karlsson has worked with and trained dozens of workers in the SMTP lab over the past decade and a half. Some were paid staff, some were enthusiastic volunteers and a good number were researchers and students using SMTP material for projects and theses. Thus, he witnessed first-hand how much excitement and enthusiasm the work on insect samples under a microscope can generate, even in those who had been hesitant about “bugs” at first.

Stressing the benefits of traditional morphological approaches to inventory work, he says: “Appreciation for nature is something you miss when you go ‘hi-tech’ with inventory work. We have created a unique resource for specialists in our sorted material while fostering a passion for natural history.”

Sorted SMTP material is now available to specialists. Hundreds of thousands of specimens have already been handed over to experts, resulting in over 1,300 species newly added to the Swedish fauna. A total of 87 species have been recognised as new to science from the project thus far, while hundreds more await description.

The SMTP is part of the Swedish Taxonomy Initiative, from where it also receives its funding. In its turn, the latter is a project by the Swedish Species Information Center, a ground-breaking initiative funded by the Swedish Parliament since 2002 with the aim of documenting all multicellular life in Sweden.

The SMTP is based at Station Linné, a field station named after the famous Swedish naturalist and father of taxonomy, Carl Linneaus. Situated on the Baltic island of Öland, the station is managed by Dave Karlsson. Co-authors Emily Hartop and Mathias Jaschhof are also based at the station, while Mattias Forshage and Fredrik Ronquist (SMTP Project Co-Founder) are based at the Swedish Museum of Natural History.

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Original source:

Karlsson D, Hartop E, Forshage M, Jaschhof M, Ronquist F (2020) The Swedish Malaise Trap Project: A 15 Year Retrospective on a Countrywide Insect Inventory. Biodiversity Data Journal 8: e47255. https://doi.org/10.3897/BDJ.8.e47255

Second of its kind ‘sharpshooter’ leafhopper from Brazil ‘strikes’ with its colouration

When, in 2014, Brazilian researchers stumbled across a never-before-seen red-eyed leafhopper feeding inside the rosettes of bromeliads, growing in the restingas of southeastern Brazil, they were certain it was a one-of-a-kind discovery. Described as new-to-science species, as well as genus (Cavichiana bromelicola) and added to the sharpshooter tribe Cicadellini, it became the first known case of a leafhopper feeding on otherwise nutrition-poor bromeliads in their natural habitat. 

Newly described sharpshooter species Cavichiana alpina (left) and the only other leafhopper (Cavichiana bromelicola, right) known to feed on bromeliads
Photo by Gabriel Mejdalani

Several years later, however, a team of entomologists from Universidade Federal do Rio de Janeiro carried out fieldwork in a mountainous area of southeastern Brazil and, as a result, another bromelicolous leafhopper species of the genus was discovered: Cavichiana alpina. Only, the new one appeared even more spectacular. 

The new species, described and illustrated in the open-access journal Zoologia, is known from Itatiaia National Park (southeastern Brazil), where it can be found at altitudes above 1,800 m a.s.l. In fact, its characteristic mountainous habitat came to determine its species name (alpina). In contrast, its relative was originally described exclusively from sea level regions, even though the latest field trips have recorded it from a site located at 1,250 m a.s.l. 

Slightly larger than the previously known C. bromelicola and similarly red-eyed, what most remarkably sets apart the newly-described species is its colouration. Rather than a single large yellow blotch contrasting against the dark-brown to black back of the insect, this sharpshooter sports a motley amalgam of red and blue covering most of its upper side.

In conclusion, the researchers explain that the peculiarity of the two known Cavichiana species is best attributed to a putative common ancestor that had likely once been widely distributed in southeastern and southern Brazil. Later, they speculate, a vicariant event, such as the uplift of the southeastern Brazilian mountain ranges during the latest Eocene and Oligocene, might have caused its diversification into two separate species.

Newly described sharpshooter species Cavichiana alpina (top) and the only other leafhopper (Cavichiana bromelicola, bottom) known to feed on bromeliads in their natural habitat
Photo by Gabriel Mejdalani

Original source: 
Quintas V, Takiya DM, Côrte I, Mejdalani G (2020) A remarkable new species of Cavichiana (Hemiptera: Cicadellidae: Cicadellinae) from southeastern Brazil. Zoologia 37: 1-8. https://doi.org/10.3897/zoologia.37.e38783

19th-century bee cells in a Panamanian cathedral shed light on human impact on ecosystems

About 120 clusters of 19th-century orchid bee nests were found during restoration work on the altarpiece of Basilica Cathedral in Casco Viejo (Panamá). Having conducted the first pollen analysis for these extremely secretive insects, the researchers identified the presence of 48 plant species, representing 23 families.

Casco Viejo, Panamá in 1875, as seen from the summit of Cerro Ancón.
A white tower of the Cathedral where bees were nesting is visible in the distant background in the centre of the peninsula.
Photo by Eadweard Muybridge, courtesy of the Smithsonian American Art Museum; gift of Mitchell and Nancy Steir.

Despite being “neotropical-forest-loving creatures,” some orchid bees are known to tolerate habitats disturbed by human activity. However, little did the research team of Paola Galgani-Barraza (Smithsonian Tropical Research Institute) expect to find as many as 120 clusters of nearly two-centuries-old orchid bee nests built on the altarpiece of the Basilica Cathedral in Casco Viejo (Panamá). Their findings are published in the open-access Journal of Hymenoptera Research.

Locations of nest cell aggregations of Eufriesea surinamensis within the Cathedral in Casco Viejo, Panamá
Photo by Paola Galgani-Barraza

This happened after restoration work, completed in 2018 in preparation for the consecration of a new altar by Pope Francis, revealed the nests. Interestingly, many cells were covered with gold leaf and other golden material applied during an earlier restoration following an 1870 fire, thus aiding the reliable determination of the age of the clusters. The cells were dated to the years prior to 1871-1876.

The bee species, that had once constructed the nests, was identified as the extremely secretive Eufriesea surinamensis. Females are known to build their nests distant from each other, making them very difficult to locate in the field. As a result, there is not much known about them: neither about the floral resources they collect for food, nor about the materials they use to build their nests, nor about the plants they pollinate.

However, by analysing the preserved pollen for the first time for this species, the researchers successfully detected the presence of 48 plant species, representing 43 genera and 23 families. Hence, they concluded that late-nineteenth century Panama City was surrounded by a patchwork of tropical forests, sufficient to sustain nesting populations of what today is a forest-dwelling species of bee.

Not only did the scientists unveil important knowledge about the biology of orchid bees and the local floral diversity in the 19th century, but they also began to uncover key information about the functions of natural ecosystems and their component species, where bees play a crucial role as primary pollinators. Thus, the researchers hope to reveal how these environments are being modified by collective human behaviour, which is especially crucial with the rapidly changing environment that we witness today.

The orchid bee Eufriesea surinamensis
Photo by Paola Galgani-Barraza

Original source:

Galgani-Barraza P, Moreno JE, Lobo S, Tribaldos W, Roubik DW, Wcislo WT (2019) Flower use by late nineteenth-century orchid bees (Eufriesea surinamensis, Hymenoptera, Apidae) nesting in the Catedral Basílica Santa María la Antigua de Panamá. Journal of Hymenoptera Research 74: 65-81. https://doi.org/10.3897/jhr.74.39191