Tag: biodiversity

Living together in mud: New bivalve species dwelling on a sea cucumber discovered in Japan

Most bivalves live in sand or mud or attached to rock surface. However, a new bivalve species described from Japan lives on a sea cucumber.

Ryutaro Goto, postdoctoral fellow in Museum of Zoology and Department of Ecology and Evolutionary Biology, University of Michigan, and Hiroshi Ishikawa, amateur malacologist in Japan, have their paper, describing the new species, published in the open access journal ZooKeys.

The new species, named Borniopsis mortoni(Galeommatoidea), was discovered in mudflats at the mouth of the Souzu River, southwestern Shikoku Island, Japan.

This bivalve has tiny brownish shells (up to 4.1 mm in length). The species lives attached by both its foot and byssal threads to the body surface of the earthworm-like sea cucumberPatinapta ooplax (Synaptidae). Individuals of B. mortoni are often found on the same host, yet sometimes there could be more than 10 individuals existing side-by-side.

The new species is dedicated to a famous British malacologist Brian Morton, emeritus professor of University of Hong Kong. He has described many interesting Pseudopythina species from mudflats in Hong Kong, now assigned to the genus Borniopsis.

Host sea cucumbers burrow in mudflats. Most likely, the B. mortoni bivalve uses the host burrows as shelter from predators.

The new species is one of the smallest species in this genus. With the burrow of the host sea cucumber being very narrow, the small body size of B. mortoni is probably a corresponding adaptation.

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Original source:

Goto R, Ishikawa H (2016) Borniopsis mortoni sp. n. (Heterodonta, Galeommatoidea, Galeommatidae sensu lato), a new bivalve commensal with a synaptid sea cucumber from Japan. ZooKeys 615: 33-45. doi: 10.3897/zookeys.615.8125

Crab from the Chinese pet market turns out to be a new species of a new genus

Shimmering carapaces and rattling claws make colourful freshwater crabs attractive to pet keepers. To answer the demand, fishermen are busy collecting and trading with the crustaceans, often not knowing what exactly they have handed over to their client.

Luckily for science and nature alike, however, such ‘stock’ sometimes ends up in the hands of scientists, who recognise their peculiarities and readily dig into them to make the next amazing discovery. Such is the case of three researchers from University of New South Wales, Australia, The Australian Museum, Sun Yat-sen University, China, and National Chung Hsing University, Taiwan, who have found a new species and even a new genus of freshwater crab, and now have it published in the open access journal ZooKeys.

Knowing about the growing demand for eye-catching freshwater crabs from southern China, the authors took a look at the ornamental fish market to eventually identify an individual with unusually structured male gonopod, which in crustaceans is a swimming appendage modified to serve as a reproductive organ. Having their interest drawn by the peculiar crab, lead author Chao Huang managed to persuade the fish dealer to let them survey the collection site located in northern Guangdong, southern China.

Despite superficial resemblance to an already existing freshwater crab genus, at second glance, the crab turned out to be quite distinct thanks to a unique set of features including the carapace, the gonopod and the relatively long and slender legs. Once the molecular analyses’ results were also in, the authors had enough evidence to assign the freshwater crab as a species and even a genus new to science.

Being a primarily aquatic species, the new crab prefers the pools of limestone hillstreams, therefore its name Yuebeipotamon calciatile, where calciatile means ‘living on limestone’. To adapt to the habitat, the species seems to have developed its characteristic slender legs, which make it easier for the crab to climb and move around whenever the short-lived limestone hillstreams make it search for a new home.

The carapace of the new crab is usually coloured in maroon to dark brown, while the claws and legs are reddish to purplish. Interestingly, the adults are much more vivid compared to the juveniles.

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Original source:

Citation: Huang C, Shih H-T, Mao SY (2016) Yuebeipotamon calciatile, a new genus and new species of freshwater crab from southern China (Crustacea, Decapoda, Brachyura, Potamidae). ZooKeys 615: 61-72. doi: 10.3897/zookeys.615.9964

New species of butterflyfish in the deep reefs of now Earth’s largest protected area Papahānaumokuākea

In the midst of the ongoing IUCN World Conservation Congress in Honolulu, scientists from Bishop Museum and NOAA published a description of a new species of butterflyfish from deep reefs of the Papahānaumokuākea Marine National Monument in the remote Northwestern Hawaiian Islands, which was recently expanded by President Barack Obama to become world’s largest protected area. The study is published in the open-access scientific journal ZooKeys.

“Butterflyfish are among the most conspicuous fishes on the reefs,” said Richard Pyle, Bishop Museum researcher and first author on the publication. “They are colorful, beautiful, and have been well-studied worldwide. Thus, finding a new species of butterflyfish is a rare event.”

RPyleCollectingHolotypeP.basabei — Author Dr Richard Pyle collecting an individual of the new butterflyfish P. basabei

Coral reefs at depths of 100 to 500 feet, also known as mesophotic coral ecosystems or the coral-reef “twilight zone,” are among the most poorly explored of all marine ecosystems. Deeper than scuba divers can safely venture, and shallower than most submersible-based exploration, these reefs represent a new frontier for coral-reef research.

“Discoveries such as this underscore how poorly explored our deep coral reefs are,” said Randall Kosaki, NOAA scientist and co-author of the study. “Virtually every deep dive reveals a reef that no human being has ever laid eyes on.” Pyle and Kosaki have pioneered the use of advanced mixed-gas diving systems known as rebreathers (because they recycle the diver’s breathing gas). Rebreathers allow deeper and longer dives, enabling new opportunities for exploring and documenting deep coral reef habitats throughout the world’s tropical seas.

The new butterflyfish was first seen in submersible video over twenty years ago, at depths exceeding 600 feet. At the time, Pyle and University of Hawai‘i marine biologist E.H. “Deetsie” Chave recognized it as a potential new species. However, because of the extreme depths, it was years before technical divers using rebreather technology were able to collect specimens for proper scientific documentation.

Using this technology, NOAA and Museum researchers have encountered the new butterflyfish regularly during deep exploratory dives up to 330 feet on NOAA expeditions to the Monument, where the specimens for the scientific description were collected

The new fish, Prognathodes basabei, is named after Pete Basabe, a veteran local diver from Kona, Hawai‘i who, over the years, has assisted with the collection of reef fishes for numerous scientific studies and educational displays. Basabe, an experienced deep diver himself, was instrumental in providing support for the dives that produced the first specimen of the fish that now bears his name.

The Holotype, the Author, the Publisher Author Dr Richard Pyle (left) with Pensoft's and ZooKeys' founder Prof Lyubomir Penev (right) with the new butterflyfish P. basabei — The Holotype, the Author, the Publisher
Author Dr Richard Pyle (left) and Pensoft’s and ZooKeys’ founder Prof Lyubomir Penev (right) with the new butterflyfish P. basabei

At the urging of Native Hawaiian leaders, conservationists, and many marine scientists, President Obama recently expanded the Papahānaumokuākea Marine National Monument. At 582,578 square miles, Papahānaumokuākea is now the largest protected area on Earth.

“This new discovery illustrates the conservation value of very large marine protected areas,” said Kosaki. “Not only do they protect the biodiversity that we already know about, they also protect the diversity we’ve yet to discover. And there’s a lot left to discover.”

Original source:
Pyle RL, Kosaki RK (2016) Prognathodes basabei, a new species of butterflyfish (Perciformes, Chaetodontidae) from the Hawaiian Archipelago. ZooKeys 614: 137-152. doi: 10.3897/zookeys.614.10200

Species conservation profile of a critically endangered endemic for the Azores spider

Subject to continuing population decline due to a number of factors, an exclusively cave-dwelling (troglobitic) spider endemic to the Azores is considered as Critically Endangered according to the IUCN Red List criteria.

To provide a fast output, potentially benefiting the arachnid’s survival, scientists from the IUCN – Spider and Scorpion Specialist Group and the Azorean Biodiversity Group (cE3c) at University of Azores, where the main objective is to perform research that addresses societal challenges in ecology, evolution and the environment, also known as the three E’s from the centre’s name abbreviation, teamed up with colleagues from University of Barcelona, Spain, and the Finnish Museum of Natural History.

Together, they make use of a specialised novel publication type feature, called Species Conservation Profile, created by the open access journal Biodiversity Data Journal, to provide scholarly credit and citation for the IUCN Red List species page, as well as pinpoint the population trends and the reasons behind them.

The studied spider species (scientifically called Turinyphia cavernicola) is a pale creature with long legs, large eyes and a total size of merely 2 mm in length. These spiders never leave their underground habitats, which are strictly humid lava tubes and volcanic pits. There they build sheet webs in small holes and crevices on the walls of the caves.

Not only is the species restricted to a single island within the Azorean archipelago (Portugal), but it is only found in three caves. Furthermore, out of the three, only one of them is home to a sustainable large population. These caves are under severe threat due to pasture intensification, road construction and tourist activities.

Although there is not much information about the species distribution through the years, with the spider having been discovered as recently as in 2008, the authors make the assumption that originally there have been significantly greater populations. Not only have they studied thoroughly another fifteen caves located on the island without finding any individuals, but they have identified increasing anthropogenic impact on the habitat.

“The species original distribution was potentially very large compared with the current,” the scientists explain. “Relatively intensive searches in and around the current caves where the species occurs have failed to find additional subpopulations.”

“The trend of decline is based on the assumption that this species can occur in all these caves and that the absence is due to anthropogenic disturbance on caves during the last 50 years,” they note.

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Original source:

Borges P, Crespo L, Cardoso P (2016) Species conservation profile of the cave spiderTurinyphia cavernicola (Araneae, Linyphiidae) from Terceira Island, Azores, Portugal.Biodiversity Data Journal 4: e10274. doi: 10.3897/BDJ.4.e10274

Unusual new zoantharian species is the first described solitary species in over 100 years

A very unusual new species of zoantharian surprised Drs Takuma Fujii and James Davis Reimer, affiliated with Kagoshima University and University of the Ryukyus.

The scientists stumbled upon a solitary individual polyp while conducting SCUBA surveys around the southern Japanese island of Okinawa. They noticed that the creatures were buried almost completely in the soft sediment of the seafloor. It was only their oral disks and tentacles that were protruding above the surface.

Generally, most known zoantharians are colonial (hence their common name of ‘colonial anemones’), and many dwell in shallow waters of subtropical and tropical regions, where their large colonies can be found on coral reefs.

However, these newly discovered polyps were not only leading solitary lives. They were also found to lack zooxanthellae, single-celled organisms that coexist in symbiosis with certain marine invertebrates, also typical for the majority of zoantharians.

The discovery of this unusual new species is reported in the open access journal ZooKeys.

Solitary zoantharian species, such as this one, are known from scant few reports, and only three species are described, all reported more than 100 years ago from the Indo-Pacific region. Overall, very little is known about the hereby studied genus Sphenopus.

The new species, named Sphenopus exilis, is much smaller than the other three Sphenopus species, with its polyps measuring approximately 3 cm in length. It is currently only known from two bays on the east coast of Okinawa Island.

Both of the bays where Sphenopus exilis is found are threatened by development, with one of the bays currently the center of controversy over a proposed American military base expansion and landfill.

“This report demonstrates how much more research is needed on these understudied ecosystems”, stated lead author Dr. Takuma Fujii.

“The only reason this species was discovered was that the right person was in the right place at the right time”, added co-author Dr. James Reimer.

“Such research also shows how important it is to have specialist researchers participate in surveys — otherwise, we might be missing a lot of the biodiversity present in the marine realm simply because we don’t know what we are looking at,” he concluded.

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Original source:

Fujii T, Reimer JD (2016) A new solitary free-living species of the genus Sphenopus (Cnidaria, Anthozoa, Zoantharia, Sphenopidae) from Okinawa-jima Island, Japan. ZooKeys 606: 11-24. doi: 10.3897/zookeys.606.9310

Scorpionfish too deep for SCUBA divers caught by submersible turns out to be a new species

Smithsonian Institution’s DROP project describes a tenth new fish species near the Caribbean island of Curaçao

Discovered by scientists using the manned submersible Curasub in the deep-reef waters of the Caribbean island of Curaçao, a new scorpionfish species is the latest one captured with the help of the sub’s two robotic arms.

Found by Dr. Carole C. Baldwin, lead scientist of the Smithsonian’s Deep Reef Observation Project (DROP) and based at the Smithsonian Institution in Washington, DC, Ms. Diane Pitassy, also affiliated with the Smithsonian in Washington, and Dr. Ross Robertson, Smithsonian Tropical Research Institute, Panama, the new species is described in the open access journal ZooKeys. In their paper, the authors also discuss the depth distributions and relationships of western Atlantic members of its genus.

The new scorpionfish is distinguished from other similar scorpionfishes by a number of physical traits, including its distinctive bright orange-red colors, more elongated fin rays, and DNA. Inhabiting depths between 95 m and 160 m, it is also the deepest-living member of its genus in the western Atlantic Ocean.

The new scorpionfish is officially called Scorpaenodes barrybrowni in honor of Substation Curaçao and freelance photographer Barry Brown, who “has patiently, diligently, and expertly taken photographs of hundreds of fishes and invertebrates captured alive by DROP Investigators,” explain the authors. “He has generously shared his photographs, and they have enhanced numerous scientific and educational publications. It is an honor to recognize Barry Brown’s contributions to science through his photography.”

8590_Image2 — Another scorpionfish species belonging to the same genus.

“Fish specimens that are brought up from deep reefs only occasionally surface alive,” explains Baldwin. When DROP scientists return to the surface in the Curasub with a living fish, Barry races it to his aquarium and begins to work his photographic magic.”

The new fish already has a common name as well. For the public, it will be known as the Stellate Scorpionfish, deriving from its star-shaped yellowish spots and the radiating pigment markings accentuating its eyes.

The manned submersible Curasub reaches depths up to 300 m and is used by DROP and other marine scientists to search for tropical marine fishes and invertebrates, while conventional SCUBA divers are unable to reach deeper than 30 – 50 metres below the water surface.

“The 50-300 m tropical ocean zone is poorly studied – too deep for conventional SCUBA and too shallow to be of much interest to really deep-diving submersibles,” notes Baldwin. “The Curasub is providing scientists with the technology needed to remedy this gap in our knowledge of Caribbean reef biodiversity.”

The sub relies on two hydraulic arms, one equipped with a suction hose, and the other designed to immobilize the fish with an anaesthetizing chemical. Once anesthetized, the individuals are collected with the suction hose, which empties into a vented plexiglass cylinder attached to the outside of the sub.

In January, the team of Drs. Luke Tornabene, Robertson and Baldwin discovered the Godzilla goby. About a year ago, Baldwin and Robertson stumbled upon another new goby species, which amazed the scientists with its love for the depths so much that they named it after the Curasub. In 2013, the authors recognized the DROP research program in the name of a beautiful new species of small blenny fish, Haptoclinus dropi.

“Stay tuned for more new discoveries,” suggests Baldwin. “We have only scratched the surface of our understanding of the biodiversity of tropical deep reefs.”

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Original source:

Baldwin CC, Pitassy DE, Robertson DR (2016) A new deep-reef scorpionfish (Teleostei, Scorpaenidae, Scorpaenodes) from the southern Caribbean with comments on depth distributions and relationships of western Atlantic members of the genus. ZooKeys 606: 141-158. doi: 10.3897/zookeys.606.8590

Greek heroic deity Prometheus now has a namesake in a new tiny rain frog from Ecuador

Prometheus, the mythological Greek heroic deity, has been given a namesake in a new species of tiny rain frog, discovered in southwestern Ecuador. The name was chosen by the international team of scientists, led by Dr Paul Szekely, Ovidius University, Constanta, Romania, in acknowledgement of the Prometeo program, funded by the Ecuadorian government.

The description of this new species (Pristimantis prometeii) is the result of the cooperation between three Romanian Prometeo investigators affiliated with the Universidad Tecnica Particular de Loja and Universidad Nacional de Loja, and two Ecuadorian specialists from Pontificia Universidad Catolica del Ecuador. The full study is available from the open access ZooKeys.

During the day, frogs of the new species were found hiding in flowering plants, while at night — perching on leaves at low heights in well preserved cloud forests. They grow to 2-3 cm with the females being larger than the males.

The newly described species is part of a group of frogs called Terrarana (meaning ‘Land or terrestrial frogs’). This is a lineage of frogs that has evolved directly developing eggs, which are deposited in terrestrial habitats. Unlike other frogs, these ones do not have an aquatic tadpole stage and the embryos develop directly into froglets on land.

The newly described species is only known from Reserva Biologica Buenaventura, southwestern Ecuador, at elevations between 878 and 1082 m. This reserve is privately owned by the Jocotoco Conservation Foundation. The reserve has at least another four endemic species of amphibians, reptiles, and birds.

With more than 470 species, the directly developing rain frogs of the genus Pristimantiscontinue to surprise everyone.

“While new species are described every year, there are over a hundred discovered over the last decade only,” remind the authors.

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Original source:

Szekely P, Cogalniceanu D, Szekely D, Paez N, Ron SR (2016) A new species of Pristimantis from southern Ecuador (Anura, Craugastoridae). ZooKeys 606: 77-97. doi: 10.3897/zookeys.606.9121

Orchid or Demon: Flower of a new species of orchid looks like a devil’s head

A lone and unique population of about 30 reddish to dark violet-maroon orchids grows on the small patch of land between the borders of two Colombian departments. However, its extremely small habitat is far from the only striking thing about the new species.

A closer look at its flowers’ heart reveals what appears to be a devil’s head. Named after its demonic patterns, the new orchid species, Telipogon diabolicus, is described in the open access journal PhytoKeys.

Discovered by Dr Marta Kolanowska and Prof Dariusz Szlachetko, both affiliated with University of Gdansk, Poland, together with Dr Ramiro Medina Trejo, Colombia, the new orchid grows a stem measuring between 5.5 – 9 cm in height.

With its only known habitat restricted to a single population spread across a dwarf montane forest at the border between departments Putumayo and Nariño, southern Colombia, the devilish orchid is assigned as a Critically Endangered species in the IUCN Red List.

Although the curious orchid could be mistakenly taken for a few other species, there are still some easy to see physical traits that make the flower stand out. Apart from the demon’s head hidden at the heart of its colours, the petals themselves are characteristically clawed. This feature has not been found in any other Colombian species of the genus.

“In the most recent catalogue of Colombian plants almost 3600 orchid species representing nearly 250 genera are included,” remind the authors. “However, there is no doubt that hundreds of species occurring in this country remain undiscovered. Only in 2015 over 20 novelties were published based on material collected in Colombia.”

Original source:

Kolanowska M, Szlachetko DL, Trejo RM (2016) Telipogon diabolicus (Orchidaceae, Oncidiinae), a new species from southern Colombia. PhytoKeys 65: 113-124. doi:10.3897/phytokeys.65.8674

More assassins on the radar: As many as 24 new species of assassin bugs described

As many as 24 assassin bugs new to science were discovered and described by Dr. Guanyang Zhang and his colleagues. In their article, published in the open access Biodiversity Data Journal, they describe the new insects along with treating another 47 assassin bugs in the same genus. To do this, the scientists examined more than 10,000 specimens, coming from both museum collections and newly undertaken field trips.

Assassin bugs are insects that prey upon other small creatures, an intriguing behavior that gives the common name of their group. There are some 7000 described species of assassin bugs, but new species are still being discovered and described every year.

The new species described by scientists Drs Guanyang Zhang, University of California, Riverside, and Arizona State University, Elwood R. Hart, Iowa State University, and Christiane Weirauch, University of California, Riverside, belong to the assassin bug genus Zelus.

Linnaeus, the Swedish scientist, who established the universally used Linnean classification system, described the first species (Zelus longipes) of Zelus in 1767. Back then, he placed it in the genus Cimex, from where it was subsequently moved to Zelus. All of Zhang & Hart’s new species are from the Americas. Mexico, Panama, Peru, Colombia and Brazil are some of the top countries harboring new species.

To conduct the research, Zhang examined more than 10,000 specimens and nearly all of them have been databased. These specimen records are now freely and permanently available to everybody. Zhang’s work demonstrates the value of natural history collections. The specimens used in his work come from 26 museums in nine countries. The discovery of the new species would not have been possible without these museums actively collecting and maintaining their insect collections.

It took more than a century for some of the new species to be formally recognized and described. The first specimens of the species Zelus panamensis and Zelus xouthos, for example, had been collected in 1911 and 1915 from Panama and Guatemala. However, since then they had been waiting quietly in the collection of the Smithsonian National Museum of Natural History, USA. Now, over 100 years later, they are finally discovered and given scientific names.

Meanwhile, more recently collected specimens also turned out to be new species. Specimens of Zelus lewisi and Zelus rosulentus were collected in 1995 and 1996 from Costa Rica and Ecuador, about two decades ago, a timeframe considered relatively short for taxonomic research. These interesting patterns of time lapse between specimen collecting and scientific description suggest that it is equally important to examine both long deposited in museums specimens and those newly collected from the field.

The kind of research performed by Zhang and his colleagues is called revisionary taxonomy. In revisionary taxonomy a researcher examines a large number of specimens of a group of organisms of his or her interest. This can be either a monophyletic lineage or organisms from a particular region. The scientist’s goal is to discover and describe new species, but also examine and revise previously published species.

Besides describing new species, the present taxonomic monograph treats another 47 previously described species. Nearly all species now have images of both males and females and illustrations of male genitalia. Some of these insects are strikingly brightly colored and some mimic wasps.

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Original source:

Zhang G, Hart E, Weirauch C (2016) A taxonomic monograph of the assassin bug genusZelusFabricius (Hemiptera: Reduviidae): 71 species based on 10,000 specimens. Biodiversity Data Journal 4: e8150.doi: 10.3897/BDJ.4.e8150

Old specimens establish a new bamboo worm genus and species

Bamboo worms (family Maldanidae) comprise an easily recognizable family of bristle worms (class Polychaeta). Their common name they receive because of their elongated segments, ending with an appendage, which gives them the joint appearance of slender bamboo-shoots. These often fragile marine inhabitants can be found in mud-walled tubes in shelf sediments.

However, bamboo worms are tough to identify from each other. The problem is that to safely recognize them, a researcher needs both anterior and posterior ends from the same specimen. Nevertheless, now PhD student Wang Yueyun and Dr Li Xinzheng from the Marine Biological Museum, Institute of Oceanology, Chinese Academy of Sciences have discovered two new species and a new genus (Paramaldane). The new bamboo worms are described in the open access journal ZooKeys.

Several specimens of the new genus were found during re-examination of specimens collected from South China Sea between 1959 to 1962. The new genus is characterized by the collar-like glandular band on the sixth chaetiger. This is the first discovery of a collar-like structure in the subfamily of Maldaninae. Moreover, there is only one species in this genus till now.

Another discovery, published in the present study, is the second new species, called Maldane adunca, which belongs to another genus within the family. It is similar to the cosmopolitan species Maldane sarsi, yet the differences are clear. The shape of its nuchal grooves, a kind of sense organ, is much more curved, thus resembling hooks. Therefore, it is called adunca, meaning ‘hooked’ in Latin.

Both new species are only found in mud sediment of offshore waters of Hainan Island.

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Original source:

Wang Y, Li X (2016) A new Maldane species and a new Maldaninae genus and species (Maldanidae, Annelida) from coastal waters of China. ZooKeys 603: 1-16. doi: 10.3897/zookeys.603.9125