agriculture

Promoting sustainable agriculture for pollinators: Pensoft joins the EU project AGRI4POL

The new Horizon project is to assist the transition of agriculture to a positive force for biodiversity, crop pollination services, ecosystems and people. Pensoft will lead the communication, dissemination, exploitation and synergies with other projects.

Threats to pollinators and pollination services that support agriculture and provide benefits to people are a worldwide problem, recognized by intergovernmental scientific assessments, national or transnational initiatives as well as policies.

Intensive agriculture is among the principal threats to pollinator biodiversity and the crop pollination services that pollinators provide. Moreover, typically crop breeding has tended to overlook the benefits of pollination for sustained crop yields in favour of other crop traits.

Coordinated by Dr. Adam Vanbergen (INRAE) and funded by Horizon Europe, the AGRI4POL project takes an ambitious and achievable interdisciplinary and transdisciplinary approach to achieve a transition towards sustainable pollinator-friendly farming.

*AGRI4POL kick-off meeting (February 2025, Brussels, Belgium).*

The project aims to deliver an integrated state-of-the-art analysis of the crop – farming system – pollinator interplay across levels of biological organisation from the crop gene to the agroecosystem.

AGRI4POL launched in January 2025 and will be running until the end of 2028.

To achieve its goals, AGRI4POL project has outlined six objectives:

Establish and work with a multi-actor community to drive the transition towards more pollinator friendly farming systems and value chains.
Evaluate genetic diversity of crop floral traits governing pollinator interactions to stimulate breeding of pollinator-smart varieties.
Find out how pollinator-crop relationships are modified by intra- and interspecific crop diversification in space and time.
Optimise ecological infrastructures (EI = landscape features, non-crop habitats) for crop pollination, pollinator biodiversity and multiple ecosystem benefits.
Assess the social, economic and environmental opportunities and obstacles presented by pollinator friendly farming options to understand their feasibility and acceptability.
Evaluate the influence of the policy landscape and the practitioner awareness of the benefits and challenges of pollinator-friendly farming at [sub]national, European and international scales.

*AGRI4POL’s coordinator Dr. Adam Vanbergen (INRAE) gave an introductory presentation during the project kick-off meeting in Brussels (February 2025, Belgium).*

Pensoft’s role

Building on its experience in communication, dissemination, and exploitation of results, Pensoft will focus on maximizing the project’s impact and long-term legacy. This encompasses a wide array of activities, ranging all the way from building a project’s visual identity and online presence and creating a podcast to translating results into policy recommendations. Moreover, Pensoft will be facilitating collaboration opportunities with other projects, leveraging on its involvement in numerous EU-funded projects. As of now, Pensoft takes part in six EU Pollinator projects, which serves well to facilitate synergies.

International consortium

The AGRI4POL consortium comprises partners from fourteen European institutions along with five associated partners, including China. Consortium covers a wide diverse range of scientific disciplines spanning from pollinator ecology and agriculture to stakeholder engagement and communications.

INREA (France)
INRAE Transfert (France)
Helmholtz Centre for Environmental Research – UFZ (Germany)
The University of Reading (United Kingdom)
Wageningen University and Research (Netherlands)
Lund University (Sweden)
Consejo Superior de Investigaciones Científicas (CSIC) (Spain)
Albert-Ludwigs-Universität Freiburg (Germany)
Pensoft Publishers (Bulgaria)
Global Change Research Institute – Ustav Vyzkumu Globalni Zmeny Av Cr Vvi (CzechGlobe) (Czech Republic)
Université de Mons (Belgium)
University of Ljubljana – Univerza v Ljubljani (Slovenia)
Università degli Studi di Padova (Italy)
WCMC LBG – UNEP World Conservation Monitoring Centre (global)
Associació Paisatages Vius – Living Landscapes (global)
Maisadour Semences Romania SRL – MAS Seeds (Romania)
Confederazione Italiana Agricoltori (Italy)
Eidgenoessisches Departement fuer Wirtschaft, Bildung und Forschung (WBF-Agroscope) (Italy)
Swiss Association for the Development of Agriculture and Rural Areas (Switzerland)
Institute of Apicultural Research – Chinese Academy of Agricultural Sciences
China West Normal University
Gansu Agriculture University

The AGRI4POL project website is coming soon!

In the meantime, follow the project’s progress via its social media channels on BlueSky and LinkedIn.

Moving towards a systems-based Environmental Risk Assessment for wild bees, butterflies, moths and hoverflies: Pensoft joins PollinERA

Pensoft will lead the communication, dissemination and exploitation activities of the Horizon Europe project, which aims to reverse pollinator population declines and reduce impacts of pesticides.

The European Green Deal, the EU biodiversity strategy, the EU zero pollution action plan, and the revised EU pollinators initiative all indicate the need to protect pollinators and address insect and pollinator declines.

Plant protection products (PPP), also known as pesticides, have been identified as one of the primary triggers of pollinator decline. However, significant knowledge gaps and critical procedural limitations to current pesticide risk assessment require attention before meaningful improvements can be realised. The functional group is currently represented by only one species, the honey bee, which does not necessarily share other species’ biological and ecological traits.

Coordinated by The Social-Ecological Systems Simulation (SESS) Centre, Aarhus University and Prof. Christopher J. Topping, PollinERA (Understanding pesticide-Pollinator interactions to support EU Environmental Risk Assessment and policy) aims to move the evaluation of the risk and impacts of pesticides and suggestions for mitigation beyond the current situation of assessing single pesticides in isolation on honey bees to an ecologically consistent assessment of effects on insect pollinators.

This will be achieved through the development of a new systems-based environmental risk assessment (ERA) scheme, tools and protocols for a broad range of toxicological testing, feeding to in silico models (QSARS, toxicokinetic/toxicodynamic, and ALMaSS agent-based population simulations).

Using a strong stakeholder co-development approach, these models will be combined in a One System framework for risk assessment and policy evaluation including an international long-term monitoring scheme for pollinators and pesticides.

The One System framework builds on the recent roadmap for action on the ERA of chemicals for insect pollinators, developed within the IPol‐ERA project, funded by the European Food Safety Authority (EFSA). The framework will expand the ERA tools currently used for honey bees to include wild bees, butterflies, moths and hoverflies.

With an overall goal of reversing pollinator population declines and reducing the harmful impacts of pesticides, for the next four years, PollinERA will follow four specific objectives:

Fill ecotoxicological data gaps to enable realistic prediction of the source and routes of exposure and the impact of pesticides on pollinators and their sensitivity to individual pesticides and mixtures.
Develop and test a co-monitoring scheme for pesticides and pollinators across European cropping systems and landscapes, developing risk indicators and exposure information.
Develop models for predicting pesticide toxicological effects on pollinators for chemicals and organisms, improve toxicokinetic/toxicodynamic (TKTD) and population models, and predict environment fate.
Develop a population-level systems-based approach to risk and policy assessment considering multiple stressors and long-term spatiotemporal dynamics at a landscape scale and generate an open database for pollinator/pesticide data and tools.

Between 17 and 18 January 2024, experts from various realms of knowledge – from pollinator ecology, pesticide exposure and toxicological testing, to stakeholder engagement and communications – gathered in Aarhus, Denmark, to officially launch PollinERA. The two-day event seeded fruitful discussions on the project’s specific objectives, mission, methodology, outcomes and expected results.

With more than 20 years of experience in science communication, Pensoft is leading Work Package 6: Communication, Dissemination and Exploitation, that will ensure the effective outreach of PollinERA to its multiple target audiences. Based on the tailor-made communication, dissemination, exploitation and engagement strategies, Pensoft will provide a recognisable visual identity of the project, along with a user-friendly website, social media profiles, promotional materials, newsletters, infographics and videos. Pensoft will also contribute to the stakeholder mapping process and the organisation of various workshops and events.

To support the proactive, open-science transfer of results and scientific achievements, two PollinERA topical collections of articles will be established in Pensoft’s Food and Ecological Systems Modelling Journal (FESMJ) and the Research Ideas and Outcomes (RIO) journal.

PollinERA’s coordinator Prof. Christopher J. Topping (The Social-Ecological Systems Simulation Centre, Aarhus University) gave a warm welcome during the kick-off meeting of the project in Aarhus, Denmark.

In a joint effort to maximise impact and ensure sustainability of results, PollinERA will unfold in close collaboration with the sister Horizon Europe-funded project WildPosh, where Pensoft is also leading the Communication, dissemination and exploitation work package.

Coordinated by Prof. Denis Michez (University of Mons), WildPosh aims to significantly improve the evaluation of risk to pesticide exposure of wild pollinators, and enhance the sustainable health of pollinators and pollination services in Europe.

Collaboration mechanisms between the PollinERA and the WildPosh projects include joint communication activities and events, joint data management strategy and alignment of activities to solidify the quality of final outputs.

Prof. Denis Michez (University of Mons), the coordinator of PollinERA’s sister-project WildPosh, presented the missions, objectives and methods, as well as the similarities, differences and collaboration potential between the two projects at PollinERA’s kick-off meeting in Aarhus, Denmark.

“It is fantastic that the European Commission puts so much effort into preserving wild pollinators and the countless benefits they bring to our society! The One System framework will hopefully become a fundamental part for the environmental risk assessment of chemicals for insect pollinators. I am really looking forward to implementing this insightful project, in close collaboration with its sister project WildPosh, where Pensoft is leading the dissemination efforts as well.”
says Teodor Metodiev, Principal Investigator for Pensoft at both PollinERA and WildPosh.

The PollinERA consortium comprises partners from eight European countries that represent a diverse range of scientific disciplines spanning from pollinator ecology, pesticide exposure and toxicological testing, to stakeholder engagement and communications.

Consortium:

Stay up to date with the PollinERA project’s progress on X/Twitter (@pollinERA_eu) and LinkedIn (/pollinera-eu).

Assessment, monitoring, and mitigation of chemical stressors on the health of wild pollinators: Pensoft joins WildPosh

Assessment, monitoring, and mitigation of chemical stressors on the health of wild pollinators: Pensoft joins WildPosh

Pensoft is amongst the participants of a new Horizon Europe project aiming to better evaluate the risk to wild pollinators of pesticide exposure, enhancing their health & pollination services.

Wild fauna and flora are facing variable and challenging environmental disturbances. One of the animal groups that is most impacted by these disturbances are pollinators, which face multiple threats, driven to a huge extent by the spread of anthropogenic chemicals, such as pesticides.

WildPosh (Pan-european assessment, monitoring, and mitigation of chemical stressors on the health of wild pollinators) is a multi-actor, transdisciplinary project whose overarching mission and ambition are to significantly improve the evaluation of the risk to wild pollinators of pesticide exposure, and enhance the sustainable health of pollinators and pollination services in Europe.

On 25 and 26 January 2024, project partners from across Europe met for the first time in Mons, Belgium and marked the beginning of the 4-year endeavour that is WildPosh. During the two days of the meeting, the partners had the chance to discuss objectives and strategies and plan their work ahead.

This aligns with the objectives of the European Green Deal and EU biodiversity strategy for 2030, emphasising the need to reduce pollution and safeguard pollinators. WildPosh focuses on understanding the routes of chemical exposure, evaluating toxicological effects, and developing preventive measures. By addressing knowledge gaps in pesticide risk assessment for wild pollinators, the project contributes to broader efforts in biodiversity conservation.

During the kick-off meeting in Mons, WildPosh’s project coordinator Prof. Denis Michez (University of Mons, Belgium) gave an introductory presentation.

As a leader of Work Package #7: “Communication, knowledge exchange and impact”, Pensoft is dedicated to maximising the project’s impact by employing a mix of channels in order to inform stakeholders about the results from WildPosh and raise further public awareness of wild and managed bees’ health.

Pensoft is also tasked with creating and maintaining a clear and recognisable project brand, promotional materials, website, social network profiles, internal communication platform, and online libraries. Another key responsibility is the development, implementation and regular updates of the project’s communication, dissemination and exploitation plans, that WildPosh is set to follow for the next four years.

“It is very exciting to build on the recently concluded PoshBee project, which set out to provide a holistic understanding of how chemicals affect health in honey bees, bumble bees, and solitary bees, and reveal how stressors interact to threaten bee health. WildPosh will continue this insightful work by investigating these effects on wild pollinators, such as butterflies, hoverflies and wild bee species, with the ultimate goal of protecting these small heroes who benefit the well-being of our planet,”
says Teodor Metodiev, WildPosh Principal Investigator for Pensoft.

For the next four years, WildPosh will be working towards five core objectives:

1) Determine the real-world agrochemical exposure profile of wild pollinators at landscape level within and among sites

2) Characterise causal relationships between pesticides and pollinator health

3) Build open database on pollinator traits/distribution and chemicals to define exposure and toxicity scenario

4) Propose new tools for risk assessment on wild pollinators

5) Drive policy and practice.

Consortium:

The consortium consists of 17 partners coming from 10 European countries. Together, they bring extensive experience in Research and Innovation projects conducted within the Horizon programmes, as well as excellent scientific knowledge of chemistry, modelling, nutritional ecology, proteomics, environmental chemistry and nutritional biology.

Visit can follow WildPosh on X/Twitter (@WildPoshProject), Instagram (/wildposhproject) and Linkedin (/wildposh-eu)

Cultivated and wild bananas in northern Viet Nam threatened by а devastating fungal disease

For over 100 years, Fusarium, one of the most important fungal plant pathogens, has affected banana production worldwide.

Fusarium is one of the most important fungal plant pathogens, affecting the cultivation of a wide range of crops. All over the world, thousands of farmers suffer agricultural losses caused by Fusarium oxysporum f. sp. cubense (referred to as Foc for short), which directly affects their income, subsistence, and nourishment.

As a soil-borne fungus, Foc invades the root system, from where it moves into the vascular tissue that gradually deteriorates, until eventually the plant dies. What makes it particularly hard to deal with is that, even 20 years after all infected plants and tissue are removed, spores of it still remain in the soil.

One industry significantly affected by Foc is global banana export, largely dependent on the cultivation of members of the Cavendish subgroup, which are highly susceptible to some of the Foc strains.

For over 100 years, the fungus has affected banana production worldwide. Researchers predict it will continue spreading intensively in Asia, affecting important banana-producing countries such as China, the Philippines, Pakistan, and Viet Nam.

For Viet Nam, predictions on the impact of Foc for the future are dramatic: an estimated loss in the banana production area of 8% within the next five years, and up to 71% within the next 25 years. In particular, the recent rise of the novel TR4 strain has resulted in worldwide anxiety about the future of the well-known Cavendish banana and many other cultivars. Fusarium oxysporum f. sp. cubense is, however, not limited to TR4 or other well-known strains, like Race 1 or Race 2; it is a species complex that plant pathologists are yet to fully disentangle.

In Viet Nam, like in the rest of Asia, Africa, Latin America, and the Caribbean, most bananas are consumed and traded locally, supporting rural livelihood. This means that any reduction in crop harvest directly affects local people’s income and nourishment.

It has thus become necessary to find out what are the individual species causing the Fusarium wilt among Vietnamese bananas. Only by understanding which species are infecting the cultivated bananas can concrete measures be taken to control the future spreading of the disease to other regions.

Using DNA analyses and morphological characterization, an international team of researchers from Viet Nam (Plant Resources Center, Vietnam National University of Agriculture), Belgium (Meise Botanic Garden, KU Leuven, Bioversity Leuven, MUCL) and the Netherlands (Naturalis Biodiversity Center) investigated the identity of the Fusarium wilt infections. They recently published their joint research in the open-access, peer-reviewed journal MycoKeys.

The study shows that approximately 3 out of 4 Fusarium infections of the northern Vietnamese bananas are caused by the species F. tardichlamydosporum, which can be regarded as the typical Race 1 infections. Interestingly, Foc TR4 is not yet a dominant strain in northern Viet Nam, as the species causing the disease – F. odoratissimum – only accounts for 10% of the Fusarium infections. A similar proportion of Fusarium infections is caused by the species Fusarium cugenangense – considered to cause Race 2 infections among bananas.More importantly, Fusarium wilt was not only found in cultivated bananas: the disease seemed to also affect wild bananas. This finding indicates that wild bananas might function as a sink for Fusarium wilt from where reinfections towards cultivars could take place.

Research article:

Le Thi L, Mertens A, Vu DT, Vu TD, Anh Minh PL, Duc HN, de Backer S, Swennen R, Vandelook F, Panis B, Amalfi M, Decock C, Gomes SIF, Merckx VSFT, Janssens SB (2022) Diversity of Fusarium associated banana wilt in northern Viet Nam. MycoKeys 87: 53-76. https://doi.org/10.3897/mycokeys.87.72941

New pathogen threatens fennel yield in Italy

A new fungal genus and species Ochraceocephala foeniculi causes fennel yield losses of about 20-30% for three different cultivars. It damages the crops with necrotic lesions on the crown, root and stem.
International research group makes the first step in handling the new fennel disease by publishing their paper in the open-access journal Mycokeys.

A new fennel fungal disease caused by a new genus and species – Ochraceocephala foeniculi, was observed for the first time in 2017 on 5% of the “Apollo” fennel cultivar grown in the sampled localities in Catania province, Italy. Now, it has spread to 2 more cultivars: “Narciso” and “Pompeo”, causing crop losses of around 20-30%. The new pathogen damages the fennel with necrotic lesions on the crown, root and stem.

Fennel, a crop native in arid and semi-arid regions of southern Europe and the Mediterranean area is massively used as a vegetable, herb and seed spice in food, pharmaceutical, cosmetic and healthcare industries with Italy taking the world-leading production. It is an important and widely cultivated crop in Sicily (southern Italy).

Symptoms caused by Ochraceocephala foeniculi on fennel plants
Credits: Dalia Aiello
License: CC-BY 4.0

Worldwide, fennel crops are affected by several fungal diseases. In Italy, amongst soilborne diseases, there have been reports of brown rot and wilt caused by Phytophthora megasperma and crown rot caused by Didymella glomerata.

International research group, led by Ms. Dalia Aiello from the University of Catania, made the first step in handling the new fennel disease by identifying the causal agent obtained from symptomatic plants and publishing the results of their research in the open-access journal Mycokeys.

In order to understand the origin of the causal agent, scientists collected 30 samples during several surveys in the affected areas in Sicily, and studied the consistently grown fungal colonies from symptomatic tissues.

“The fungal species obtained from symptomatic tissues was identified based on morphological characters and molecular phylogenetic analyses of an ITS-LSU-SSU rDNA matrix, resulting in the description of the fennel pathogen as a new genus and species, Ochraceocephala
foeniculi,”
shares Dr. Dalia Aiello.

According to the pathogenicity tests, O. foeniculi causes symptoms on artificially inoculated plants of the same cultivar. Preliminary evaluation of fennel germplasm, according to the susceptibility to the new disease, shows that some cultivars (“Narciso”, “Apollo” and “Pompeo”) are more susceptible and some are less susceptible (“Aurelio”, “Archimede” and “Pegaso”), but this is a subject yet to be confirmed by additional investigations. More studies are required in order to plan further effective disease management strategies.

Holotype of Ochraceocephala foeniculi
Credits: Mr. Hermann Voglmayr
License: CC-BY 4.0

“On the basis of the disease incidence and severity observed in the field, we believe that this disease represents a serious threat to fennel crop in Sicily and may become a major problem also to other areas of fennel production if accidentally introduced,”
concludes Dr. Dalia Aiello.

***

Original source: Aiello D, Vitale A, Polizzi G, Voglmayr H (2020) Ochraceocephala foeniculi gen. et sp. nov., a new pathogen causing crown rot of fennel in Italy. MycoKeys 66: 1-22. https://doi.org/10.3897/mycokeys.66.48389

Viticulture Data Journal: Non-conventional papers foster Open Science & sustainability

Non-conventional, yet pivotal research results: data, models, methods, software, data analytics pipelines and visualisation methods, related to the field of viticulture, find a place in a newly launched, open-access and peer-reviewed Viticulture Data Journal.

The publishing venue is one of the fruits borne during the collaboration between scholarly publisher and technology provider Pensoft, its self-developed ARPHA Platform and the EU project AGINFRA+, whose mission is to provide a sustainable channel and data infrastructure for the use of cooperating, but not fully connected user communities working within the agricultural and food sciences.

The novel journal brings together a wide range of topics related to the field of viticulture: from genetic research, food safety of viticultural products to climate change adaptation of grapevine varieties through grape specific research. Amongst these are:

Phenotyping and genotyping
Vine growth and development
Vine ecophysiology
Berry yield and composition
Genetic resources and breeding
Vine adaptation to climate change, abiotic and biotic stress
Vine propagation
Rootstock and clonal evaluation
Effects of field practices (pruning, fertilization etc.) on vine growth and quality
Sustainable viticulture and environmental impact
Ampelography
Plant pathology, diseases and pests of grapevine
Microbiology and microbiological risk assessment
Food safety related to table grapes, raisins, wine, etc.

With the help of the ARPHA Platform’s signature writing tool, authors are able to use a set of pre-defined, yet flexible manuscript templates: Data Paper, Methods, Emerging Techniques, Applied Study, Software Description, R Package and Commentary. Furthermore, thanks to the advanced collaborative virtual environment provided by the tool, authors, but also reviewers, editors and other invited contributors enjoy the convenience of working within the same consolidated online file all the way from the authoring and peer review stages to copy editing and publication.

“The Viticulture Data Journal was created to respond to the major technological and sociological changes that have influenced the entire process of scholarly communication towards Open Science,”
explain the editors.

“The act of scientific publishing is actually the moment when the long effort of researchers comes to light and can be assessed and used by other researchers and the wider public. Therefore, it is little wonder that the main arena of transition from Open Access to Open Science was actually the field of academic publishing,”
they add.

***

The first research publication made available in VDJ is a data paper by the research team from Agricultural University of Athens: Dr Katerina Biniari, Ioannis Daskalakis, Despoina Bouza and Dr Maritina Stavrakaki. In their study, they assess and compare both the qualitative and quantitative characters of the grape cultivars ‘Mavrodafni’ and ‘Renio’, grown in different regions of the Protected Designation of Origin Mavrodafni Patras (Greece). The associated dataset, containing the mechanical properties, the polyphenolic content and the antioxidant capacity of skin extracts and must of berries of the two cultivars, is available to download as supplementary material from the article.

***

During the AGINFRA+ project, ARPHA has been extended to be used from the AGINFRA+ Virtual Research Environment (VRE), which would allow the authors to use the VRE as an additional gate to the AWT and the journal, as well as to benefit from the integration of AWT with several other services offered by the AGINFRA+ platform. The AGINFRA+ platform has been designed as a Gateway providing online access through a one-stop endpoint to services, aiming at the integration of the traditional narrative of research articles with their underlying data, software code and workflows.

***

Viticulture Data Journal is indexed by Altmetric, CrossRef, Dimensions, EBSCOhost, Google Scholar, Mendeley, Microsoft Academic, Naviga (Suweco), OCLC WorldCat, OpenAIRE, OpenCitations, ReadCube, Ulrichsweb™, Unpaywall; and archived at CLOCKSS and Zenodo

***

Follow Viticulture Data Journal on Twitter and Facebook.

New improvements to how impacts of non-native species are assessed recommended

*A farmer sets a pheromone trap to fight tomato leaf miner. Photo by CABI.*

The Centre for Agriculture and Bioscience International (CABI) has led an international team of non-native species (NNS) specialists who have compiled a list of recommendations to improve the way in which the impact of a range of invasive pests – such as the tomato leaf miner Tuta absoluta – are assessed, potentially helping towards ensuring greater global food security.

Lead authors Dr Pablo González-Moreno and Dr Marc Kenis, Senior Researchers at CABI are two of 89 NNS experts from around the world who have collaborated on the paper, published in NeoBiota, that calls for ‘more robust and user-friendly’ impact assessment protocols to predict the impacts of new or likely invaders as well as to assess the actual impact of established species.

The manuscript is the outcome of an enormous collective effort using 11 different protocols to assess the potential impact of 57 NNS to Europe yielding a total of 2614 separate assessments. This unique dataset has allowed the authors to identify which are the main factors increasing the robustness of protocols and provide recommendations on how the robustness and applicability of protocols could be enhanced for assessing NNS impacts.

As reported in the study, entitled ‘Consistency of impact assessment protocols for Non-Native Species’, Dr González-Moreno and fellow scientists – from 80 institutions including the UK-based Centre for Ecology & Hydrology (CEH), University of Milan, University of Bern and Queens University Belfast – argue that ‘assessment of the realised or potential impacts of NNS is particularly important for the prioritization of management actions.’

Millions of the world’s most vulnerable people face problems with invasive weeds, insects and plant diseases, which are out of control and have a major impact on global prosperity, communities and the environment. Developing countries are disproportionately affected.

The global cost of the world’s 1.2 million invasive species is estimated at $1.4 trillion per year – close to 5 percent of global gross domestic product. In East Africa, five major invasive species alone cause $1 billion in economic losses to smallholder farmers each year.

The scientists believe that, currently, the large variety of metrics adopted to measure the impacts of invasive species undermines direct comparison of impacts across species, groups of taxa, localities or regions. They go on to argue that in general we have ‘little understanding of the patterns in consistency of impact scores across assessors and protocols, and more importantly, which factors contribute to high levels of consistency.’

Dr González-Moreno said,

“There is an increasing demand for robust and user-friendly impact assessment protocols to be used by professionals with different levels of expertise and knowledge.

Robust NNS impact protocols should ideally result in accurate and consistent impact scores for a species even if applied by different assessors, as long as they have the adequate expertise in the assessed species and context.

Several key factors should be taken into account when selecting or designing an NNS risk assessment protocol, such as the aim, the scope, the consistency and the accuracy of the outcomes, and the resources available to perform the assessment – for example time or information available.”

In compiling a list of recommendations for improved NNS impact protocols, Dr González-Moreno and the team of researchers used 11 different protocols to assess the potential impact of 57 species not native to Europe and belonging to a very large array of taxonomic groups (plants, animals, pathogens) from terrestrial to freshwater and marine environments.

They agree that using a ‘5-level scoring, maximum aggregation method and the moderation of expertise requirements’ offers a good compromise to reducing inconsistencies in research findings without losing discriminatory power or usability.

Dr González-Moreno added, “In general, we also advise protocol developers to perform sensibility tests of consistency before final release or adoption. This is crucial as if a protocol yields inconsistent outcomes when used by different assessors, then it is likely that decisions taken based on the results could be variable and disproportionate to the actual impacts.”

Original source:

González-Moreno P, Lazzaro L, Vilà M, Preda C, Adriaens T, Bacher S, Brundu G, Copp GH, Essl F, García-Berthou E, Katsanevakis S, Moen TL, Lucy FE, Nentwig W, Roy HE, Srėbalienė G, Talgø V, Vanderhoeven S, Andjelković A, Arbačiauskas K, Auger-Rozenberg M-A, Bae M-J, Bariche M, Boets P, Boieiro M, Borges PA, Canning-Clode J, Cardigos F, Chartosia N, Cottier-Cook EJ, Crocetta F, D’hondt B, Foggi B, Follak S, Gallardo B, Gammelmo Ø, Giakoumi S, Giuliani C, Guillaume F, Jelaska LS, Jeschke JM, Jover M, Juárez-Escario A, Kalogirou S, Kočić A, Kytinou E, Laverty C, Lozano V, Maceda-Veiga A, Marchante E, Marchante H, Martinou AF, Meyer S, Michin D, Montero-Castaño A, Morais MC, Morales-Rodriguez C, Muhthassim N, Nagy ZA, Ogris N, Onen H, Pergl J, Puntila R, Rabitsch W, Ramburn TT, Rego C, Reichenbach F, Romeralo C, Saul W-C, Schrader G, Sheehan R, Simonović P, Skolka M, Soares AO, Sundheim L, Tarkan AS, Tomov R, Tricarico E, Tsiamis K, Uludağ A, van Valkenburg J, Verreycken H, Vettraino AM, Vilar L, Wiig Ø, Witzell J, Zanetta A, Kenis M (2019) Consistency of impact assessment protocols for non-native species. NeoBiota 44: 1-25. https://doi.org/10.3897/neobiota.44.31650

Additional information:

The paper is based upon work from the COST Action TD1209: ALIEN Challenge. COST (European Cooperation in Science and Technology) is a pan-European intergovernmental framework. The mission of COST is to enable scientific and technological developments leading to new concepts and products and thereby contribute to strengthening Europe’s research and innovation capacities.

Dr Pablo González-Moreno was supported by the CABI Development Fund (with contributions from ACIAR (Australia) and DFID (UK) and by Darwin plus, DPLUS074 ‘Improving biosecurity in the SAUKOTs through Pest Risk Assessments’.

Text originally published by CABI.

Scientists forecast where is the highly invasive fall armyworm to strike next

*The fall armyworm is the larvae of the fall armyworm moth species Spodoptera frugiperda. Photo by Centre for Agriculture and Bioscience International (CABI).*

Staple and economically important crops throughout the world could be at serious risk if efficient measures are not taken soon

Known to be feeding on many economically important crops cultured across the world, including maize, rice, sugarcane, sorghum, beet, tomato, potato, cotton and pasture grasses, the larvae of the native to the Americas fall armyworm moth seem to have already found a successful survival strategy in a diverse and changing world.

Furthermore, having taken no longer than 2 years to invade and spread throughout most of sub-Saharan Africa, the pest has already demonstrated its huge potential in severely affecting livelihoods around the globe.

A recent study in the open-access journal NeoBiota, conducted by Dr Regan Early of Exeter University, United Kingdom and her colleagues at the Centre for Agriculture and Bioscience International: Dr Pablo González-Moreno, Sean T. Murphy and Roger Day, looks into the factors and likelihood for the fall armyworm (Spodoptera frugiperda) to spread to other regions and continents.

Invasion progress

The alarming reports started in January 2016 when major outbreaks of fall armyworms were registered in Nigeria and Ghana, preceding signals from Benin, Sao Tomé and Togo shortly after. By September 2017, the pest had already been confirmed in 28 sub-Saharan African countries, with nine states expected to follow suit.

While unaided dispersal of the species in Africa is considered unlikely, it is speculated that the pest had arrived on a passenger flight from America. To back this theory, the researchers point out that the first countries to house the invader are also the major air transportation hubs in Africa and have warm, moist climate similar to those in the pest’s natural habitat.

In the aftermath, recent estimates point to up to 50% maize yield loss in Africa attributed to the fall armyworm. However, scientists believe that the species is far from finished spreading and is highly likely to invade new continents.

Who’s next?

To find what makes a region an inviting new habitat for the fall armyworm, hence which countries face the highest threat of future invasions, the researchers looked into both the native and African distributions of the species, and the effects different temperatures and precipitation levels have on it.

Having concluded that the lowest temperatures and the maximum amount of rain play the main role in determining whether the fall armyworm is to establish in a certain region, the scientists concluded that South and Southeast Asia, as well as Australia face the most serious risk, since their climate is very similar to the one preferred by the pest.

However, the authors of the study remind that this forecast shall in no way be taken with a sigh of relief by countries with milder climatic conditions. While the moth needs particular temperature and precipitation amplitudes at its year-round habitat, it could easily travel back and forth up to several hundred kilometres during its seasonal migrations. Therefore, if the fall armyworm establishes in North Africa, it could migrate to Europe during the warmer months, just like it has already been observed to travel from its year-round localities in Argentina, Texas and Florida all the way to Canada’s Québec and Ontario in the north.

The increasing transportation and international trade are also likely to facilitate the further spread of the fall armyworm outside Africa. The scientists conclude that, given the current travel air routes, it is Australia, China, India, Indonesia, Malaysia, Philippines and Thailand which are at high risk of becoming the pest’s new habitat.

*The map illustrates the likelihood of the establishment of the fall armyworm if introduced at different parts of the world. Image by Regan Early.*

What’s next?

Having concluded that there is a considerable potential for near global invasion and seasonal migration of fall armyworm, the scientists call for vigilance from farmers and programme managers alike. They remind that early detection of small larvae is crucial, since it is only at this stage that chemical insecticides would work effectively.

“As fall armyworm has huge potential to affect staple and economic crops globally, we urgently need information on the pest’s potential distribution and environmental limitations,” comment the researchers.

“Management decisions would be improved by further research on fall armyworm’s seasonal migration and population dynamics and the environmental dependency of interactions with other species.”

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Original source:

Early R, González-Moreno P, Murphy ST, Day R (2018) Forecasting the global extent of invasion of the cereal pest Spodoptera frugiperda, the fall armyworm. NeoBiota 40: 25-50. https://doi.org/10.3897/neobiota.40.28165

A preprint of the study was published earlier on bioRxiv.

New fungus found to cause cankers and declines in pistachio trees in Sicily, Italy

Starting in the spring of 2010, farmers from Sicily – the major pistachio production area of Italy – have been reporting a previously unknown disease on the trees. Characterised by cankers and declines, it sometimes leads to the collapse of the entire plant.

When the research team led by Salvatore Vitale, Centro di Ricerca Difesa e Certificazione, Italy, studied plants from a total of 15 pistachio orchards in Catania, Agrigento and Caltanissetta provinces, they identified cankers associated with vascular necrosis and tree decline on twigs, branches and stems, alongside abundant gummosis. There were also localised, sunken lesions with several central cracks. These lesions would deepen into the woody tissue, where discolouration and necrotic tissue were also present.

Additionally, the scientists conducted a series of pathogenicity tests on 5-year-old potted pistachio plants (Pistacia vera), which successfully reproduced the field observations. As a result, a previously unknown pathogenic fungus, which colonises the woody plant tissue, has been isolated.

*Timelapse of the symptoms reproduced in a potted plant.*

The aetiology of the disease and the description of the new species, named Liberomyces pistaciae, are published in the open access journal MycoKeys. Despite cankers and subsequent decline of pistachio trees having been observed in Sicily for several years, the paper is the first work to successfully determine the causal agent.

“On the basis of the high disease incidence and the frequency of this species observed in several orchards in the last years, we believe that L. pistaciae represents amenace to pistachio production in Sicily,” say the researchers.

*Symptoms caused by the newly described pathogenic fungus observed in the field.*

Out of the 15 surveyed orchards, the scientists detected the presence of the fungus in ten of them. Most of the observations occurred in the winter period and during late spring, but the authors found the pathogen in asymptomatic trees as well, which suggests that the fungus has a dormant growth phase.

When already symptomatic, the plants begin to exudate gum. Often, the bark on their trunks and/or branches would scale, appearing as if cracking and peeling. The initial pale circular areas present in the bark turn dark and sunken with time. Later, the infected patches were seen to expand in all directions, yet faster along the main axis of the stems, branches and twigs. When the scientists examined beneath the bark, they saw discoloured and necrotic tissues. Once the trunk of the tree is encircled by a canker, they report, the whole plant collapses.

Other symptoms include canopy decline as well as wilting and dying inflorescences and shoots growing from infected branches or twigs.

The newly described fungus is characterised with slowly growing colonies. With time, they turn from white to pale to dark brown with a whitish slightly lobed margin.

The researchers warn that essential hazard for the further spread and promotion of the infection is the use and distribution of infected propagation material taken from nurseries and mechanical injuries or pruning wounds.

Further research and studies are currently in progress aiming to extend the survey to other areas in order to eventually formulate effective disease management strategies.

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Original source:

Vitale S, Aiello D, Guarnaccia V, Luongo L, Galli M, Crous PW, Polizzi G, Belisario A, Voglmayr H (2018) Liberomyces pistaciae sp. nov., the causal agent of pistachio cankers and decline in Italy. MycoKeys 40: 29-51. https://doi.org/10.3897/mycokeys.40.28636

When lemons give you life: Herpetofauna adaptation to citrus orchards in Belize

Natural habitat areas exhibit similar abundances and diversity of herpetofauna as citrus orchards and reclaimed orchard forests in Stann Creek, Belize, reports a comparative study by researchers Russell Gray and Dr. Colin Strine of Suranaree University of Technology (SUT), Thailand.

The scientists utilized several drift-fence arrays equipped with double-funnel traps to monitor and compare reptile and amphibian communities in a lowland broadleaf forest, a lime orchard and a reclaimed citrus orchard at the Toucan Ridge Ecology and Education Society (TREES) field station. Their study was recently published in the open-access journal ZooKeys.

Often referred to as Central America’s “hidden gem” for its abundance of undisturbed rainforests and natural beauty, Belize has a long-standing record for vigorously protecting and maintaining their forested areas. However, just as in any other developing country, its primary sector is expanding with agricultural land clearings becoming more frequent with newly established properties.

Approximately midway through the study (June – September 2016), the site was hit by Hurricane Earl, a Category 1 hurricane. The hurricane-force winds altered the canopy cover significantly over the forested study sites, due to felled trees and broken branches.

Surprisingly enough, the herpetofauna remained relatively unchanged in the aftermath of Earl. The phenomenon revealed that not only were herpetofaunal communities lacking sensitivity to anthropogenic changes in the area, but also to extreme weather events, even though these had affected most of the standing vegetation.

Some notable observations occurred within three days of Hurricane Earl, according to Russell Gray:

“One of the trapping system was catching arboreal [tree climbing] snake species, like the cat-eyed snake and blunt-headed tree snake. This wasn’t only interesting because arboreal snakes were caught in terrestrial traps, but rather because they were never caught in our traps during the study up to this point.”

“Even more interesting is that they were caught exclusively in the manicured orchard area, which makes me wonder if they somehow predicted falling trees and fled to the only habitat without them. Some animals appear to forecast weather events due to sudden or drastic changes in environmental conditions. I wonder if this is a similar case.”

Amongst other notable scientific discoveries reported during the project were two new accounts of the Petén Centipede Snake (Tantilla hendersoni), one of which was the first documented male of the species. This secretive snake had only been documented once prior to the study and is the only endemic snake species to Belize.

Further noteworthy instances were two range extensions for relatively data deficient species – one for the Doflein’s Salamander (Bolitoglossa dofleini) and another for the Ringneck Coffee Snake (Ninia diademata).

Besides providing important data on herpetofauna assemblages in various disturbed and undisturbed habitats in Belize, the research identifies future conservation methods to be considered.

The study serves as new evidence that as long as agricultural areas remain surrounded with natural habitat buffers, they have little effect on herpetofaunal communities.

Replicates of this study are encouraged by the authors and can be utilized as a feasible and efficient way to monitor reptiles and amphibians in Belize.

Although Belize still preserves a considerable amount of intact forest cover, there are several on-going conservation concerns. Besides agricultural land clearings, there are constant struggles with xate poachers, or “Xateros”, on the Guatemalan border, as well as illegal logging activities and illegal off-season hunting.

Unfortunately, reptiles and amphibians have been understudied in comparison to other vertebrates and government action is rarely enforced on their conservation throughout the Neotropics.

A striking example of this relates to the only critically endangered reptile in Belize – the Hickatee turtle (Dermatemys mawii). Although the species is likely to become extinct, it is still traditionally collected for its culinary value, while its hunting is banned only in May.

In conclusion, the authors note that it is crucial to pay close attention to anthropogenic activity and the potential repercussions it may have on native species. With extensive and active efforts to study Mesoamerican herpetofauna, proper conservation efforts can be implemented and focused.

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Original Source:

Gray R, Strine CT (2017) Herpetofaunal assemblages of a lowland broadleaf forest, an overgrown orchard forest and a lime orchard in Stann Creek, Belize. ZooKeys 707: 131-165. https://doi.org/10.3897/zookeys.707.14029