Author: Pensoft Editorial Team

Centrally-managed collections & Peer review flexibility at RIO

RIO updated its article collection approach to evolve into a “project-driven knowledge hub”, where a project coordinator, institution or conference organiser can create and centrally manage a collection under their own logo.

In 2015, Research Ideas and Outcomes (RIO) was launched to streamline dissemination of scientific knowledge throughout the research process, recognised to begin with the inception of a research idea, followed by the submission of a grant proposal and progressing to, for example, data / software management plans and mid-stage project reports, before concluding with the well-known research and review paper.

In order to really expedite and facilitate access to scientific knowledge, the hurdles for engagement with the process need to be minimized for readers, authors, reviewers and editors alike. RIO aims to lay the groundwork for constructive scientific feedback and dialogue that would then lead to the elaboration and refinement of the research work well in its early stage. 

Recently, RIO published its 300th article – about a software for analyzing time series data from a microclimate research site in the Alps – and at that occasion, the RIO team wrote an editorial summarizing how the articles published in RIO so far facilitate engagement with the respective research processes. One of the observations in this regard was that while providing access to the various stages of the research cycle is necessary for meaningful engagement, there is a need for the various outcomes to be packed together, so that we can provide a more complete context for individual published outcomes.

Read the new editorial celebrating RIO’s 5th anniversary and looking back on 300 publications. 

RIO introduced updates to its article collection approach to evolve into a “project-driven knowledge hub”, where a project coordinator, research institution or conference organiser can create and centrally manage a collection under their own logo, so that authors can much more easily contribute. Further, research outputs published elsewhere – including preprints – are also allowed, so that the collection displays each part of the ‘puzzle’ within its context. In this case, the metadata of the paper, i.e. title, authors and publication date, are displayed in the article list within the collection, and link to the original source.

Apart from allowing the inclusion of the whole diversity of research outcomes published in RIO or elsewhere, what particularly appeals to projects, conferences and institutions is the simplicity of opening and managing a self-branded collection at RIO. All they need to do is pay a one-time fee to cover the setup and maintenance of the collection, whereas an option with an unlimited number of publications is also available. Then, authors can add their work – subject to approval by the collection’s editor and the journal’s editorial office – by either starting a new manuscript at RIO and then assigning it to an existing collection; pasting the DOI of a publication available from elsewhere; or posting an author-formatted PDF document to ARPHA Preprints, as it has been submitted to the external evaluator (e.g. funding agency). In the latter two cases, the authors are charged nothing, in order to support greater transparency and contextuality within the research process.

Buttons on RIO Journal’s homepage allow users to create a new collection or add a document to an existing collection by either submitting a new manuscript via RIO Journal or pasting a DOI link of a publication from elsewhere, thus allowing for the collection to link to the original source and display the article’s metadata, i.e. title, authors and publication date.

Find more information about how to edit a collection at RIO and the associated benefits and responsibilities on RIO’s website.

Another thing we have revised at RIO is the peer review policy and workflow, which are now further clarified and tailored to the specificity of each type of research outcome.

Having moved to entirely author-initiated peer review, where the system automatically invites reviewers suggested by the author upon submission of a paper, RIO has also clearly defined which article types are subject to mandatory pre-publication peer review or not (see the full list). In the latter case, RIO no longer prompts the invitation of reviewers. Within their collections, owners and guest editors can decide on the peer review mode, guided by RIO’s existing policies.

While pre-publication peer review is not always mandatory, all papers are subject to editorial evaluation and also remain available in perpetuity for post-submission review. In both cases, reviews are public and disclose the name of their author by default. In turn, RIO registers each review with its own DOI via CrossRef, in order to recognise the valuable input and let the reviewers easily refer to their contributions. 

Both pre- and post-publication reviews at RIO are openly published alongside the paper and bear their own DOI. All papers in RIO remain available for post-publication review in perpetuity (see example).

For article types where peer review is mandatory (e.g. Research Idea, Review article, Research Article, Data Paper), authors are requested to invite a minimum of three suitable reviewers upon the submission of the paper, who are then automatically invited by the system. While significantly expediting the editorial work on a manuscript, this practice doesn’t compromise the quality of peer review in the slightest, since the editor is still overlooking the process and able to invite additional reviewers anytime, if necessary. 

For article types where peer review is not mandatory (e.g. Grant Proposal, Data Management Plan, Project Report and various conference materials), all an author needs to do is provide a statement about the review status of their paper, which will be made public alongside the article. Given that such papers have usually already been scrutinised by a legitimate authority (e.g. funding agency or conference committee), it only makes sense to not withhold their publication and duplicate academic efforts.

By the time it is submitted to RIO, a Grant Proposal like this one has often already been assessed by a legitimate funder, so it only makes sense to not undergo the process again at RIO and thereby slowing down its public dissemination.

Additionally, where the article type of a manuscript requires pre-publication review, RIO encourages the authors to click a checkbox during the submission and post their pre-review manuscript as a preprint on ARPHA Preprints, subject to a quick editorial screening, which would only take a few days.

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Further reading:

RIO shifts gears to serve as project-driven knowledge hub

Curvature values, a new aspect in the morphology of grapevine seeds

Guest blog post by Dr Emilio Cervantes

Grape seeds have a characteristic oval or pear-like shape. It has been long recognised that this form is variable, and that, in general, wild-type seeds are smaller and more rounded, while the seeds of cultivated varieties tend to be more elongated in one side, or pear-shaped.

Recently, seeds belonging to 38 cultivars stored in the collection of IMIDRA were classified in ten morphological groups, each corresponding to a new morphological model. The models are geometric figures defined by equations, and similarity to each model is evaluated by quantification of percent of the area shared by the two figures, the seed and the model (J index).

The groups thus defined were: Listán Prieto, Albillo Real, Moscatel, Doña Blanca, Hebén, Tortozón, Sylvestris, Teta de Vaca, Airén and de Cuerno.

A seed of Vitis vinifera and a graphic showing curvature values in the seed apex. Image by Dr Emilio Cervantes

An article just published in the open-access, peer-reviewed Viticulture Data Journal by the same research groups at IRNASA-CSIC, Department of Mathematics of Salamanca University and IMIDRA, presents an analysis of the curvature – the degree of variation in the points of a curve – in the apex of the cultivars. A set of points along the surface of the seed image are marked and used to obtain the Bézier curves corresponding to seed profiles. The curvature values along the curves are then calculated in Mathematica and represented. Then, the cultivars are classified according to the variation of their curvature and distribution of maximum curvature values. The groups formed based on the curvature analysis are related to the classification based on geometrical figures.

The process of obtaining the curvature values in the seed apex in the program Mathematica.
Vide by Dr Emilio Cervantes

The results show the peduncles of Vitis seeds can be ordered in three groups: 1) Acute, with a unique point of maximum curvature; 2) Plane, with two equivalent points of maximum curvature, and 3) Intermediate. According to this result, the groups based on geometric models are divided by the curvature analysis in two series:

The seeds in most of the cultivars had their pedicels flat at their apex. In consequence, representations of Bézier of their profiles had a plane form with two maximum curvature values. This type was observed in a total of 23 cultivars, including all but one of the 23 cultivars in four groups, and with the addition of Airén. The cultivars with a flat pedicel are predominant in groups Listán Prieto (Listán Prieto and Tortozona Tinta), Albillo Real (Alarije, Albillo Real, Cayetana Blanca, Graciano, Juan García and Tempranillo), eleven of the twelve cultivars of group Moscatel (all of them except Moscatel de grano menudo), the three cultivars of group Doña Blanca (Doña Blanca, Monastrell and Pedro Ximénez) and Airén.

The seeds with an acute apex belong to six cultivars in four groups: Hebén (Macabeo and Zalema, but not Hebén itself), Tortozón (Imperial and Tortozón), Airén (Mazuela) and de Cuerno.

The morphological difference between the seeds of wild grapes and cultivars of Vitis has been known for a long time, but biochemical and structural properties associated with these types remain to be investigated. Considering that lignin is an important component of the cell walls, it is possible that adaptation to agricultural conditions is associated with changes in lignin composition. Pedicel thickening and lignin synthesis may be increased in the cultivars that have their beaks plane in comparison with those varieties that present acute beaks.

Original source:

Cervantes E, Martín-Gómez JJ, Espinosa-Roldán FE, Muñoz-Organero G, Tocino Á, Cabello Sáenz de Santamaría F (2021) Seed apex curvature in key Spanish grapevine cultivars. Viticulture Data Journal 3: e66478. https://doi.org/10.3897/vdj.3.e66478

Conservationists concerned about illegal hunting and exploitation of porcupines in Indonesia

Porcupines are being illegally hunted and exploited throughout their range in Indonesia for local subsistence and commercial trade. They are reportedly in decline, yet there seems to be little control or monitoring on uptake and trade. A new study examining seizure data of porcupines in Indonesia found a total of 39 incidents from January 2013 to June 2020 involving an estimated 452 porcupines. The research was published in the open-access, peer-reviewed journal Nature Conservation.

Porcupines are frequently traded across Asia, and Indonesia, home to five species, is no exception. They are targeted for a number of reasons: their meat as an alternative source of protein, their bezoars consumed as traditional medicine, and their quills used as talismans and for decorative purposes.

A new study examining seizure data of porcupines, their parts and derivatives in Indonesia found a total of 39 incidents from January 2013 to June 2020 involving an estimated 452 porcupines. The research was published in the open-access, peer-reviewed journal Nature Conservation.

Malayan Porcupine. Photo: James Eaton

There are no harvest quotas for any porcupine species in Indonesia, which makes all hunting and trade in porcupines illegal. Of the five species found in the country, only the Sunda porcupine (Hystrix javanica) is currently protected, with its protected status only introduced in 2018. Interestingly, prior to 2018, the Malayan porcupine (H. brachyura) was the only protected porcupine species in Indonesia, but then it was removed from the updated species protection list and replaced with the Sunda porcupine. 

“The reasons for this are unclear, but certainly unwarranted, considering that the Malayan porcupine is the species most frequently identified as confiscated, and one can only assume the reason for its removal is due to its commercial value,” says Lalita Gomez, author of the study and Programme Officer of Monitor Conservation Research Society.

Porcupine for sale in an Indonesian bird market Photo: Lalita Gomez

What clearly emerges from this study is that porcupines are being illegally hunted and exploited throughout their range in Indonesia for local subsistence and commercial trade. Porcupines are reportedly in decline in Indonesia, yet there seems to be little control or monitoring on uptake and trade. This is particularly concerning because four of the five porcupine species in Indonesia have a restricted range, and three of them are island endemics – the Sumatran porcupine (H. sumatrae), Sunda porcupine, and Thick-spined porcupine (H. crassispinis).

Illegal hunting and trade of porcupines in Indonesia is facilitated by poor enforcement and legislative weakness, and it is imperative that effective conservation measures are taken sooner rather than later to prevent further depletion of these species. 

Gomez recommends that all porcupines be categorised as protected species under Indonesian wildlife laws and listed in Appendix II of the Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES). This would require any international trade to take place through a supervisory system, which would allow for regulation and make it easier to track and analyse trends, thus providing an early warning system in case wild populations begin to decline.

Original source:

Gomez L (2021) The illegal hunting and exploitation of porcupines for meat and medicine in Indonesia. Nature Conservation 43: 109-122. https://doi.org/10.3897/natureconservation.43.62750

The ants, bees and wasps of Canada, Alaska and Greenland – a checklist of 9250 species

Knowing what species live in which parts of the world is critical to many fields of study, such as conservation biology and environmental monitoring. This is also how we can identify present or potential invasive and non-native pest species. Furthermore, summarizing what species are known to inhabit a given area is essential for the discovery of new species that have not yet been known to science.

American Pelecinid Wasp (Pelecinus polyturator) from Driftwood Provincial Park, Ontario, Canada. Photo by Henri Goulet

For less well-studied groups and regions, distributional species checklists are often not  available. Therefore, a series of such checklists is being published in the open-access, peer-reviewed Journal of Hymenoptera Research, in order to address the issue for a group of organisms that, despite its size and diversity, is still poorly known: the insect order Hymenoptera, which includes ants, bees and wasps. The surveyed area spreads across northern North America, which comprises Canada, Alaska (U.S.) and Greenland (Denmark), and occupies about 9.3% of the world’s total land mass.

The last distributional survey of Hymenoptera in North America was published in 1979, where about 6000 described species were recorded from Canada and 600 from Alaska. The current survey lists 8933 species in Canada and 1513 in Alaska, marking an increase of 49% and 152%, respectively. A total of 9250 described species are recorded from northern North America. Considering that there are approximately 154,000 described species of Hymenoptera, northern North America has about 6% of the current world total. 

A cuckoo wasp of the genus Hedychridium from Manitoulin Island, Ontario, Canada. Photo by Henri Goulet

Highlights of the series will include updated distributions of over 900 species of bees, which will provide valuable insight into native pollinators at a time when honey bees are in decline. Nearly 230 species of ants and over 100 species of vespid wasps (hornets and yellow jackets) are recorded, including pest species such as the widespread pharaoh ant and the newly invasive Asian giant hornet in British Columbia.

Pigeon tremex (Tremex columba) from Manitou Lake, Manitoulin Island, Ontario, Canada. Photo by Henri Goulet

By far, the majority of species of Hymenoptera found in northern North America and the world are parasitoids, which develop on or in other invertebrate hosts and are therefore of great interest to the biological control of pests. Of the 9250 species recorded, more than three-quarters (over 7150 species) are parasitoids. These distributional lists provide essential baseline information required prior to undertaking studies to introduce biological control agents of invasive pests that may have escaped their native, natural enemies when they arrived in North America.

Megarhyssa macrura from Ottawa, Ontario, Canada. Photo by Henri Goulet

The topical collection “Checklists of the Hymenoptera of Canada, Alaska and Greenland” is to contain a total of eleven papers, where the introduction and the first two checklists: of sawflies (758 species) and one of the groups of “microhymenoptera” (the chalcidoid parasitic wasps) (1246 species) have just been published.The other checklists are to follow over the next several years. The associated data are also being uploaded to the Global Biodiversity Information Facility (GBIF), allowing for periodic updates over time.

When complete, this will be the largest species checklist for any group of organisms in northern North America. Considering that it is estimated that we currently have documented less than half of the species of Hymenoptera present in northern North America, there is still a great amount of work to do on this fascinating group of insects.

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Original sources:

Bennett AMR (2021a) Checklists of the Hymenoptera of Canada, Alaska and Greenland – Introduction. Journal of Hymenoptera Research 82: 1-19. https://doi.org/10.3897/jhr.82.60054

Bennett AMR (2021b) Checklist of the Hymenoptera of Canada, Alaska and Greenland. Agriculture and Agri-Food Canada. Checklist dataset https://doi.org/10.5886/4piso5 [accessed via GBIF.org: 12 March 2021].

Goulet H, Bennett AMR (2021) Checklist of the sawflies (Hymenoptera) of Canada, Alaska and Greenland. Journal of Hymenoptera Research 82: 21-67. https://doi.org/10.3897/jhr.82.60057

Huber JT, Bennett AMR, Gibson GAP, Zhang YM, Darling DC (2021) Checklist of Chalcidoidea and Mymarommatoidea (Hymenoptera) of Canada, Alaska and Greenland. Journal of Hymenoptera Research 82: 69-138. https://doi.org/10.3897/jhr.82.60058

Bees thrive where it’s hot and dry: a unique biodiversity hotspot located in North America

The United States-Mexico border traverses through large expanses of unspoiled land in North America, including a newly discovered worldwide hotspot of bee diversity. Concentrated in 16 km2 of protected Chihuahuan Desert are more than 470 bee species, a remarkable 14% of the known United States bee fauna.

One of the late-summer desert bees, female Svastra sp. on flower of Verbesina enceliodes. Photo by Bruce D. Taubert

This globally unmatched concentration of bee species is reported by Dr. Robert Minckley of the University of Rochester and William Radke of the United States Fish and Wildlife Service in the open-access, peer-reviewed Journal of Hymenoptera Research.

Scientists studying native U.S. bees have long recognized that the Sonoran and Chihuahuan deserts of North America, home to species with interesting life histories, have high bee biodiversity. Exactly how many species has largely remained speculation. Together with students from Mexico, Guatemala and the United States, the authors made repeated collections over multiple years, identifying more than 70,000 specimens. 

Without such intensive collecting, a full picture of the bee diversity would not have been possible. Most of these bee species are solitary, without a queen or workers, which visit flowers over a 2-4 week lifespan and specialize on pollen and nectar from one to a few plants. Furthermore, these desert species experience periodic drought, which the immature stages survive by going into dormancy for years, much like the seeds of the desert plants they pollinate. 

One of the spring-active desert bees, female Centris caesalpiniae on flower of Krameria. Photo by Bruce D. Taubert

Additionally, bee diversity is notoriously difficult to estimate and compare among studies, because of differences in the collecting techniques and the size of the studied area. An unexpected benefit of the regular and intensive sampling for this study was the opportunity to test if the observed bee diversity approached the true bee diversity in this region, or if many more species were yet to be found. In this case, the larger San Bernardino Valley area is home to 500 bee species, only slightly above the number of species recovered along the border – an unusually robust confirmation of the researchers’ estimate. 

One of the spring-active desert bees, male Centris caesalpiniae on flower of Acacia. Photo by Bruce D. Taubert

What we know about the decline of bees due to human activity, along with that of other pollinators, is based primarily on diversity data from human-modified habitats. Needed is baseline information on native bees from pristine areas to help us assess the magnitude and understand the ways in which humans impact bee faunas. This study from the Chihuahuan Desert is therefore an important contribution towards filling that knowledge gap from one of the bee biodiversity hotspots in the world. 

Original source

Minckley RL, Radke WR (2021) Extreme species density of bees (Apiformes, Hymenoptera) in the warm deserts of North America. Journal of Hymenoptera Research 82: 317-345. https://doi.org/10.3897/jhr.82.60895

New ant species named in recognition of gender diversity

A newly discovered miniature trap jaw ant from the evergreen tropical forests of Ecuador bears the curious Latin name Strumigenys ayersthey, among hundreds, which are also named in honour of people, but end with -ae (after females) and –i (after males). This makes the newly described ant perhaps the only species in the world to have a scientific name with the suffix –they, thus celebrating gender diversity.

A view of the head of Strumigenys ayersthey

The insect was first found by Philipp Hoenle of the Technical University of Darmstadt, Germany, during a cooperative investigation of the Reserva Río Canandé in 2018. The reserve belongs to the NGO Jocotoco, and preserves a small part of the highly threatened biodiversity hotspots called the Chocó.

Hoenle reached out to taxonomic expert Douglas Booher of Yale University. Soon, Booher responded with excitement that this species was unlike any other of the 850+ species belonging to its genus. As a result, the team described the previously unknown to science species and its remarkable trap-jaw morphology in a research paper, published in the peer-reviewed, open-access journal ZooKeys.

Curiously, it was no other but lead singer and lyricist of the American alternative rock band R.E.M. Michael Stipe that joined Booher in the writing of the etymology section for the research article. This is the part in the publication, where they honor their mutual friend, activist and artist Jeremy Ayers and explain the origin of the species name.

“In contrast to the traditional naming practices that identify individuals as one of two distinct genders, we have chosen a non-Latinized portmanteau honoring the artist Jeremy Ayers and representing people that do not identify with conventional binary gender assignments – Strumigenys ayersthey”. The ‘they’ recognizes non-binary gender identifiers in order to reflect recent evolution in English pronoun use – ‘they, them, their’ and address a more inclusive and expansive understanding of gender identification.”

A side view of Strumigenys ayersthey

Current nomenclature practice on how to name animal species after people only differentiates between male and female personal names, offering respectively the ending -ae for a woman or -i for a man.

The research team additionally propose that the -they suffix can be used for singular honorific names of non-binary identifiers.

A micro-CT scan of Strumigenys ayersthey

When asked about the choice of a name for the ant, Booher said: “Such a beautiful and rare animal was just the species to celebrate both biological and human diversity. Small changes in language have had a large impact on culture. Language is dynamic and so should be the change in naming species – a basic language of science”. 

With their choice, the team invites the scientific community to keep pace with the likes of Oxford English Dictionary, Merriam-Webster Unabridged Dictionary and HSBC Bank, who have also adapted their own institutional practices, language usage and recognition to represent gender diversity.

“The discovery of such an unusual rare ant highlights the importance of scientific exploration and conservation of the Chocó region in Ecuador, which is at the same time one of the most biodiverse and threatened areas on our planet.”

the researchers add in conclusion.

Strumigenys ayersthey can be distinguished by its predominantly smooth and shining cuticle surface and long trap-jaw mandibles, which make it unique among nearly a thousand species of its genus. The researchers haven’t been able to obtain more specimens of the species, which suggests that it’s rare. 

Original source:

Booher DB, Hoenle PO (2021) A new species group of Strumigenys (Hymenoptera, Formicidae) from Ecuador, with a description of its mandible morphology. ZooKeys 1036: 1–19. https://doi.org/10.3897/zookeys.1036.62034

Dating in a jungle: Female praying mantises jut out weird pheromone gland to attract mates

Scientists from the Ruhr-University and the Bavarian State Collection of Zoology discovered that females of a South American species protrude a Y-shaped organ on their backs to release pheromones and attract males. Found in none of the over 2,500 species of praying mantises worldwide, the behaviour is reported for the first time in the peer-reviewed scientific Journal of Orthoptera Research.

Female of Stenophylla lobivertex with protruded pheromone gland
(Photo by Christian J. Schwarz)

It isn’t only myriads of currently unknown species that await discovery in the Amazon rainforests. As a new study by German scientists at the Ruhr-University (Bochum) and the Bavarian State Collection of Zoology (Munich), published in the open-access peer-reviewed scientific Journal of Orthoptera Research, concludes, it seems that so do plenty of unusual behaviours.

“When I saw the maggot-like structures peeking out from the back of the praying mantis and then withdrew, I immediately thought of parasites that eat the animal from the inside, because that is not really uncommon in insects,”

says Frank Glaw, a reptile and amphibian expert from the Bavarian State Collection of Zoology, who discovered the unusual phenomenon.
How does the Alien Mantis (Stenophylla lobivertex) attract partners?

However, it took specialists in this particular animal group to solve the riddle. Although the experts had seen nothing like this in praying mantises before either, they pointed out that there are other species of mantises, in which mostly unfertilised females release pheromones from a gland in the same part of the body (between the 6th and 7th tergite), in order to attract mates. The Y-shaped organ, which can stretch up to 6 mm in length, is in fact an advanced pheromone gland, which the insect controls with the help of hemolymph.

“We suspect that Stenophylla lobivertex can release the pheromones with the protrusible organ more efficiently and in a more targeted manner than other praying mantises,”

says Christian J. Schwarz, entomologist at the Ruhr-University.

“This can be very important, especially for rare species with a low population density, so that males can reliably find their females.”

Stenophylla lobivertex is a very rare species and lives hidden in the Amazon rainforests. Discovered only 20 years ago, the bizarre-looking and well-camouflaged animal has only been spotted a few times, and apparently only mates at night in the darkness.

Stenophylla lobivertex is a rare praying mantis from the Amazon rainforest. Its ‘true’ face becomes apparent only at second glance
(Photo by Christian J. Schwarz)

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Publication:

Schwarz CJ, Glaw F (2021) The luring mantid: Protrusible pheromone glands in Stenophylla lobivertex (Mantodea: Acanthopidae). Journal of Orthoptera Research 30(1): 39-41. https://doi.org/10.3897/jor.30.55274

Unlocking Australia’s biodiversity, one dataset at a time

Illustration by CSIRO

Australia’s unique and highly endemic flora and fauna are threatened by rapid losses in biodiversity and ecosystem health, caused by human influence and environmental challenges. To monitor and respond to these trends, scientists and policy-makers need reliable data.

Biodiversity researchers and managers often don’t have the necessary information, or access to it, to tackle some of the greatest environmental challenges facing society, such as biodiversity loss or climate change. Data can be a powerful tool for the development of science and decision-making, which is where the Atlas of Living Australia (ALA) comes in.

ALA – Australia’s national biodiversity database – uses cutting-edge digital tools which enable  people to share, access and analyse data about local plants, animals and fungi. It brings together millions of sightings as well as environmental data like rainfall and temperature in one place to be searched and analysed. All data are made publicly available – ALA was established in line with open-access principles and uses an open-source code base.

The impressive set of databases on Australia’s biodiversity includes information on species occurrence, animal tracking, specimens, biodiversity projects, and Australia’s Natural History Collections. The ALA also manages a wide range of other data, including information on spatial layers, indigenous ecological knowledge, taxonomic profiles and biodiversity literature. Together with its partner tools, the ALA has radically enhanced ease of access to biodiversity data. A forum paper recently published with the open-access, peer-reviewed Biodiversity Data Journal details its history, current state and future directions.

Established in 2010 under the Australian Government’s National Collaborative Research Infrastructure Strategy (NCRIS) to support the research sector with trusted biodiversity data, it now delivers data and related services to more than 80,000 users every year, helping scientists, policy makers, environmental planners, industry, and the general public to work more efficiently. It also supports the international community as the Australian node of the Global Biodiversity Information Facility and the code base for the successful international Living Atlases community.

With thousands of records being added daily, the ALA currently contains nearly 95 million occurrence records of over 111,000 species, the earliest of them being from the late 1600s. Among them, 1.7 million are observation records harvested by computer algorithms, and the trend is that their share will keep growing.

An ALA staff member. Photo by CSIRO

Recognising the potential of citizen science for contributing valuable information to Australia’s biodiversity, the ALA became a member of the iNaturalist Network in 2019 and established an Australian iNaturalist node to encourage people to submit their species observations. Projects like DigiVol and BioCollect were also born from ALA’s interest in empowering citizen science.

The ALA BioCollect platform supports biodiversity-related projects by capturing both descriptive metadata and raw primary field data. BioCollect has a strong citizen science emphasis, with 524 citizen science projects that are open to involvement by anyone. The platform also provides information on projects related to ecoscience and natural resource management activities.

Hosted by the Australian Museum, DigiVol is a volunteer portal where over 6,000 public volunteers have transcribed over 800,000 specimen labels and 124,000 pages of field notes. Harnessing the power and passion of volunteers, the tool makes more information available to science by digitising specimens, images, field notes and archives from collections all over the world.

Built on a decade of partnerships with biodiversity data partners, government departments, community and citizen science organisations, the ALA provides a robust suite of services, including a range of data systems and software applications that support both the research sector and decision makers. Well regarded both domestically and internationally, it has built a national community that is working to improve the availability and accessibility of biodiversity data.

Original source:

Belbin L, Wallis E, Hobern D, Zerger A (2021) The Atlas of Living Australia: History, current state and future directions. Biodiversity Data Journal 9: e65023. https://doi.org/10.3897/BDJ.9.e65023

Acta Ichthyologica et Piscatoria signs with Pensoft and moves to ARPHA

The scholarly publisher and technology provider Pensoft welcomes the latest addition to its diverse portfolio of scholarly outlets – the open-access, peer-reviewed journal Acta Ichthyologica et Piscatoria (AIeP), which publishes research in the fields of ichthyology and fisheries.

AIeP is an international scientific journal publishing articles in any aspect of ichthyology and fisheries concerning true fishes (fin-fishes), including taxonomy, biology, morphology, anatomy, physiology, pathology, parasitology, reproduction and zoogeography. The academic outlet, which was launched in 1970, favours research based on original experimental data or experimental methods, or new analyses of already existing data. AIeP is indexed by all major indexers, including Web of Science and Scopus. The journal’s first Impact Factor was released in 2010, and currently stands at 0.629 (2019).

The first 2021 issue of the the open-access, peer-reviewed international journal Acta Ichthyologica et Piscatoria is already online on a brand-new website

In joining the Pensoft portfolio, AIeP gets a brand-new user-friendly website with improved design and access to Pensoft’s self-developed full-featured platform ARPHA, which offers an end-to-end publishing solution from submission to publication, distribution and archiving. With features, such as papers available in semantically enhanced HTML and machine-readable XML formats, automated data export to aggregators, and web-service integrations with major global indexing databases, the easy-to-use, open-access platform ensures that published research is easy to discover, access, cite and reuse by both humans and machines all over the world.

AIeP’s first issue published with Pensoft features 14 scientifically diverse open-access articles on ichthyology and fisheries covering a wide geographic scope. Some of the issue’s most interesting reads explore the eating habits of the spotted rose snapper in the Gulf of California, offer the first underwater photograph of a rare scorpionfish in Japan, and record the first ever occurrence of the pharaoh cardinal fish in Libyan waters, in what constitutes the westernmost Mediterranean area of colonization of this non-indigenous species.

Amongst the published papers there are also practical suggestions for species conservation and sustainable fisheries management – for example, an evaluation of the size of freshwater fish in Bangladeshi wetlands recommends only harvesting fishes with a total length of over 8.80 cm.

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Additional information

About ARPHA:

ARPHA is the first end-to-end, narrative- and data-integrated publishing solution that supports the full life cycle of a manuscript, from authoring to reviewing, publishing and dissemination. ARPHA provides accomplished and streamlined production workflows that can be customized according to the journal’s needs. The platform enables a variety of publishing models through a number of options for branding, production and revenue models to choose from.

About Pensoft:

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Contacts:

Wojciech Piasecki, Editor-in-Chief at AIeP

editor@aiep.pl

Lyubomir Penev, founder and CEO at Pensoft and ARPHA

l.penev@pensoft.net 

Novak Djokovic now has a tiny new snail species named after him

Do freshwater snails make good tennis players? One of them certainly has the name for it.

Enter Travunijana djokovici, a new species of aquatic snail named after famous Serbian ten­nis player Novak Djokovic.

Photo of Tavunijana djokovici, a new snail species from Montenegro named after Serbian ten­nis player Novak Djokovic. Photo by J. Grego

Slovak biospeleologist Jozef Grego and Montenegrin zoologist Vladimir Pešić of the University of Montenegro discovered the new snail in a karstic spring near Podgorica, the capital of Montenegro, during a field trip in April 2019. Their scientific article, published in the open-access, peer-reviewed journal Subterranean Biology, says they named it after Djokovic “to acknowledge his inspiring enthusiasm and energy.”

“To discover some of the world’s rarest animals that inhabit the unique underground habitats of the Dinaric karst, to reach inaccessible cave and spring habitats and for the restless work during processing of the collected material, you need Novak’s energy and enthusiasm,” the researchers explain.

T. djokovici has a milky-white shell in the shape of an elongated cone and is adapted to live in the underground habitats of the Dinaric karst. It is part of Hydrobiidae, a very diverse family of small to tiny snails – also known as mud snails – inhabiting fresh or brackish water, including caves and subterranean habitats.

The type locality where Tavunijana djokovici was found.

This is the first member of the genus Travunijana so far to be discovered in the Skadar Lake basin, and the only one found outside of the Trebišnjica river basin in Herzegovina, which points to the enigmatic distributional range of these snails across the Dinaric underground habitats. Where they came from, and how, remains a mystery.

Because of its small area of occupancy, T. djokovici  is assessed as Vulnerable, according to the IUCN Red List of Threatened Species. Subterranean ecosystems, the authors of the new species emphasise, are extremely vulnerable to human-driven environmental changes, and, being obscure, they’re often overlooked during conservation efforts.

Original source:

Grego J, Pešić V (2021) First record of stygobiotic gastropod genus Travunijana Grego & Glöer, 2019 (Mollusca, Hydrobiidae) from Montenegro. Subterranean Biology 38: 65–76. https://doi.org/10.3897/subtbiol.38.64762