Although they have not been around for long, microplastics have found their way to almost every ecosystem on the planet. They have been discovered in the soil, in rivers, in our food and bottled water, and even in the human body. Recently, a team of researchers found, for the first time, microplastics in water trapped in plant leaf axils.
The teasel Dipsacus.
Katarína Fogašová, Peter Manko, and Jozef Obona of the University of Prešov, Slovakia, initially set out to Eastern Slovakia to study the organisms living in the little water puddles forming in teasel leaf axils.
Teasels of the genus Dipsacus have characteristic opposite leaves that grow on the stem above each other in several levels. As they clasp the stem, they form cup-like structures that collect water, known as telmata.
“Teasel phytotelmata are a relatively common but overlooked aquatic microcosm with a very short-term occurrence of only 3 to 4 months.“
To their surprise, they found differently coloured fragments and fibers, some reaching 2.4 mm in length, which were identified as microplastics.
“These phytotelmata are very small and have a short lifespan,” the researchers write in their paper, which was published in the journal BioRisk. “The question is, therefore, how were they polluted with microplastics?”
Phytotelmata provided by teasel.
No other sources of contaminants were found in the studied area, so the fragments and fibers most likely came from polluted atmosphere, they suggest. Another theory is that snails may have transported them from the soil or from other plants, in or on their bodies.
“The first finding of microplastics in small short-term water reservoirs created by plants is further evidence that contamination of this kind spreads through various pathways and probably no environment on Earth is safe, which of course makes our discovery quite disheartening,” the researchers say.
“On the other hand, the results of our research of teasel phytotelmata, as a very unusual and highly specific natural environment, offer many possibilities for use in researching the spatio-temporal characteristics of the spread of microplastic pollution and its potential impact on the plants themselves, as well as organisms bound to them by ecological relations.”
They suggest that, due to their abundance and theoretical ability to capture microplastics in several ways from the environment, teasel phytotelmata could be a good indicator of microplastic presence.
“Our publication therefore not only brings the first discovery of microplastic pollution of habitats of this type, but also the first proposal of a new approach to the use of teasel phytotelmata and similar micro-ecosystems provided by plants (or artificially created), as bioindicators of the presence of microplastics in the environment, possible sources and pathways of their spread through the environment and spatio-temporal changes in microplastic contamination.”
Research article:
Fogašová K, Manko P, Oboňa J (2022) The first evidence of microplastics in plant-formed fresh-water micro-ecosystems: Dipsacus teasel phytotelmata in Slovakia contaminated with MPs. BioRisk 18: 133-143. https://doi.org/10.3897/biorisk.18.87433
Even when there is agreement on the impacts of invasive species on ecosystems, some stakeholders nevertheless deny the need for, or benefit of managing invasive species.
Guest blog post by Noelle G. Stratton, Nicholas E. Mandrak, and Nicole Klenk
Invasive species denialism (ISD) is a hot topic in recent invasion ecology discourse. Many of us are familiar with the concept of science denialism, particularly during recent discussions about climate change and the ongoing COVID-19 pandemic. Essentially, a person who exhibits science denialism is skeptical of, or refuses to believe, the scientific facts about a topic. Much of the discussion about ISD has focused on characterising it as a form of science denialism. However, while science denialism may be one form of ISD, it is not the only one.
Understanding the different forms of ISD is an important step in learning more about what drives ISD positions, and how those positions can be overcome to improve invasive species management. Recently, researchers at the University of Toronto outlined these ISD forms in a new paper in NeoBiota. While these framings are not the only ways to characterize invasive species denialism, they demonstrate that there are multiple framings to the ways that people deny the imperative to manage all invasive species as prescribed by early detection and rapid response.
So, what are the forms of ISD?
Venn diagram of the three forms of invasive species based on interviews and focus groups with invasive species community members in the Great Lakes region, including interested publics and decision-makers: 1) Invasive species denialism; 2) invasive species cynicism; and 3) invasive species nihilism. Each has different motivations and ways of talking about invasive species. Notably, all forms include an opposition to invasive species engagement or management efforts.
Invasive species denialism is the form that will typically come to mind when you picture a “science denialist”. Someone who does not believe in invasive species, or says that the existing scientific literature is all wrong, would fall within this framing. However, it is more complex than that. Invasive species practitioners also identified some of those who believed in invasive species and supported their management under this framing.
For example, folks who wanted management to happen immediately, be 100% effective, or have no risks to them or the environment whatsoever, were considered another form of denialist. This is because while these people supported invasive species management, they were still opposed to certain management efforts due to a lack of understanding of the science behind that management. Similarly, people who agree invasive species are a problem but say “this isn’t my problem, and I shouldn’t have to do anything about it” when shown evidence otherwise were also framed as denialists, as it again indicated a denial, or at least a lack of understanding of the scientific facts.
Invasive species cynicism is the form where someone may well understand what invasive species are and the science behind their management. However, they may still oppose management because they believe it will harm them in some way.
For example, someone who does not want to have to check and clean their boat to prevent an invasive species spread because it takes too much time would be categorized as an invasive species cynic. As well, someone who does not want to cooperate with management efforts because they personally like a particular invasive species and would like it to persist, despite knowing its potential for harms to the ecosystem or economy, is also an invasive species cynic. From these examples, it should be clear that this form of ISD is quite different from what we would think of as a “science denialist”. They understand the science, but it just does not motivate their beliefs or behaviour on this topic.
This research was also recently presented at the International Conference on Aquatic Invasive Species by co-author Noelle G. Stratton. Invasive species nihilism, in particular, prompted discussion both in-person and on social media.
Invasive species nihilism is the form that does not appear to take into account the science behind invasive species or their management at all. Rather, it revolves around the idea that invasive species research, management, or engagement are essentially a waste of time. The efforts were pointless and the results useless. This framing also differed from the other two forms in that the folks who expressed these beliefs often directly approached invasive species practitioners during the course of their work to inform them that their job was meaningless and to ask them why they bothered. This type of framing has the greatest potential to impact invasive species researchers and practitioners personally, and it is potentially the most difficult form of denialism to surmount during engagement and management efforts.
How can invasive species denialism impact management efforts?
ISD has the potential to hinder management efforts in a few different ways. Invasive species denialists may slow down decision-making by stalling or halting discussions with other stakeholders. In some cases, invasive species cynics have taken direct action to interfere with the implementation of policies that would aid with management efforts. Invasive species nihilism could make some stakeholders less likely to engage with managers because they have come to believe that management is pointless, and managers themselves may endure the stress of hearing that their work is not of value to people with this perspective. The effects that ISD may have on management are varied and depend largely on the type of framing of ISD being used. Similarly, the way that we respond to someone that we believe to be an invasive species denialist should be informed by the framing of ISD they are using.
“An understanding of these framings is also vital to respond to instances of ISD appropriately. Whether we are being confronted with anti-science contrarianism, environmental cynicism, or outbursts of nihilism, should inform our responses and our strategies to counter these positions.” (Stratton et al. 2022)
The framings of ISD explored in this research suggest that a diversity of interpretations of species movements, and value judgments about their impacts and the need for management, exist. This has the potential to problematize reductionist claims that all critiques of invasive species management are simply a denial of scientific facts. These results provide evidence that even when there is agreement on the impacts of invasive species on ecosystems, some stakeholders nevertheless deny the need for, or benefit of managing invasive species. This study further contributes to ongoing scholarly and practitioner conversations about the normative assumptions of invasive species biology and their implications for invasive species management and governance.
Research article:
Stratton NG, Mandrak NE, Klenk N (2022) From anti-science to environmental nihilism: the Fata Morgana of invasive species denialism. NeoBiota 75: 39-56. https://doi.org/10.3897/neobiota.75.90631
Image credits: diagram by NG Stratton; comic panels by NG Stratton, via material from Flickr (ChrisA1995, CC BY 2.0; Mike, CC BY-NC-SA 2.0; the-difference CC BY-NC-SA 2.0) and Studio Alternativi (Esetefania Quevedo).
“…the most realistic and tangible way out of the looming biodiversity crisis is to put a price tag on species and thereby a cost to actions that compromise them.”
So far, science has described more than 2 million species, and millions more await discovery. While species have value in themselves, many also deliver important ecosystem services to humanity, such as insects that pollinate our crops.
Meanwhile, as we lack a standardized system to quantify the value of different species, it is too easy to jump to the conclusion that they are practically worthless. As a result, humanity has been quick to justify actions that diminish populations and even imperil biodiversity at large.
In a study, published in the scholarly open-science journal Research Ideas and Outcomes, a team of Estonian and Swedish scientists propose to formalize the value of all species through a conceptual species ‘stock market’ (SSM). Much like the regular stock market, the SSM is to act as a unified basis for instantaneous valuation of all items in its holdings.
However, other aspects of the SSM would be starkly different from the regular stock market. Ownership, transactions, and trading will take new forms. Indeed, species have no owners, and ‘trade’ would not be about transfer of ownership rights among shareholders. Instead, the concept of ‘selling’ would comprise processes that erase species from some specific area – such as war, deforestation, or pollution.
“The SSM would be able to put a price tag on such transactions, and the price could be thought of as an invoice that the seller needs to settle in some way that benefits global biodiversity,”
explains the study’s lead author Prof. Urmas Kõljalg (University of Tartu, Estonia).
Conversely, taking some action that benefits biodiversity – as estimated through individuals of species – would be akin to buying on the species stock market. Buying, too, has a price tag on it, but this price should probably be thought of in goodwill terms. Here, ‘money’ represents an investment towards increased biodiversity.
“By rooting such actions in a unified valuation system it is hoped that goodwill actions will become increasingly difficult to dodge and dismiss,”
adds Kõljalg.
Interestingly, the SSM revolves around the notion of digital species. These are representations of described and undescribed species concluded to exist based on DNA sequences and elaborated by including all we know about their habitat, ecology, distribution, interactions with other species, and functional traits.
For the SSM to function as described, those DNA sequences and metadata need to be sourced from global scientific and societal resources, including natural history collections, sequence databases, and life science data portals. Digital species might be managed further by incorporating data records of non-sequenced individuals, notably observations, older material in collections, and data from publications.
The study proposes that the SSM is orchestrated by the international associations of taxonomists and economists.
“Non-trivial complications are foreseen when implementing the SSM in practice, but we argue that the most realistic and tangible way out of the looming biodiversity crisis is to put a price tag on species and thereby a cost to actions that compromise them,”
says Kõljalg.
“No human being will make direct monetary profit out of the SSM, and yet it’s all Earth’s inhabitants – including humans – that could benefit from its pointers.”
Original source
Kõljalg U, Nilsson RH, Jansson AT, Zirk A, Abarenkov K (2022) A price tag on species. Research Ideas and Outcomes 8: e86741. https://doi.org/10.3897/rio.8.e86741
The permanent topical article collection aims to bring together key insights into restoration of wetlands and coastal marine systems, thereby facilitating exchange among different disciplines.
The “Restoration of Wetlands” permanent topical article collection in the open-access, peer-reviewed scholarly journal Nature Conservation is now open for submissions, with the aim to bring together a wide spectrum of knowledge necessary to inform scientists, policy-makers and practitioners about key insights into restoration of wetlands and coastal marine systems, thereby facilitating exchange among different disciplines.
Being a permanent collection means that it is to welcome contributions indefinitely, whereas papers will progress to publication as soon as they are accepted by the editors. While they will be accessible from a central point: the collection, which is also assigned with its own DOI, the articles themselves will feature in different journal volumes, depending on their publication date.
Find more about the specificity of Special issues and Topical collections on the journal’s website.
The issue is managed by an international team of scientists:
Mathias Scholz, Helmholtz Centre for Environmental Research – UFZ, Germany (lead editor);
“Worldwide, the loss of biodiversity in wetlands, like rivers and their floodplains and peatland but also in deltas and estuaries is dramatic,”
the guest editors explain.
Photo by Mathias Scholz.
Due to intensive land-use, including farming, urbanisation, drainage, construction of levees or bank stabilisation or straightening of river courses and coastlines, wetlands are losing their typical functions, such as carbon storage and habitat provision. As a result, the ecosystem services they provide are declining and so is the coastal biodiversity as a whole.
However, various restoration measures have been carried out to revitalise wetlands over the last decades, on a global scale. Some of those have already proved successful, while others are still on their way to improve wetland biodiversity and related ecosystem functions and services. For all these efforts, the end goal is to implement international biodiversity actions and policies for adaptation and mitigation of climate change.
Among others, the “Restoration of Wetlands” article collection in the Nature Conservation journal seeks to attract contributions addressing issues, such as the roles of society and planning, as well as biology in restoration; indicators to monitor and measure restoration success; the synergies between wetland restoration and climate change adaptation; and hands-on expertise in restoration.
***
Find more about the “Restoration of Wetlands” collection on the Nature Conservation’s journal website.
To help implement ecosystem accounts, the One Ecosystem journal provides a platform for scientists and statisticians to publish newly compiled accounting tables.
SEEA EA is a spatially-based, integrated statistical framework for organising biophysical information about ecosystems, measuring ecosystem services, tracking changes in ecosystem extent and condition, valuing ecosystem services and assets and linking this information to measures of economic and human activity.
To help implement ecosystem accounts, the One Ecosystem journal provides a platform for scientists and statisticians to publish newly compiled accounting tables.
The “Ecosystem Accounts” permanent collection welcomes articles that describe and report ecosystem accounting tables, compiled following the standards set by the SEEA EA. The current version of the framework is fully described in United Nations et al. (2021). System of Environmental-Economic Accounting—Ecosystem Accounting (SEEA EA), available as a white cover publication, pre-edited text subject to official editing at: https://seea.un.org/ecosystem-accounting.
This collection does not accept research papers on ecosystem accounting that solely report new developments on accounting methods, such as new models for ecosystem services, new indicators for ecosystem condition or new techniques for monetary valuation of ecosystems.
The inclusion of a compiled ecosystem accounting table is mandatory for this collection. Otherwise, papers will be diverted to the regular issue of One Ecosystem. In such cases, the authors may also choose to submit their contributions to another topical collection.
Detailed instructions for authors
Submitting authors need to select One Ecosystem as a journal and “Ecosystem Accounting table” as an article template in ARPHA Writing Tool.
Submissions to this collection shall respect the following requirements:
Introduction:
The introduction makes clear reference to the type (or types) of account(s) submitted, the accounting area, and the accounting period. The introduction should contain a clear reference to the SEEA EA.
The following accounting tables can be published with data referring to a specific accounting area and for a given accounting period:
Ecosystem extent account – physical terms: Total extent of area of one or more ecosystem types
Ecosystem condition account – physical terms: (Aggregated) data on selected ecosystem characteristics and optionally the distance from a reference condition.
Ecosystem services flow account – physical terms: Physical supply of final ecosystem services by ecosystem assets and the use of those services by economic units.
Ecosystem services flow account – monetary terms: The monetary estimate of final ecosystem services by ecosystem assets and the use of those services by economic units.
Monetary ecosystem asset account – monetary terms: Stocks and changes in stocks (additions and reductions) of ecosystem assets in monetary terms.
Data and methods
This section describes which typologies or classifications have been used to classify ecosystems, ecosystem condition indicators, ecosystem services, or economic sectors. Preference should be given to different typologies proposed by SEEA EA, but deviations or other typologies are acceptable as well.
The section provides a list of all ecosystem types, variables, indicators, or economic sectors used in the accounting tables and it provides references to the data sources used to quantify them.
Optionally, papers justify the use of variables and indicators making reference to specific selection criteria.
For ecosystem service accounts, this section describes or refers to the methods used to quantify ecosystem services.
For monetary accounts, this section describes or refers to the methods used to assign monetary values to ecosystem services.
The use of supplementary materials is recommended in case the description of data and methods is too long. In that case, this section contains a summary of the data and methods.
Accounting tables and results
This section presents the accounting table(s). Ideally, this section presents the most aggregated version of the accounting table(s), while detailed versions with a high number of rows and columns can be easily published as a spreadsheet in the supplement section of the paper.
Stylised versions of accounting tables are available in the SEEA EA guidelines. A stylized example for each ecosystem accounting table is available in MS Excel. It is highly recommended to follow these examples to the maximum possible extent.
Graphs or maps that illustrate the accounting tables or that provide key results used to compile the accounting table can be published as well in this section.
Discussion
In this section, authors are invited to add at least one of the following topics:
A short interpretation of the results: are the reported data comparable to other published data on ecosystem extent, condition or services or do they deviate substantially.
Critique or comments on the SEEA EA framework. Identify issues with application of the framework. Highlight areas for improvement or further research.
Demonstration of how the accounts have been or can be used to support policy and decision making or implementation. Particular cases of interest are (however, not restricted to) agricultural, forestry, fishery and biodiversity policies, biodiversity and ecosystem monitoring and reporting, ecosystem restoration projects, demonstrating values of ecosystems, or environmental impact assessments.
***
Visit One Ecosystem’s website and the collection’s webpage.
The “Recent advancements in the risk screening of freshwater and terrestrial non-native species” Special Issue in the open-access, peer-reviewed scholarly journal NeoBiota is now open for submissions. The deadline for submission is 30 April 2022, with the issue scheduled for publication in August 2022.
The “Recent advancements in the risk screening of freshwater and terrestrial non-native species” Special Issue in the open-access, peer-reviewed scholarly journal NeoBiotais now open for submissions.
Update: The deadline for submission has been extended to 30 April 2022, with the issue expected to be published in August 2022.
The new special issue is expected to collate prominent contributors from the field of invasive ecology, thereby addressing existing gaps in the knowledge about both freshwater and terrestrial non-native species and their management.
The editors note that despite the current efforts and measures to monitor and tackle the spread of non-native species, and especially those posing imminent threat to local biodiversity and ecosystems, further expansion of such populations has increasingly been recorded in recent years. Of special concern are developing countries, where legislation for controlling non-native species is still lacking.
A major problem is that – as of today – we are still missing on risk screening studies needed to provide evidence for the invasiveness potential of many non-native species across several taxonomic groups, which would then be used to support specific conservation efforts. Unfortunately, this is particularly true for species inhabiting the world’s biodiversity hotspots, point out the editors.
Risk-based identification of non-native species is an essential process to inform policy and actions for conservation and management of biodiversity. Previously published papers on risk screening of aquatic non-native species, and especially those using the most widely-employed ‘-ISK’ decision-support toolkits, have attracted mounting interest from the wider scientific community.
“Trends in Arthropods of Alpine Aquatic Ecosystems” is the first topical collection for the journal of the Swiss Entomological Society
The open-access, peer-reviewed scholarly journal Alpine Entomology, published by Pensoft on behalf of the Swiss Entomological Society, announced its very first topical collection of articles, which will be focusing on arthropods associated with aquatic ecosystems in mountainous regions.
The journal is currently inviting scientists, working on aquatic fauna from alpine habitats, to openly publish their research articles and short notices that provide evidence how arthropods’ biogeography, species communities, distribution, behaviour and morphology have changed in recent times.
“Aquatic invertebrates are key indicators of global or local changes. Furthermore, many aquatic ecosystems are closely linked to mountains because they originate in them. Many valuable unpublished datasets on aquatic arthropod fauna may therefore be available from mountainous regions,”
The aim of the “Trends in Arthropods of Alpine Aquatic Ecosystems” collection is to bring together data and findings about what many agree is the most impacted type of environment on Earth: aquatic ecosystems, especially running waters.
The collection will remain open for submissions for the next two years. In the meantime, the accepted manuscripts will be published on a rolling basis, as soon as they are ready for publication.
The deep ocean is the last frontier on our planet. It is home to creatures beyond our imagination and filled to the brim with life. Coastal communities have known the value of a healthy ocean for centuries, yet much of its life remains unknown, sitting beyond the reach of most research programs due to the hostility of its depth and vastness. With current research and monitoring activities in the region mostly focussing on shallow reefs, our Field Identification Guide, published in the peer-reviewed, open-access Biodiversity Data Journal, aims to showcase the benthic organisms that inhabit the Seychelles’ deeper reefscapes. The research cruise that gathered the imagery data used to create the guide, Nekton’s “First Descent: Seychelles Expedition”, was the first of its kind to systematically survey deeper reefs in Seychelles waters, bringing to light previously little-known ecosystems and their inhabitants.
The deep ocean is the last frontier on our planet. It is home to creatures beyond our imagination and filled to the brim with life. Coastal communities have known the value of a healthy ocean for centuries, yet much of its life remains unknown, sitting beyond the reach of most research programs due to the hostility of its depth and vastness.
More recently, the importance of deeper ecosystems started moving into the focus of modern marine research as many scientists across the globe are now working to unriddle the mysteries and processes that drive the patterns of life down in the deep.
Deeper reef habitats, starting at ~30m depth beyond SCUBA diving limits, are of crucial importance for coastal communities and adjacent ecosystems alike. They have been found to not only support coral and fish larval supply, aiding shallower reefs, but also to act as a refuge for many species in times of disturbance. Yet, going back to the start of this post – you cannot protect what you don’t know – and we currently know very little about these deeper reefs, especially ones in the Western Indian Ocean region.
We are many nations, but together we are one ocean.
With current research and monitoring activities in the region mostly focussing on shallow reefs, our Field Identification Guide, published in the peer-reviewed, open-access Biodiversity Data Journal, aims to showcase the benthic organisms that inhabit the Seychelles’ deeper reefscapes. The research cruise that gathered the imagery data used to create the guide, Nekton’s “First Descent: Seychelles Expedition”, was the first of its kind to systematically survey deeper reefs in Seychelles waters, bringing to light previously little-known ecosystems and their inhabitants.
All species play relevant roles in trophic relations, in the functioning of ecosystems, and all have a potential biotechnological interest.
Our Field Identification Guide is one of the first efforts to describe the mesophotic and sub-mesophotic reefs in the Western Indian Ocean. To effectively protect these ecosystems, stakeholders need to be able to visualise them and scientists need to be able to identify and classify the organisms they observe. Displaying the diversity of the benthic organisms we encountered is only the first step in a complex and long process, allowing us to categorize, study, monitor and thus effectively protect these habitats.
The correct identification of life is a fundamental building block of ecological knowledge. This international collaboration provided an important place to start from when considering the life on deeper reefs in Seychelles and the wider Western Indian Ocean region.
To survey the benthic flora and fauna of the Seychelles, we used a variety of methods, including submersibles, remotely operated vehicles and SCUBA diving teams equipped with stereo-video camera systems. We then recorded benthic communities during transect surveys conducted at 10 m, 30 m, 60 m, 120 m, 250 m and 350 m depths. This way, we ended up with 45 h of video footage and enough images to be able to present a photographic guide for the visual identification of the marine macrophytes, corals, sponges and other common invertebrates that inhabit Seychelles’ reefs.
We encountered coral fan gardens on steep slopes, boulders entirely encrusted with sponges of all colours and textures, corals of all shapes and sizes, and an amazing variety of critters. The images in our guide cannot do justice to the beauty of these habitats, and more than one tear was shed encountering these intact ecosystems teeming with life. Especially in times of increasingly frequent disturbance events and quickly shifting baselines (i.e., what we would see as a pristine, healthy reef in the 21st century), intact reef systems become increasingly rare. So much so that they are often confined to extremely remote and/or long and heavily protected areas. Finding these deeper reefs intact and with little to no signs of anthropogenic disturbance means hope – hope that there are yet undiscovered and unexplored reefs in the Western Indian Ocean region that show similar traits; and hope that we will discover even more novel habitats worth protecting.
We hope that this guide will help the public to discover the beauty of Seychelles’ deeper reefs and aid current and future monitoring and research activities in Seychelles and the Western Indian Ocean region.
Currently, there are few formalised training materials available to new marine researchers working in mesophotic and deeper reef habitats, especially for the Indian Ocean. The present benthic field ID guide will hopefully be of use to marine researchers, managers, divers and naturalists with the identification of organisms as seen in marine imagery or live in the field.
Paris Stefanoudis – University of Oxford, and Nekton
Taxonomic paper:
Fassbender N, Stefanoudis PV, Filander ZN, Gendron G, Mah CL, Mattio L, Mortimer JA, Moura CJ, Samaai T, Samimi-Namin K, Wagner D, Walton R, Woodall LC (2021) Reef benthos of Seychelles – A field guide. Biodiversity Data Journal 9: e65970. https://doi.org/10.3897/BDJ.9.e65970
Revolutionary environmental DNA analysis holds great potential for the future of biodiversity monitoring, concludes a new study
Collection of water samples for eDNA metabarcoding bioassessment. Photo by Till-Hendrik Macher.
In times of exacerbating biodiversity loss, reliable data on species occurrence are essential, in order for prompt and adequate conservation actions to be initiated. This is especially true for freshwater ecosystems, which are particularly vulnerable and threatened by anthropogenic impacts. Their ecological status has already been highlighted as a top priority by multiple national and international directives, such as the European Water Framework Directive.
However, traditional monitoring methods, such as electrofishing, trapping methods, or observation-based assessments, which are the current status-quo in fish monitoring, are often time- and cost-consuming. As a result, over the last decade, scientists progressively agree that we need a more comprehensive and holistic method to assess freshwater biodiversity.
Meanwhile, recent studies have continuously been demonstrating that eDNA metabarcoding analyses, where DNA traces found in the water are used to identify what organisms live there, is an efficient method to capture aquatic biodiversity in a fast, reliable, non-invasive and relatively low-cost manner. In such metabarcoding studies, scientists sample, collect and sequence DNA, so that they can compare it with existing databases and identify the source organisms.
Furthermore, as eDNA metabarcoding assessments use samples from water, often streams, located at the lowest point, one such sample usually contains not only traces of specimens that come into direct contact with water, for example, by swimming or drinking, but also collects traces of terrestrial species indirectly via rainfalls, snowmelt, groundwaters etc.
In standard fish eDNA metabarcoding assessments, these ‘bycatch data’ are typically left aside. Yet, from a viewpoint of a more holistic biodiversity monitoring, they hold immense potential to also detect the presence of terrestrial and semi-terrestrial species in the catchment.
In their new study, reported in the open-access scholarly journalMetabarcoding and Metagenomics, German researchers from the University of Duisburg-Essen and the German Environment Agency successfully detected an astonishing quantity of the local mammals and birds native to the Saxony-Anhalt state by collecting as much as 18 litres of water from across a two-kilometre stretch along the river Mulde.
After water filtration the eDNA filter is preserved in ethanol until further processing in the lab. Photo by Till-Hendrik Macher.
In fact, it took only one day for the team, led by Till-Hendrik Macher, PhD student in the German Federal Environmental Agency-funded GeDNA project, to collect the samples. Using metabarcoding to analyse the DNA from the samples, the researchers identified as much as 50% of the fishes, 22% of the mammal species, and 7.4% of the breeding bird species in the region.
However, the team also concluded that while it would normally take only 10 litres of water to assess the aquatic and semi-terrestrial fauna, terrestrial species required significantly more sampling.
Unlocking data from the increasingly available fish eDNA metabarcoding information enables synergies among terrestrial and aquatic biodiversity monitoring programs, adding further important information on species diversity in space and time.
“We thus encourage to exploit fish eDNA metabarcoding biodiversity monitoring data to inform other conservation programs,”
says lead author Till-Hendrik Macher.
“For that purpose, however, it is essential that eDNA data is jointly stored and accessible for different biodiversity monitoring and biodiversity assessment campaigns, either at state, federal, or international level,”
concludes Florian Leese, who coordinates the project.
Original source:
Macher T-H, Schütz R, Arle J, Beermann AJ, Koschorreck J, Leese F (2021) Beyond fish eDNA metabarcoding: Field replicates disproportionately improve the detection of stream associated vertebrate species. Metabarcoding and Metagenomics 5: e66557. https://doi.org/10.3897/mbmg.5.66557
The recognition of the “Ceguaca, la Mujer de los Juncos” locality comes as a result of research work – published last year in Subterranean Biology – which produced the first checklist of bats for Santa Bárbara
Guest blog post by Eduardo Javier Ordoñez-Trejo and Manfredo Alejandro Turcios-Casco
Bat populations are threatened due to fragmentation and loss of their habitats. Meanwhile, dry forests are some of the least studied and most threatened ecosystems in Honduras, and similarly, so have been the caves.
We had to walk at least two hours to reach either of the caves in El Peñon or Quita Sueño, so we would take our full equipment: for camping, cooking and studying bats. Photo by Hefer Ávila
Caves are important reservoirs of species, as they offer perks no other habitat can provide at once: a refuge from predators, inconstant weather, and a critical venue for social interactions, reproduction, hibernation, roosting and nutrients. In order to protect bat populations, the Latin American and Caribbean Web for Bat Conservation (RELCOM) supports the establishment of Areas of Importance for the Conservation of Bats, abbreviated as AICOMS (Spanish for Areas with Importance for the Conservation of Bats) .
It was at least a two-hour walk between the caves of Monte Grueso and the caves of El Peñon. The final stint, though, included a swim across Rio Ulúa, one of most extensive rivers in Honduras. Photo by Hefer Ávila
Together with biologists of the National Autonomous University of Honduras (UNAH) and local community members, we provided the first ever checklist of bat species in the Dry Forest of Ceguaca, Santa Barbara (Honduras), and described the importance of two caves in the area for bat conservation based on species richness. We published this study last June in Subterranean Biology.
The study is openly accessible in Subterranean Biology
We found that caves in Ceguaca are inhabited by at least 23 bat species of four families, which represents approximately a fifth of all species known from Honduras. Their inhabitants include several threatened species like the hairy-legged vampire bat (Diphylla ecaudata), one of the three existing vampire bats, and rare species with few official records in the area, such as Schmidts’s big-eared bat (Micronycteris schmidtorum). These caves may also represent a critical site for roosting and nursing. During our study, we managed to record pregnant and lactating females of several species, as well as reproductive males.
The certificate issued by RELCOM recognising the caves in Ceguaca as an Area of Importance for the Conservation of Bats, dated 6th March 2020
“It feels wonderful to see that our work has had great results and that with our efforts, we established an area where bats will be protected and studied. This certification also includes the name of Roberto Castellano, an elder member of the community of Ceguaca, who helped us during the fieldwork as our guide. He was a great conservationist of this area and protector of the caves. Unfortunately, he passed away during the study, however, due to his enormous contribution, we dedicated our article to him and included him as part of this AICOM success.”
José Alejandro Soler Orellana, co-author of the study.
Using what we learned in Ceguaca’s caves, we approached the Program for Bat Conservation of Honduras (PCMH) and showed them the evidence the locality was indeed a precious place with a spectacular bat diversity. Consequently, thanks to our collaboration with the PCMH, the site was effectively declared as an Area of Importance for the Conservation of Bats by RELCOM on 6th March 2020.
This is an enormous step for bat conservation in the country. Bat conservation efforts should focus on studying and protecting these and other important habitats. We also need to make sure that local people appreciate the important role the bats play in the ecosystem.
We captured this adult Pallas’s long-tongued bat (Glossophaga soricina) female in a cave in Monte Grueso. She must have been returning to the cave after spending the day pollinating local plants. During these surveys, we found trees with opened flowers of Mexican calabash (Crescentia alata). Photo by Hefer Ávila
***
Research article:
Turcios-Casco MA, Mazier DIO, Orellana JAS, Ávila-Palma HD, Trejo EJO (2019) Two caves in western Honduras are important for bat conservation: first checklist of bats in Santa Bárbara. Subterranean Biology 30: 41–55. https://doi.org/10.3897/subtbiol.30.35420
