Tag: open access

Making the most of conferences with modern publishing and indexing practices

Given scientific conferences present academics with the fantastic opportunity to meet up and discuss their latest work, as well as share their vision for the future of their field, it’s no wonder that, historically, the majority of ground-breaking science can easily be traced back to a particular event.

This said, don’t you think that we need to do everything within our powers to ensure the visibility, dissemination and long-term accessibility of research presented and linked to these wonderful drivers of scientific progress that conferences are? Similarly to the care conference organisers take to make sure the event runs smoothly and the attendants are happy with the programme and enjoy themselves, the organisational committee should also be thinking how to preserve all those promising pieces of research well after the event is over.

Here at Pensoft, an open-access scholarly publisher, founded by scientists, we’ve been contemplating for a while now how to encourage and support the community to efficiently open up the valuable outputs to researchers and readers well beyond the publication of abstracts in an abstract book of the conference.

As a result, we came up with several simple, yet efficient publishing solutions for scientific conferences to collect and contextualise various research outputs either presented at or resulting from the event.

Bear in mind that with any solution, all publications enjoy the benefits seen in conventional research papers, such as:

Crossref registration and individual DOI to ensure preservation;
Publication in PDF, semantically enhanced HTML and data-minable XML formats to improve readability, accessibility and findability;
Indexing and archiving at multiple, industry leading databases to increase visibility;
PR and social media promotion to boost outreach to various audiences.

Collections of conference abstracts, posters and presentations

Conference (video) abstracts, posters and presentations are easily the first to fall victims of the ephemerality of an event, yet these are too often the stepping stones to major scientific discoveries. This is why a few years back we launched ARPHA Conference Abstracts (ACA), where conference organisers can open their own collection and provide the participants with submission, review and publication of their abstracts ahead of the conference.

Furthermore, these abstracts can be handled editorially in sub-collections, e.g. the convenors of symposia or working groups within a conference will take care of the abstracts submitted to them, thus spreading the editorial workload across larger teams of editors and organisers.

Not only will conference organisers spare themselves the worries about providing a special platform for abstracts submissions, but this will also facilitate presenting authors, who will be able to easily point to their contribution before, during or after their presentations. On the contrary, the abstracts are assigned with DOIs, published in human-readable PDF and HTML and machine-actionable JATS XML, permanently preserved on ARPHA and Zenodo, and easy to find, access and cite, just like a conventional research paper, providing authors with full credit for their work early on.

Further, with ACA, the conference abstracts can be enhanced into what we call “extended abstracts”, meaning they can also include data, images, videos and multimedia. After the conferences, we can add video recordings of the presentations or graphic files of posters, so that these are visualised on the page of each abstract.

For example, take a look at the conference abstract collection of the Vth International Congress on Biodiversity: “Taxonomy, Speciation and Euro-Mediterranean Biodiversity”.

Conference proceedings

About the time we launched ACA, we also created ARPHA Proceedings, in order to also find a place for full-text conference papers. Similarly, the platform supports dedicated collections, where conference attendants are invited to submit and publish dynamically articles under the imprint of the event.

Conference papers in ARPHA Proceedings can also include data, figures and citations, and can also be updated with video recordings, posters and presentations following the conference.

Check out an example by the VI International Forum on Teacher Education.

Article topical collections and special issues resulting from conferences

Naturally, papers resulting from a particular conference are contextually linked, so a one-stop place to discover topical studies sharing one and the same topic would be greatly appreciated by readers and future researchers. In turn, this would lead to better viewership and citability of the papers in the collection.

With our user-friendly, dedicated workflow for special issues and permanent topical article collections, we’ve made it easy for guest editors across our journals to pitch and manage article collections, in order to bring together valuable and related studies. Using such a collection under the theme of your conference in a suitable journal, you can invite your conference’s participants or, better yet, all scientists working within the field, to submit their work in a nice package of topical science. We’d be happy to assist you with the identification of the most suitable journal for your conference, authors and goals.

See an example from One Ecosystem and the collection “Mapping and assessment of ecosystem condition and ecosystem services across different scales and domains in Europe”, the result from the “Mapping and assessment of ecosystem services – Science in action” conference, held in 2017.

Bringing together traditional and non-conventional research outputs, (e.g. research ideas, grant proposals, conference materials or workshop reports) with RIO Journal’s article collections

Undoubtedly, valuable research outcomes come in many shapes and sizes well beyond research papers, conference abstracts, posters and proceedings. We are firm supporters that every research item, even early and interim outputs, could be of value to the scientist next in line within a particular study.

This is why we launched the award-winning journal Research Ideas and Outcomes (RIO), where your collections can include both conventional and non-traditional research outputs, such as research ideas, posters, workshop reports, forum papers, policy briefs, software and data management plans to name a few. Furthermore, in RIO, you can even link articles or preprints published elsewhere to your collection via their metadata. Similarly to other Pensoft journals, in RIO, you will have the full control to whom you are opening your collection for submissions, allowing you to either limit it to the outcomes coming from your conference or welcome submissions from other researchers as well.

A permanent topical collection in RIO Journal may include a diverse range of both traditional and unconventional research outputs, as well as links to publications from outside the journal (see What can I publish on the journal’s website).

See the Brainhack 2016 Project Reports, whose aim is to collate reports from the 2016 Brainhack events. Also, check out the collection of the European Biodiversity Observation Network (EU BON) Project, providing a nice example for a wide range of publication types.

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Don’t hesitate to get in touch to discuss your own case and select the best option for your conference – we’ll be happy to hear from you!

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All articles published in Pensoft journals at your fingertips with the Researcher app

Following a recent integration with the novel, social network-style research discovery app Researcher, the scholarly platform ARPHA has taken yet another step to ensure scholarly publications from across its open-access, peer-reviewed journal portfolio are as easy to find and read as possible. Now, research papers published in all Pensoft’s and all other journals hosted on ARPHA Platform can reach the 1.8 million current users of Researcher directly on their smartphones.

Following a recent integration with the novel, social network-style research discovery app Researcher, the scholarly publishing platform ARPHA has taken yet another step to ensure scholarly publications from across its open-access, peer-reviewed journal portfolio are as easy to find and read as possible. Now, research papers published in all Pensoft’s, as well as all other journals hosted on ARPHA, can reach the 1.8 million current users of Researcher directly on their screens.

Similarly to the world’s best known and used social media networks: Twitter, LinkedIn and Facebook, Researcher allows its users, scientists and academics, to follow their favourite scholarly journals and topics, in order to receive their content in a personalised newsfeed format, either on their phones or computers. Thus, they can stay up to date with the latest research in their scientific fields by simply scrolling down: much like what they are already used to in their everyday life outside academia.

Similarly to the well-known social network apps, Researcher lets users bookmark papers to go back to later on and even invite friends to join the platform. Furthermore, the users can also synchronise their accounts with their ORCID iDs, in order to load their own papers on their profiles on Researcher.

The Researcher app fetches new publications from all indexed journals several times a day, thus ensuring that a user’s newsfeed is updated in almost real time. Now, the ARPHA-hosted journals have joined the 17,000 academic outlets from across the sciences already sharing their publications on the app.

“At Pensoft, we are perfectly aware that good and open science practices go far beyond cost-free access to research articles. In reality, Open Science is also about easier findability and reusability, that is the probability one stumbles across a particular research publication, and consequently, cite and build on the findings in his/her own studies. By indexing our journals with Researcher, we’re further facilitating the discoverability of their content to the benefit of the authors who trust us with their work,”
says ARPHA’s and Pensoft’s founder and CEO Prof. Lyubomir Penev.

“We share ARPHA’s belief that Open Science means more than just free access – it means giving scholarly and scientific content the best chance to get in front the right reader at the right time. Our mission is to make sure that scientists and researchers never miss vital research. This partnership will ensure that distribution to our users across the world is built into the ARPHA platform – boosting discoverability and smoothing the path to impact,”
adds Olly Cooper, CEO of Researcher.

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Pensoft to publish the paleontology and geobiology journal Zitteliana on behalf of SNSB

Following the recent contract between the State Natural History Collection of Bavaria (Staatliche Naturwissenschaftliche Sammlungen Bayerns or SNSB) and the scholarly publisher and technology provider Pensoft, the scholarly peer-reviewed, open-access journal on paleontology and geobiology Zitteliana will be published on the technologically advanced scholarly publishing platform ARPHA.

Expected later in 2020, Zitteliana will not only benefit from its own sleek-looking and user-friendly website, but will also enjoy a long list of services and high-tech features and human-provided services delivered from ARPHA’s signature fast-track, end-to-end publishing system.

One thing that will greatly appeal to submitting authors, editors and reviewers is that the collaboration-focused ARPHA Platform supports manuscripts all the way from submission, peer review, editing, publication, dissemination and archiving within its online environment. On the other hand, to the benefit of readers, after publication, the articles are made available in PDF, machine-readable JATS XML formats, and semantically enriched HTML, which prompts discoverability, accessibility, citability and reusability. In addition, the journals will use all unique services offered by ARPHA, such as data publishing, linked data tables, semantic markup and enhancements, automated export of sub-article elements and data to aggregators, web-service integrations with more than 40 world-class indexing and archiving databases, sub-article-level usage metrics, and more.

Zitteliana is a scholarly journal covering all fields of paleontology and geobiology by the Bavarian State Collection of Palaeontology and Geology (SNSB): a research institution for natural history in Bavaria, comprising five State Collections. Initially limited to publications studying either the materials deposited in SNSB’s own collections, or topics related to the geology and palaeontology of Bavaria and adjacent regions, these days, Zitteliana welcomes articles in all fields of paleontology and geobiology. Encouraged are submissions on paleobiology, numerical paleontology, paleobiogeography, paleogenomics, palaeooceanography, biosedimentology, multiproxy and sequential stratigraphy, biodiversity research, and actuopaleontology, as well as contributions to the journal’s traditionally well-represented topics, such as paleontological taxonomy, systematics, phylogeny, and regional geology.

“It’s a great delight for Pensoft to be partnering such a prominent natural history institution like the SNSB and publish this particular journal of theirs. With our joint expertise and devotion, I am certain that we will successfully address major needs of the research community: readers, authors and their affiliates alike,”
says Pensoft and ARPHA’s founder and CEO Prof. Lyubomir Penev.

The SNSB is the latest major German research institution to collaborate with Pensoft and choose ARPHA Platform for its journals. Since 2014, the Natural History Museum Berlin has trusted the publisher with its historical titles: Deutsche Entomologische Zeitschrift and Zoosystematics and Evolution. In 2017, Evolutionary Systematics, another prominent journal with a legacy in the field of zoology by the University of Hamburg followed suit. In 2020, we will be also seeing the move of three journals by the Senckenberg Nature Research Society: Arthropod Systematics & Phylogeny, Vertebrate Zoology and Geologica Saxonica.

About SNSB:

The Bavarian Natural History Collections (Staatliche Naturwissenschaftliche Sammlungen Bayerns, SNSB) are a research institution for natural history in Bavaria. They encompass five State Collections (zoology, botany, paleontology and geology, mineralogy, anthropology and paleoanatomy), the Botanical Garden Munich-Nymphenburg and eight museums with public exhibitions in Munich, Bamberg, Bayreuth, Eichstätt and Nördlingen.

Research conducted by over 30 permanent and 30 third-party funded scientists, currently employed at the SNSB, focuses mainly on the past and present bio- and geodiversity and the evolution of animals and plants. To achieve this, the institution keeps large scientific collections (more than 30,000,000 specimens). The collections and museums also play an instrumental role in public and academic education.

Italian Society of Vegetation Science signs with Pensoft to publish its journal on ARPHA

The first 2020 papers of the open-access, peer-reviewed international journal Plant Sociology are now available on the journal’s new, user-friendly and visually appealing website

Having succeeded the historical journals of the Italian Society of Vegetation Science (Società Italiana di Scienza della Vegetazione): Fitosociologia (1990-2011) and Notiziario della Societa Italiana di Fitosociologia (1964-1989), the open-access, peer-reviewed international journal Plant Sociology undergoes another major transformation by moving to the technologically advanced ARPHA Platform, after signing with the scholarly publisher and technology provider Pensoft.

As a result of the recently started partnership, the first 2020 papers of Plant Sociology are now available on the journal’s new website. All pre-2020 issues remain available on the former website.

With a wide scope covering vegetation studies from plant community to landscape level, Plant Sociology puts a special focus on topics such as Plant Sociology and vegetation survey for developing ecological models, as well as plant classification, monitoring, assessment, management and conservation, as long as the studies are based on rigorous and quantitative measures of physical and biological components.

Amongst the first newly published papers is an article by a team from the University of L’Aquila, which reports on two years of observations of the vegetation dynamics at the Gran Sasso – Monti della Laga National Park in central Italy, after the protected area suffered from an accidental fire of anthropogenic origin in 2017. With their study, the researchers aim to determine the potential of the Sentinel-2 satellite as a tool to measure, identify and monitor the short-term response of vegetation in a peculiar mountainous landscape.

Another new publication presents a phytosociological survey on the weed vegetation of two crops of Protected Designation of Origin: the bean “Fagiolo Cannellino di Atina” and the red pepper “Peperone di Pontecorvo” – both growing exclusively within a few hundreds of square kilometres in the Province of Frosinone (central Italy), conducted at four selected farms by researchers at the Sapienza University of Rome.

Thanks to the Pensoft’s signature open-access scholarly publishing platform ARPHA, Plant Sociology demonstrates a complete makeover, including a modern and user-friendly interface in addition to a long list of high-tech perks, meant to ensure that published articles are easy to discover, access, cite and reuse by both humans and machines all over the world.

Furthermore, all users of the journal’s system: authors, editors and reviewers alike, are to greatly benefit from ARPHA’s integrated approach to the publication process. This means that once submitted each manuscript goes through the whole cycle: from review and copy/layout editing to publication, dissemination and archiving without leaving ARPHA’s collaboration-focused online environment.

Plant Sociology has a completely renewed Editorial board, which sees Daniela Gigante from the University of Perugia in the role of Editor-in-Chief, and Simonetta Bagella (University of Sassari), Gianni Bacchetta (University of Cagliari) and Daniele Viciani (University of Florence) as Co-editors. The Editorial board is complemented by a Consultant editor and an Editorial secretary (respectively, Edoardo Biondi and Diana Galdenzi, both from the Polytechnic University of Marche, Ancona). A large, international Editorial team includes 35 members with specific skills and long-dated expertise in various fields related to vegetation science. A dedicated Social media team takes care of the dissemination of the journal.

“At the Plant Sociology‘s Editorial board, we are looking with great expectations to the cooperation with Pensoft, certain that the publisher’s skills and experience will support the journal in its growth and consolidation as an international reference point for vegetation science studies,”
says Editor-in-Chief Dr Daniela Gigante.

“It’s delightful to have the Italian Society of Vegetation Science putting their trust in us with their signature journal. With our strong background in scholarly publishing, technology development and open science practices, I am certain that we are to provide the right venue for a high-quality and enterprising journal like Plant Sociology,”
says ARPHA’s and Pensoft’s founder and CEO Prof. Lyubomir Penev.

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Acta Biologica Sibirica signs with Pensoft and moves to ARPHA

Acta Biologica Sibirica, an open-access, peer-reviewed journal of Altai State University, with its content on original research in the field of experimental and field biology, moves to Pensoft and the publisher’s scholarly platform ARPHA. The journal has been published since 2015 and follows all the standards in modern biological research and Open Access policy. The first papers published in 2020 are already available on a brand new user-friendly website, running on ARPHA publishing platform.

Acta Biologica Sibirica
Credit: Acta Biologica Sibirica and Pensoft
License: CC-BY 4.0 — The first papers in 2020 of Acta Biologica Sibirica, journal of Altai State University, are published on the innovative ARPHA publishing platform and already available online on a user-friendly brand new website
Credit:*Acta Biologica Sibirica* and Pensoft
License: CC-BY 4.0

Acta Biologica Sibirica is an open-access, peer-reviewed journal on the biodiversity of Siberia and the adjacent lands by Altai State University. Since 2015, it has been publishing original research in the field of experimental and field biology.

Starting from 2020, Acta Biologica Sibirica moves to the full-featured technologically advanced platform ARPHA and will be published in collaboration with the scholarly publisher and technology provider Pensoft.

Pensoft’s original publishing system ARPHA allows Acta Biologica Sibirica to publish original research papers, reviews, short communications, letters and discussion papers, book reviews and memorial articles. The scholarly platform was designed to facilitate authors in the manuscript writing, submission and review process as end-to-end experience, including publication of the data and multimedia content in the form, suitable for both enhanced high-tech human and machine discoverability of the scholarly outputs.

Acta Biologica Sibirica accepts for publication papers in taxonomy, phylogeny, biogeography, faunistics, floristics, biological systematics, nature conservation and protected areas. In the fields of faunistics and floristics there are several types of articles, available for submission: floral and faunal lists on any region of the world, faunal and floral discoveries (e.g. species newly recorded in a particular region, additions to previously published inventories), papers on methodology of faunal and floral studies.

«Our basic task is to turn our journal into a high-quality world-class publication. Without the help of modern publishers, this is almost impossible. The choice of the publisher was perfectly logical – the reputation of Pensoft Publishers and its founder, the famous Bulgarian zoologist Lubomir Penev, is impeccable. To stand in one cohort with powerful publications with a long history is an honor for us. High standards of editing and reviewing manuscripts, the absolute level of originality and scientific novelty – these are the criteria on which we will rely»,
comments the Editor-in-Chief of the journal, Professor of Altai University Roman Yakovlev.

«At Pensoft, we are delighted to initiate this wonderful partnership with yet another renowned research institution in Russia, namely Altai State University. With our long-year experience in zoological and biodiversity research publishing and dissemination, I am certain that the journal has found a fitting place in the family of Pensoft and ARPHA»,
comments Prof. Lyubomir Penev, CEO and founder of Pensoft and ARPHA.

The first papers of 2020 are already available online on the new website of Acta Biologica Sibirica.

Within the pioneering papers published in the renewed journal, there is a research article about the first result of DNA-studies on the Central Asiatic owlet moths in the genus Euchalcia. The studied specimens were collected in Kyrgyzstan and Kazakhstan during the expeditions of the Russian Entomological Society in 2017-2019. When comparing a specific mitochondrial gene (cytochrome C oxidase subunit I or COI) between various species, the scientists revealed that the difference amongst European Euchalcia species is smaller than the one amongst high-mountainous Central Asiatic species.

Another study records the first occurrence of the moorland clouded yellow in Altai Region. The butterfly was found to share a mitochondrial barcode with some specimens from mountain populations from the Alps and the Czech Republic.

Colias palaeno, male, vicinity of Ozerki village, Talmenskiy district, Altai region, Russia
Credit: Nazar A. Shapoval
License: CC-BY 4.0

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Additional information

About Altai State University:

Altai State University is one of the leading Russian classical higher education institutions established in 1973. It is a major educational, research and cultural center located in the Asian part of the country, integrated into the international academic community, training the intellectual elite and conducting high-impact research.

The unique geographical position of Altai region, located in the center of Asia predestinates the University’s mission – to appear as an international research and educational center that integrates, develops and spreads the modern Western, Russian and Asian knowledge in education, science and culture within the Asian region.

About ARPHA:

ARPHA is the first end-to-end, narrative- and data-integrated publishing solution that supports the full life cycle of a manuscript, from authoring to reviewing, publishing and dissemination. ARPHA provides accomplished and streamlined production workflows that can be customized according to the journal’s needs. The platform enables a variety of publishing models through a number of options for branding, production and revenue models to choose from.

About Pensoft:

Pensoft is an independent academic publishing company, well-known worldwide for its innovations in the field of semantic publishing, as well as for its cutting-edge publishing tools and workflows. In 2013, Pensoft launched the first ever end to end XML-based authoring, reviewing and publishing workflow, as demonstrated by the Pensoft Writing Tool (PWT) and the Biodiversity Data Journal (BDJ), now upgraded to the ARPHA Publishing Platform. Flagship titles include: Research Ideas and Outcomes (RIO), One Ecosystem, ZooKeys, Biodiversity Data Journal, PhytoKeys, MycoKeys and many more.

Contacts:

Prof. Lyubomir Penev, founder and CEO at ARPHA and Pensoft
Email: penev@pensoft.net

Prof. Alex Matsyura, Editor-in-Chief of Acta Biologica Sibirica
Email: amatsyura@gmail.com

Prof. Roman Yakovlev, Editor-in-Chief of Acta biologica sibirica
Email: yakovlev_asu@mail.ru

Vegetation Classification and Survey (VCS), the new journal of the Int’l Association for Vegetation Science

The journal is to launch with a big editorial and several diverse, high-quality papers over the next months

In summer 2019 IAVS decided to start a new, third association-owned journal, Vegetation Classification and Survey (VCS), next to Journal of Vegetation Science (JVS) and Applied Vegetation Science (AVS).

Vegetation Classification and Survey (VCS) is an international, peer-reviewed journal of plant community ecology published on behalf of the International Association for Vegetation Science (IAVS) together with its sister journals, Journal of Vegetation Science (JVS) and Applied Vegetation Science (AVS). It is devoted to vegetation survey and classification at any organizational and spatial scale and without restriction to certain methodological approaches.

The journal publishes original papers that develop new vegetation typologies as well as applied studies that use such typologies, for example, in vegetation mapping, ecosystem modelling, nature conservation, land use management or monitoring. Particularly encouraged are methodological studies that design and compare tools for vegetation classification and mapping, such as algorithms, databases and nomenclatural principles. Papers dealing with conceptual and theoretical bases of vegetation survey and classification are also welcome. While large-scale studies are preferred, regional studies will be considered when filling important knowledge gaps or presenting new methods. VCS also contains Permanent Collections on “Ecoinformatics” and “Phytosociological Nomenclature”.

VCS is published by the innovative publisher Pensoft as a gold open access journal. Thanks to support from IAVS, we can offer particularly attractive article processing charges (APCs) for submissions during the first two years. Moreover, there are significant reductions for IAVS members, members of the Editorial Team and authors from low-income countries or with other financial constraints (learn more about APCs here).

Article submissions are welcomed at: https://vcs.pensoft.net/

Post by Jürgen Dengler, Idoia Biurrun, Florian Jansen & Wolfgang Willner, originally published on Vegetation Science Blog: Official blog ot the IAVS journals.

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Viticulture Data Journal: Non-conventional papers foster Open Science & sustainability

Non-conventional, yet pivotal research results: data, models, methods, software, data analytics pipelines and visualisation methods, related to the field of viticulture, find a place in a newly launched, open-access and peer-reviewed Viticulture Data Journal.

The publishing venue is one of the fruits borne during the collaboration between scholarly publisher and technology provider Pensoft, its self-developed ARPHA Platform and the EU project AGINFRA+, whose mission is to provide a sustainable channel and data infrastructure for the use of cooperating, but not fully connected user communities working within the agricultural and food sciences.

The novel journal brings together a wide range of topics related to the field of viticulture: from genetic research, food safety of viticultural products to climate change adaptation of grapevine varieties through grape specific research. Amongst these are:

Phenotyping and genotyping
Vine growth and development
Vine ecophysiology
Berry yield and composition
Genetic resources and breeding
Vine adaptation to climate change, abiotic and biotic stress
Vine propagation
Rootstock and clonal evaluation
Effects of field practices (pruning, fertilization etc.) on vine growth and quality
Sustainable viticulture and environmental impact
Ampelography
Plant pathology, diseases and pests of grapevine
Microbiology and microbiological risk assessment
Food safety related to table grapes, raisins, wine, etc.

With the help of the ARPHA Platform’s signature writing tool, authors are able to use a set of pre-defined, yet flexible manuscript templates: Data Paper, Methods, Emerging Techniques, Applied Study, Software Description, R Package and Commentary. Furthermore, thanks to the advanced collaborative virtual environment provided by the tool, authors, but also reviewers, editors and other invited contributors enjoy the convenience of working within the same consolidated online file all the way from the authoring and peer review stages to copy editing and publication.

“The Viticulture Data Journal was created to respond to the major technological and sociological changes that have influenced the entire process of scholarly communication towards Open Science,”
explain the editors.

“The act of scientific publishing is actually the moment when the long effort of researchers comes to light and can be assessed and used by other researchers and the wider public. Therefore, it is little wonder that the main arena of transition from Open Access to Open Science was actually the field of academic publishing,”
they add.

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The first research publication made available in VDJ is a data paper by the research team from Agricultural University of Athens: Dr Katerina Biniari, Ioannis Daskalakis, Despoina Bouza and Dr Maritina Stavrakaki. In their study, they assess and compare both the qualitative and quantitative characters of the grape cultivars ‘Mavrodafni’ and ‘Renio’, grown in different regions of the Protected Designation of Origin Mavrodafni Patras (Greece). The associated dataset, containing the mechanical properties, the polyphenolic content and the antioxidant capacity of skin extracts and must of berries of the two cultivars, is available to download as supplementary material from the article.

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During the AGINFRA+ project, ARPHA has been extended to be used from the AGINFRA+ Virtual Research Environment (VRE), which would allow the authors to use the VRE as an additional gate to the AWT and the journal, as well as to benefit from the integration of AWT with several other services offered by the AGINFRA+ platform. The AGINFRA+ platform has been designed as a Gateway providing online access through a one-stop endpoint to services, aiming at the integration of the traditional narrative of research articles with their underlying data, software code and workflows.

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Viticulture Data Journal is indexed by Altmetric, CrossRef, Dimensions, EBSCOhost, Google Scholar, Mendeley, Microsoft Academic, Naviga (Suweco), OCLC WorldCat, OpenAIRE, OpenCitations, ReadCube, Ulrichsweb™, Unpaywall; and archived at CLOCKSS and Zenodo

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Food Modelling Journal: New open-access venue provides a platform for food scientists

The open-access Food Modelling Journal (FMJ) was launched by the AGINFRA+ community and Pensoft with the aim to encourage food science specialists, agronomists and computer scientists to come together and work on assuring and improving food supply, quality and safety in our globalised and rapidly changing world.

An introductory editorial and an article of a unique publication type are already made available in the next-generation journal

The open-access Food Modelling Journal (FMJ) was launched by the AGINFRA+ community and Pensoft with the aim to encourage food science specialists, agronomists and computer scientists to come together and work on assuring and improving food supply, quality and safety in our globalised and rapidly changing world.

The Food Modelling Journal will be focusing on the publication of information objects and digital resources in the food science field, related (but not limited) to: food safety, food quality, food control, food defence and food design, documenting experimental or observational data and mathematical models.

By providing a platform and tools for describing scientific records and crediting for dedicated models, data, data analytics workflows and software, FMJ fosters the overall reproducibility and reusability of research.

FMJ also aims to shed light on what we refer to as research objects – data, software scripts, visualisation routines or models. Usually, they would stay undervalued, underused and uncredited, despite their importance for the scientific progress.

The focus and scope of the journal are supported by a number of specific key features:

Quality but not quantity
Cross-disciplinary approach
Open data and software code policy
Rapid turnaround time
Advanced open access and machine-readability.

It should be noted that the Open Science movement and the barrier-free access to research, is at the heart of the FMJ project.

To support its authors, the AGINFRA+ community, Pensoft and Food Modelling Journal have provided them access to the ARPHA Writing Tool, where researchers are able to work together with their co-authors, colleagues and peers on manuscripts from the drafting stage to publication.

A FSKX model run using the executable paper feature available in *Food Modelling Journal*.

A particularly appealing feature, meant to promote reproducibility, collaboration and openness in science, is the executable papers, where users can reproduce research findings using the published model and running it either with default or new parameters. By clicking an “Execute” button within the body of the article, users are taken to an external virtual environment where they will be able to execute the computation. By ‘encapsulating’ all the details needed to perform the action within the paper, this feature ensures that the published findings will remain testifiable in the future.

“While the long-lasting tradition in science used to focus on crediting researchers’ work through conventional research articles and especially by counting their citations, many exciting, useful and often invaluable products of the research cycle, such as data, software scripts, visualisation routines or models (usually called “research objects”) normally stay undervalued, underused and uncredited, despite their importance for scientific progress,” note the editorial board in the introductory editorial.

“The consequences of this neglect of the initial and intermediate steps of the research cycle in favour of the research articles or research books are obvious: scientists often repeat efforts done by others instead of using these as a stepping stone for further analyses and generating new knowledge, let alone the impossible or restricted reproducibility and reusability of research results,” they add.

The first paper of a unique publication type: FSKX (Food Safety Knowledge), is already publicly accessible in the journal. Classified as an early research outcome, the article presents a new generic model for assessing the risk of salmonellosis associated with the consumption of table eggs. To ensure the reusability of the model, the research team of Virginie Desvignes (ANSES – French Food Safety Agency) have made it available in the Food Safety Knowledge Markup Language (FSK-ML) format alongside the executable model script, visualisation script and simulation settings.

FSK-ML is an open information exchange format that is based on harmonised terms, metadata and controlled vocabulary to harmonise annotations of risk assessment models and that was significantly improved and extended during the AGINFRA+ project.

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Food Modelling Journal is indexed by BASE, CNKI, CrossRef, Dimensions, Google Scholar, J-Gate, Mendeley, Microsoft Academic, Naviga (Softweco), OCLC WorldCat, OpenAIRE, OpenCitations, ReadCube, Transpose, Ulrichsweb™ and Unpaywall; and archived at CLOCKSS, Zenodo and Portico.

Strategic collaboration agreement signed between ScienceOpen and Pensoft

The research discovery platform ScienceOpen and Pensoft Publishers have entered into a strategic collaboration partnership with the aim of strengthening the companies’ identities as the leaders of innovative content dissemination. The new cooperation will focus on the unified indexation, the integration of Pensoft’s ARPHA Platform content into ScienceOpen and the utilization of novel streams of scientific communication for the published materials.

Pensoft is an independent academic publishing company, well known worldwide for bringing novelty through its cutting-edge publishing tools and for its commitment to open access practices. In 2013, Pensoft launched the first ever, end-to-end, XML-based, authoring, reviewing and publishing workflow, now upgraded to the ARPHA Publishing Platform. As of today, ARPHA hosts over 50 open access, peer-reviewed scholarly journals: the whole Pensoft portfolio in addition to titles owned by learned societies, university presses and research institutions.

As part of the strategic collaboration, all Pensoft content and journals hosted on ARPHA are indexed in the ScienceOpen’s research and discovery environment, which puts them into thematic context of over 60 million articles and books. In addition, thousands of articles across more than 20 journals were integrated into a “Pensoft Biodiversity” Collection. Combined this way, the content benefits from the special infrastructure of ScienceOpen Collections, which supports thematic groups of articles and books equipped with a unique landing page, a built-in search engine and an overview of the featured content. The Collections can be reviewed, recommended and shared by users, which facilitates academic debate and increases the discoverability of the research.

The Pensoft Biodiversity collection is available from: https://www.scienceopen.com/collection/PensoftBiodiversity

“It is certainly great news and a much-anticipated milestone for Pensoft, ARPHA and our long-year partners and supporters from ScienceOpen to have brought our collaboration to a new level by indexing the whole ARPHA-hosted content at ScienceOpen,” comments Pensoft’s and ARPHA’s CEO and founder Prof. Lyubomir Penev. “Most of all, the integration between ARPHA and ScienceOpen at an infrastructural level means that we will be able to offer this incredible service and increased visibility to newcoming journals right away. On the other hand, by streaming fresh and valuable publicly accessible content to the ScienceOpen database, these journals will be further adding to the growth of science in the open.”

Stephanie Dawson, CEO of ScienceOpen says, “I am particularly excited to add new high-quality, open access biodiversity content from Pensoft Publishers to the ScienceOpen discovery environment as we have a very active community of researchers on ScienceOpen creating and sharing Collections in this field. We are looking forward to working with Pensoft’s innovative journals to support their open science goals.”

The collaboration reflects not only the commitment of both Pensoft and ScienceOpen to new methods of knowledge dissemination, but also the joint mission to champion open science through innovation. The two companies will cooperate at a strategic level in order to increase the international outreach of their content and services, and to make them even more accessible to the broad community.

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About ScienceOpen:

From promotional collections to Open Access hosting and full publishing packages, ScienceOpen provides next-generation services to academic publishers embedded in an interactive discovery platform. ScienceOpen was founded in 2013 in Berlin and Boston by Alexander Grossmann and Tibor Tscheke to accelerate research communication.

Rebranded Social Psychological Bulletin opens up to the world with PsychOpen GOLD & ARPHA

Formerly known as Psychologia Spoleczna, the scholarly journal is now publishing exclusively in English and is free to both readers and authors after joining the PsychOpen GOLD platform based on ARPHA

Social Psychological Bulletin (SPB), formerly known as the Polish-born Psychologia Spo?eczna, has rebranded and evolved to reflect its new international outlook and dedication to social psychological research and open science practices.

In line with its renowned legacy, the peer-reviewed journal welcomes original empirical research, theoretical review papers, scientific debates, and methodological contributions in the field of basic and applied social psychology.

However, from now on, accepted articles are to be exclusively in English and openly accessible from day one of publication. Furthermore, authors are able to publish with SPB free of charge in the name of socially committed and responsible research.

The journal places special emphasis on what its Editors-in-Chief Drs Michal Parzuchowski and Marcin Bukowski call “the updated FOCI” – an abbreviation for Focused on people, Open, Committed and Integrative.

The changes meant to lead up to the journal’s long-term progress, also outlined in the latest Editorial, come as a result of SPB joining two prime movers in the open science field – the Leibniz Institute for Psychology Information (ZPID) with its unique publication platform, PsychOpen GOLD, and Pensoft with its innovative journal publishing and management system, ARPHA.

Since 2012, PsychOpen GOLD – The European Open Access Publishing Platform for Psychology – allows for both journals and authors to increase the visibility and accessibility of novel psychological research in the spirit of open science practices free of charge.

In the new pilot project, ZPID’s PsychOpen GOLD also collaborates with the technologically advanced academic journal and book publishing platform ARPHA in order to further facilitate and increase visibility of the novel findings of societal value.

As a result of the partnership, SPB will make use of the long list of high-tech and user-friendly innovations, provided by ARPHA, which go far beyond the brand new sleek look and feel of the journal.

“We proudly present the new SPB journal to the scientific community, representing a major breakthrough in open access publishing in psychology,” says ZPID director Prof. Dr. Michael Bosnjak. “SPB on PsychOpen GOLD assisted by ARPHA is now up and running at record speed.”

“It’s really exciting to announce our partnership with ZPID, PsychOpen GOLD and SPB, in this collaborative venture to advance accessibility and visibility of research with such an impact on our own society,” says Prof. Lyubomir Penev, founder and CEO of ARPHA Platform and its developer – Pensoft Publishers. “At ARPHA and Pensoft, we have always worked towards next-age innovations in Open Science – be it improved accessibility, findability, usability or collaboration – so it only makes sense to join in this amazing initiative to open up the latest fine research in psychology.”

The journal’s first thematic issue comprises 10 forum papers (by Dariusz Doli?ski, Arie Kruglanski, Adam Factor & Katarzyna Jasko; Leonel Garcia-Marques & Mario Ferreira; Wolfgang Stroebe; Karl Halvor Teigen; Jolanda Jetten & Alexander S. Haslam; Miros?aw Kofta; Bogdan Wojciszke & Konrad Bocian; and Klaus Fiedler) dedicated to discussions on behavior and its measurement as triggered by Prof. Dariusz Dolinski’s article “Is Psychology Still a Science of Behaviour?”.

In his paper, Doli?ski calculates that the number of articles in a recent volume of the flagship Journal of Personality and Social Psychology (2017) presenting studies in which the dependent variable consisted of a real behavior was 4 out of 49 (8.2%). Out of a total number of 290 studies presented in this volume, a mere 18 (6,2%) addressed behaviour.

He argues that in addition to studying phenomena like stereotypes, attitudes, and values – which he dubs the “what, how, and why people think”, social psychology needs to also remain dedicated to the “what, why and how people act”, i.e. things such as aggression, altruism, and social influence.

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Follow the discussion in the second 2018 issue of Social Psychological Bulletin on the journal’s new website.

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