Giant isopods of the genus Bathynomus, which can reach more than 30 cm in length, are known as bọ biển or “sea bugs” in Vietnam. For the first time, one such species was described from Vietnamese waters and named Bathynomus vaderi. The name “vaderi” is inspired by the appearance of its head, which closely resembles the distinctive and iconic helmet of Darth Vader, the most famous Sith Lord of Star Wars.
The head of Bathynomus vaderi. Image by Nguyen Thanh Son
Bathynomus vaderi belongs to a group known as “supergiants,” reaching lengths of 32.5 cm and weighing over a kilogram. So far, this new species has only been found near the Spratly Islands in Vietnam, but further research will probably confirm its presence in other parts of the South China Sea.
Dr. Nguyen Thanh Son holding a giant specimen of another species of giant isopod found in Vietnam (B. jamesi) that weighed 2.62 kg from a seafood market in Hanoi, October 2024. Photo by Peter Ng
Giant isopods like Bathynomus vaderi have become an expensive delicacy in Vietnam. Until 2017, local fishermen only sold them as a bycatch product for low prices, but in recent years the media has drawn public attention to this unusual seafood. Some go as far as claiming it’s more delicious than lobster, the “king of seafood”.
Prof. Peter Ng examining giant isopods from a seafood market in Hanoi, October 2024. Photo by Nguyen Thanh Son
These animals have been commercially fished by trawlers operating in various deep-water parts of Biển Đông ( East Sea, Vietnamese part of the South China Sea) and offshore of provinces in south-central coastal of Vietnam. Over the last five years, it has become common to see themsold alive in some seafood markets in Hanoi, Hồ Chí Minh City, and Đà Nẵng City. Some outlets and restaurants even advertise the saleof these “sea bugs” online on various social media platforms, including how best to cook them!
Dr. Conni Sidabalok examining individuals of Bathynomus vaderi at Lee Kong Chian Natural History Museum, Singapore. Photo by Rene Ong
In March 2022, staff from Hanoi University purchased four giant isopod individuals from Quy Nhơn City and sent two of them to Peter Ng from the Lee Kong Chian Natural History Museum in the National University of Singapore for identification. Peter Ng has a very active crustacean laboratory in Singapore and has worked on the deep-sea fauna from many parts of Asia. He subsequently co-opted Conni M. Sidabalok from the National Research and Innovation Agency Indonesia, who had described Bathynomus from southern Java with him. Together with Nguyen Thanh Son from the Vietnam National University, who is the resident crustacean researcher there, they studied the specimens. In early 2023, they realised they had specimens of a so far undescribed species. Now, they have published their findings in the open-access journal ZooKeys.
The discovery of a species as strange as Bathynomus vaderi in Vietnam highlights just how poorly we understand the deep-sea environment. That a species as large as this could have stayed hidden for so long reminds us just how much work we still need to do to find out what lives in Southeast Asian waters.
There is an urgent need to better understand our deep-sea biodiversity as humans increasingly endeavour to exploit this habitat for fisheries, oil and gas, and even minerals. The sustainable fishery of giant isopods just adds to the many challenges we face. And the first step is to know what lives there.
Research article:
Ng PKL, Sidabalok CM, Nguyen TS (2025) A new species of supergiant Bathynomus A. Milne-Edwards, 1879 (Crustacea, Isopoda, Cirolanidae) from Vietnam, with notes on the taxonomy of Bathynomus jamesi Kou, Chen & Li, 2017. ZooKeys 1223: 289–310. https://doi.org/10.3897/zookeys.1223.139335
Back in 2018, I began conducting fieldwork on grasshoppers in Texas. Among the specimens I collected that year, I noticed something intriguing—what appeared to be a new species of Agroecotettix. That initial discovery set the stage for years of research, stretching through 2024. During this time, I continued to collect Agroecotettix specimens and studied collections from several institutions, including the Academy of Natural Sciences in Philadelphia, the University of Michigan Museum of Zoology, Brigham Young University, and the Mississippi Entomological Museum.
Agroecotettix aristus.
By analyzing these specimens, I identified 16 new species of Agroecotettix from the United States and Mexico. Interestingly, most of these species are associated with mountainous of Texas and Mexico. Some also inhabit the South Texas Plains ecoregion and the Edwards Plateau.
Habitat and Behavior of Agroecotettix
Agroecotettix grasshoppers are often found on thorny, leguminous shrubs such as Acacia and Vachella. Mesquite is typically not a host. In the Big Bend region of Texas, I often found them on Sotol—sometimes consuming pollen, other times seeking shade beneath the leaves during the heat of the day.
Individuals of Agroecotettix dorni roosting during the heat of the day on Dasylirion leaves
One sweltering day in Big Bend National Park, it was 113°F, and I was trudging through Boquillas Canyon, searching for grasshoppers. After two hours of seeing a couple grasshoppers, I was ready to leave. Then, glancing up, I spotted 40 or 50 grasshoppers clustered on the undersides of Sotol leaves, sheltering from the mid-day sun. Many of them were Agroecotettix, alongside other flightless desert grasshoppers like Phaulotettix and Netrosoma. It was just like picking fruit off a tree—no net needed.
A view from Big Bend National Park.
Agroecotettix crypsidomus.
Much of what we now know about Agroecotettix species stems from the work of Dr. Theodore Cohn. During the 1950s and 1960s, he conducted extensive fieldwork in Mexico, often in areas that are now too dangerous to access. His collections were invaluable for identifying several of the new species, highlighting the enduring importance of historical specimens and natural history collections.
Naming these species offered a unique opportunity to honor individuals and ideas that have influenced me such as:
LeVar Burton: One species is named after this the Reading Rainbow and Star Trek icon. Burton is an American treasure who has inspired a love of reading in millions, including me. As a child, I grew up watching Reading Rainbow and later found myself reading those same books to my own kids during school events.
Ted Turner: Another species honors Ted Turner, the entrepreneur and conservationist. Turner’s efforts to preserve vast swaths of the western U.S. have will have a lasting impact on biodiversity.
Image of Michael Dorn courtesy of Supercon Conventions under a CC BY 2.0 license
Michael Dorn: Known for playing Worf on Star Trek, Dorn inspired another species name. Work was always my favorite character. A portion of this species anatomy resembled a Klingon weapon, making the connection apt.
IDIC: One species is named after the Vulcan philosophy of “Infinite Diversity in Infinite Combinations.” This Star Trek principle seemed a fitting name for a species in this group of cryptic species.
Jay Silverheels: another species honors Silverheels’ cultural impact and the Texas landscapes where the series was set. A Native American athlete and actorwho most famously portrayed the fictional character Tonto in “The Lone Ranger” television series from 1949-1957, Silverheels was one of the first Native American actors to portray a major Indigenous character on a television series. Throughout his career, Silverheels advocated for more inclusion of Indigenous people in media and founded the Indian Actors Workshop in Los Angeles during the 1960’s.
Clayton Moore: Known for playing the Lone Ranger, “moorei” honors Clayton Moore for his portrayal of this fictional Texas Ranger that embodied justice, bravery, and connection to the American West.
Frida Kahlo: The species name kahloae patronym the iconic Mexican painter known for her vivid and symbolic artwork. Her enduring connection to Mexican culture makes her an apt figure to be commemorated through this species, which is endemic to Mexico.
Exploring the Agroecotettix genus has been a journey into the unexpected. What began as a few curious specimens turned into the discovery of 16 species (and counting). The biodiversity of this group, particularly in Mexico, is likely even greater than we currently realize.
The natural world never ceases to amaze. Just when you think you’ve seen it all, you look a little closer using new techniques or tools—and suddenly, there’s a universe of diversity waiting to be discovered.
Research article:
Hill JG (2024) Desert diversification: revision of Agroecotettix Bruner, 1908 (Orthoptera, Acrididae, Melanoplinae) with descriptions of sixteen new species from the United States and Mexico. ZooKeys 1218: 177-230. https://doi.org/10.3897/zookeys.1218.133703
The Hades’ snake moray (Uropterygius hades), a dark brown, slender snake moray eel, has chosen the road less traveled, thriving in dim and muddy river mouths, unlike most of its marine moray eel relatives. It is widely distributed across the Central Indo-Pacific, and has been found in southern Japan, Taiwan, the Philippines, southern Java, and Fiji. This new moray eel was named after Hades, the god of the underworld, due to its unique habitat, burrowing behavior, high sensitivity to light, and most notably, its deep, dark coloration.
Live photo of Uropterygius hades. Image credit: Dr Wen-Chien Huang
Scientists Dr Wen-Chien Huang, Dr Rodulf Anthony Balisco, Dr Te-Yu Liao, National Sun Yat-sen University, Taiwan, Western Philippines University, the Philippines, and Dr Yusuke Hibino, Kitakyushu Museum of Natural History and Human History, Japan, describe this new species in a paper published in the open-access journal ZooKeys. They named it after Hades, the underworld god, to emphasize its imposing appearance and its habitat in dim, turbid environments. This idea was inspired by Dr. Wen-Chien Huang, who was influenced by Ralph Fiennes’ portrayal of Hades in the movie Clash of the Titans.
Live photo of Uropterygius hades. Image credit: Dr Wen-Chien Huang
There are approximately 230 species of moray eels worldwide, with most inhabiting marine environments. Only one species has been confirmed to spend the majority of its life in freshwater. Some marine species, like the slender giant moray (Strophidon sathete), can tolerate and occasionally enter lower-salinity environments such as river mouths. However, moray eels specifically adapted to estuarine habitats are exceedingly rare.
The discovery of Hades’ snake moray was actually accidental, when the three researchers from National Sun Yat-sen University investigated the cave of the Puerto Princesa Subterranean River, aiming to survey the aquatic fauna and targeting a cave eel species, the bean-eyed snake moray (Uropterygius cyamommatus). This eel, with its highly reduced eye size, is considered an ideal example for studying the evolutionary processes that allow eels to adapt to cave environments. However, the researchers did not find any bean-eyed snake morays in the cave; instead, they collected a slender moray with a conspicuous, uniformly deep dark color.
Fresh specimen of Uropterygius hades. Credit: Dr Wen-Chien Huang
When kept in an aquatic tank, the Hades’ snake moray exhibits tail-first burrowing behavior, which is rarely seen in moray eels. Additionally, it is highly sensitive to light, consistently attempting to hide when exposed to it. Its small eyes—thought to be an adaptation to low-light environments—and its reduced number of head sensory pores—believed to help avoid clogging by the substrate—suggest that this species might be an excellent burrower, relying primarily on chemoreception rather than vision to detect prey or avoid predators.
Original source:
Huang W-C, Hibino Y, Balisco RA, Liao T-Y (2024) Description of a new uniformly brown estuarine moray eel (Anguilliformes, Muraenidae) from the Central Indo-Pacific Ocean. In: Ho H-C, Russell B, Hibino Y, Lee M-Y (Eds) Biodiversity and taxonomy of fishes in Taiwan and adjacent waters. ZooKeys 1220: 15-34. https://doi.org/10.3897/zookeys.1220.129685
If you follow any of Pensoft’s social media accounts, you will know that we have been counting down our top 10 favourite species described as new-to-science in our journals this year.
The list is—of course—entirely arbitrary, but it is also a fun way to look back on a year in which several weird and wonderful animals, plants and fungi were discovered.
In this blog post, we will tell you more about each species, share some honourable mentions, and reveal our number 1 spot!
Honourable mentions
The league of legends crab
Gothus teemo and Teemo.
When it was time to name a tiny, ‘furry’ new species of gorilla crab from China, researchers drew unlikely inspiration from the video game League of Legends.
Gothus teemo was named after the character Teemo thanks to its distinctive appearance and has drawn a lot of attention from fans of the franchise.
The new species is thought to have resembled a modern sandtiger shark (pictured).
Calling anything on this list a ‘new species’ is not accurate—rather, they are just new to published science. Nothing exemplifies this more than Palaeohypotodus bizzocoi, a long-extinct shark species that lived 65 million years ago, shortly after the fall of the dinosaurs.
What makes this discovery remarkable is that it was partially accidental. Find out how a 100-year-old box of teeth in Alabama led to the discovery of this ancient shark below.
Sometimes, it is the way in which a new species is discovered that makes it so special.
Such is the case for Schiedea waiahuluensis, a carnation species from Hawaii that is likely the first plant to be identified and collected using drone technology. Learn all about it below!
With its all-black colouration, Tylototriton gaowangjienensis, a crocodile newt from China, has drawn comparisons to Toothless from How to Train Your Dragon.
However, this alluring amphibian hides flashes of orange beneath its tail and toes! Find more pictures and information below.
Besides its adorable appearance, Hoplitis onosmaevae is remarkable due to its distribution. It is currently only known from a small region of the French Alps, and areas >2,000 km away in the mountains of Turkey and Iraq.
Another interesting aspect of Hoplitis onosmaevae is its specialised ecological niche: it is thought to only collect pollen from Onosma species. This narrow ecological niche makes it vulnerable to factors like climate change and changes in agricultural practices.
John L. Clark with Amalophyllon miraculum. Credit @phinaea on Instagram.
The discovery of Amalophyllon miraculum—in an area assumed to be a barren agricultural landscape of plant extinctions—represents an inspiration for biodiversity conservation. This “miracle” plant, as its name suggests, was found surviving in one of the small, isolated forest fragments that remain in the Centinela region of western Ecuador.
This spiky amphibian was discovered on Cerro Candelaria, a mountain in the Tungurahua province. The discovery of this new species in the upper Rio Pastaza watershed suggests this area might be a centre of rapid evolution for these fascinating frogs.
Entomologists and citizen scientists teamed up to discover this new species of flea beetle in the lush rainforests of Borneo. The discovery was made during a Taxon Expeditions trip, where non-scientist people got the chance to work alongside scientists to identify and describe new species.
What makes this discovery particularly exciting is the beetle’s size—it’s actually one of the largest among its relatives! Flea beetles that live in the leaf litter of tropical forests are typically much smaller, and as a result, we know very little about their ecology and diversity.
Discovered in the Red Sea, the ‘grumpy dwarf goby’ (Sueviota aethon) was published as a new species in ZooKeys. You can probably guess how it earned its name! This tiny fish, measuring less than 2 centimetres long, sports a permanent frown thanks to its large canines and fierce expression. Despite its small size, the grumpy dwarfgoby is thought to be a fearsome predator in its coral reef habitat.
Thismia malayanais a mycoheterotrophic plant, meaning it doesn’t photosynthesise. Instead, it acts as a parasite, stealing carbon resources from the fungi on its roots!
By stealing nutrients from fungi, it can thrive in the low-light conditions of dense forest understories where its highly specialised flowers are pollinated by fungus gnats and other small insects.
While the Tiputini velvet worm—Oroperipatus tiputini—may look friendly, it is an accomplished hunter that shoots a sticky substance from a pair of glands to trap its prey. This “living fossil” is a rare and unique invertebrate that evolved over 500 million years ago. The new species was discovered in the Ecuadorian Amazon at the Tiputini Biodiversity Station, which is part of the Yasuní Biosphere Reserve.
They say that life imitates art, and this new gecko species proves that to be true! Researchers in India have discovered a gecko with such a unique and beautiful colouration that they named it after painter Vincent van Gogh. The “Starry Night” gecko, or Cnemaspis vangoghi, was discovered in the Southern Western Ghats and stands out due to the male’s yellow head and forebody with light blue spots on the back, a striking combination reminiscent of the famous painting.
Yet another hectic year has passed for our team at Pensoft, so it feels right to look back at the highlights from the last 12 months, as we buckle up for the leaps and strides in 2025.
In the past, we have used the occasion to take you back to the best moments of our most popular journals (see this list of 2023 highlights from ZooKeys, MycoKeys, PhytoKeys and more!); share milestones related to our ARPHA publishing platform (see the new journals, integrations and features from 2023); or let you reminisce about the coolest research published across our journals during the year(check out our Top 10 new species from 2021).
In 2022, when we celebrated our 30th anniversary on the academic scene, we extended our festive spirit throughout the year as we dived deep into those fantastic three decades. We put up Pensoft’s timeline and finished the year with a New Species Showdown tournament, where our followers on (what was back then) Twitter voted twice a week for their favourite species EVER described on the pages of our taxonomic journals.
Spoiler alert: we will be releasing our 2024 Top 10 New Species on Monday, 23 December, so you’d better go to the right of this screen and subscribe to our blog!
As we realised we might’ve been a bit biased towards our publishing activities over the years, this time, hereby, we chose to present you a retrospection that captures our best 2024 moments from across the departments, and shed light on how the publishing, technology and project communication endeavours fit together to make Pensoft what it is.
In truth, we take pride in being an exponentially growing family of multiple departments that currently comprises over 60 full-time employees and about a dozen freelancers working from all corners of the world, including Australia, Canada, Belgium and the United Kingdom. Together, we are all determined to make sure we continuously improve our service to all who have trusted us: authors, reviewers, editors, client journals, learned societies, research institutions, project consortia and other external collaborators.
After all, great deeds are only possible when you team up with great like-minded people!
In 2024, at Pensoft, we were hugely pleased to see a significant growth in the published output at almost all our journals, including record-breaking numbers in both submissions and publications at flagship titles of ours, including the Biodiversity Data Journal, PhytoKeys and MycoKeys.
Later in 2024, our colleagues, who work together with our clients to ensure their journals comply with the requirements of the top scholarly databases before they apply for indexation, informed us that another two journals in our portfolio have had their applications to Clarivate’s Web of Science successfully accepted. These are the newest journal of the International Association of Vegetation Science: Vegetation and Classification, and Metabarcoding and Metagenomics: a journal we launched in 2017 in collaboration with a team of brilliant scientists working together at the time within the DNAquaNet COST Action.
In 2024, we also joined the celebrations of our long-time partners at the Museum für Naturkunde Berlin, whose three journals: Zoosystematics and Evolution, Deutsche Entomologische Zeitschrift and Fossil Record are all part of our journal portfolio. This year marked the 10th Open Access anniversary of the three journals.
In the meantime, we also registered a record in new titles either joining the Pensoft portfolio or opting for ARPHA Platform’s white-label publishing solution, where journal owners retain exclusivity for the publication of their titles, yet use ARPHA’s end-to-end technology and as many human-provided services as necessary.
Pensoft’s CEO and founder Prof. Dr. Lyubomir Penev with Prof. Dr. Marc Stadler, Editor-in-Chief of IMA Fungus and President of the International Mycological Association at the Pensoft booth at the 12th International Mycological Congress (August, the Netherlands).
Amongst our new partners are the International Mycological Association who moved their official journal IMA Fungus to ARPHA Platform. As part of Pensoft’s scholarly portfolio, the renowned journal joins another well-known academic title in the field of mycology: MycoKeys, which was launched by Pensoft in 2011. The big announcement was aptly made public at this year’s 12th International Mycological Congress where visitors of the Pensoft stand could often spot newly elected IMA President and IMA Fungus Chief editor: Marc Stadler chatting with our founder and CEO Lyubomir Penev by the Pensoft/MycoKeys booth.
On our end, we did not stop supporting enthusiastic and proactive scientists in their attempt to bridge gaps in scientific knowledge. In January, we launched the Estuarine Management and Technologies journal together with Dr. Soufiane Haddout of the Ibn Tofail University, Morocco.
Later on, Dr. Franco Andreone (Museo Regionale di Scienze Naturali, Italy) sought us with the idea to launch a journal addressing the role of natural history museums and herbaria collections in scientific progress. This collaboration resulted in the Natural History Collections and Museomics journal, officially announced at the joint TDWG-SPNHC conference in Okinawa, Japan in August.
Around this time, we finalised our similarly exciting journal project in partnership with Prof. Dr. Volker Grimm (UFZ, Germany), Prof. Dr. Karin Frank (UFZ, Germany), Prof. Dr. Mark E. Hauber (City University of New York) and Prof. Dr. Florian Jeltsch (University of Potsdam, Germany). The outcome of this collaboration is called Individual-based Ecology: a journal that aims to promote an individual-based perspective in ecology, as it closes the knowledge gap between individual-level responses and broader ecological patterns.
The three newly-launched journals are all published under the Diamond Open Access model, where neither access, nor publication is subject to charges.
As you can see, we have a lot to be proud of in terms of our journals. This is also why in 2024 our team took a record number of trips to attend major scientific events, where we got the chance to meet face-to-face with long-time editors, authors, reviewers and readers of our journals. Even more exciting was meeting the new faces of scientific research and learning about their own take on scholarship and academic journals.
Pensoft’s CEO and founder Prof. Dr. Lyubomir Penev welcomed editors at PhytoKeys to the Pensoft-PhytoKeys-branded booth at the XX International Botanical Congress in July 2024 (Spain).
We cannot possibly comment on Pensoft’s tech progress in 2024 without mentioning the EU-funded project BiCIKL (acronym for Biodiversity Community Integrated Knowledge Library) that we coordinated for three years ending up last April.
This 36-month endeavour saw 14 member institutions and 15 research infrastructures representing diverse actors from the biodiversity data realm come together to improve bi-directional links between different platforms, standards, formats and scientific fields.
Following these three years of collaborative work, we reported a great many notable research outputs from our consortium (find about them in the open-science project collection in the Research Ideas and Outcomes journal, titled “Towards interlinked FAIR biodiversity knowledge: The BiCIKL perspective”) that culminated in the Biodiversity Knowledge Hub: a one-stop portal that allows users to access FAIR and interlinked biodiversity data and services in a few clicks; and also a set of policy recommendations addressing key policy makers, research institutions and funders who deal with various types of data about the world’s biodiversity, and are thereby responsible to ensuring there findability, accessibility, interoperability and reusability (FAIR-ness).
Apart from coordinating BiCIKL, we also worked side-by-side with our partners to develop, refine and test each other’s tools and services, in order to make sure that they communicate efficiently with each other, thereby aligning with the principles of FAIR data and the needs of the scientific community in the long run.
During those three years we made a lot of refinements to our OpenBiodiv: a biodiversity database containing knowledge extracted from scientific literature, built as an Open Biodiversity Knowledge Management System, and our ARPHA Writing Tool. The latter is an XML-based online authoring environment using a large set of pre-formatted templates, where manuscripts are collaboratively written, edited and submitted to participating journals published on ARPHA Platform. What makes the tool particularly special is its multiple features that streamline and FAIRify data publishing as part of a scientific publication, especially in the field of biodiversity knowledge. In fact, we made enough improvements to the ARPHA Writing Tool that we will be soon officially releasing its 2.0 version!
OpenBiodiv – The Open Biodiversity Knowledge Management System
ARPHA Writing Tool 2.0
Amongst our collaborative projects are the Nanopublications for Biodiversity workflow that we co-developed with KnowledgePixels to allow researchers to ‘fragment’ their most important scientific findings into machine-actionable and machine-interpretable statements. Being the smallest units of publishable information, these ‘pixels of knowledge’ present an assertion about anything that can be uniquely identified and attributed to its author and serve to communicate a single statement, its original source (provenance) and citation record (publication info).
Nanopublications for Biodiversity
In partnership with the Swiss-based Text Mining group of Patrick Ruch at SIB and the text- and data-mining association Plazi, we brought the SIB Literature Services (SIBiLS) database one step closer to solidifying its “Biodiversity PMC” portal and working title.
Understandably, we spent a lot of effort, time and enthusiasm in raising awareness about our most recent innovations, in addition to our long-standing workflows, formats and tools developed with the aim to facilitate open and efficient access to scientific data; and their integration into published scholarly work, as well as receiving well-deserved recognition for their collection.
We just can’t stress it enough how important and beneficial it is for everyone to have high-quality FAIR data, ideally made available within a formal scientific publication!
🗨️Imagine if ALL these links were provided as hyperlinks within a #scholarly publication!
Pensoft’s CTO Teodor Georgiev talks about innovative methods and good practices in the publication of biodiversity data in scholarly papers at the First national meeting of the Bulgarian Barcode of Life (BgBOL) consortium (December, Bulgaria).
🤔What is a Data Paper?
👍 A means to describe a #dataset – like the ones on @GBIF – in a standardised, widely accepted #scientific article format.
👇🧵Highlights from @LyuboPenev's talk at the int'l symposium "#BiodiversityData in montane & arid Eurasia" in Kazakhstan 🇰🇿
Pensoft’s CEO and founder Prof. Dr. Lyubomir Penev presenting his “Data papers on biodiversity” talk at the “Biodiversity data in montane and arid Eurasia” symposium jointly organized by GBIF and by the Institute of Zoology of Republic of Kazakhstan (November, Kazakhstan).
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📸Today, at the @EASEeditors symposium, our @teodorpensoft gave a sneak peek into the AI-assisted tools at @ARPHAplatform we have been working on (e.g. Word -> JATS XML conversion) and the #ARPHA Writing Tool 2.0 (coming up in early 2025)!🎉
Pensoft’s CTO Teodor Georgiev presents new features and workflows currently in testing at the ARPHA Writing Tool 2.0 at the EASE Autumn Symposium 2024 (online event).Pensoft’s Head of Journal development, Marketing and PR Iva Boyadzhieva talks about Pensoft’s data publishing approach and innovations at the German Ecological Society 53rd Annual Conference (September, Germany).
Pensoft as a science communicator
At our Project team, which is undoubtedly the fastest developing department at Pensoft, science communicators are working closely with technology and publishing teams to help consortia bring their scientific results closer to policy actors, decision-makers and the society at large.
Ultimately, bridging the notorious chasm between researchers and global politics boils down to mutual understanding and dialogue.
Pensoft’s communication team attended COP16 (November 2024, Colombia) along with partners at the consortia of CO-OP4CBD, BioAgora and RESPIN: three Horizon Europe projects, whose communication and dissemination is led by Pensoft.
Throughout 2024, the team, comprising 20 science communicators and project managers, has been working as part of 27 EU-funded project consortia, including nine that have only started this year (check out all partnering projects on the Pensoft website, ordered from most recently started to oldest). Apart from communicating key outcomes and activities during the duration of the projects, at many of the projects, our team has also been actively involved in their grant proposal drafting, coordination, administration, platform development, graphic and web design and others (see all project services offered by Pensoft to consortia).
📸As leaders of the “Stakeholder engagement, comms & dissemination” WP at @BCubedProject, we joined the annual meeting to report on project branding, #scicomm & #DataManagement.
Naturally, we had a seat on the front row during many milestones achieved by our partners at all those 27 ongoing projects, and communicated to the public by our communicators.
Amongst those are the release of the InsectsCount web application developed within the Horizon 2020 project SHOWCASE. Through innovative gamification elements, the app encourages users to share valuable data about flower-visiting insects, which in turn help researchers gain new knowledge about the relationship between observed species and the region’s land use and management practices (learn more about InsectsCount on the SHOWCASE prroject website).
Another fantastic project output was the long-awaited dataset of maps of annual forest disturbances across 38 European countries derived from the Landsat satellite data archive published by the Horizon Europe project ForestPaths in April (find more about the European Forest Disturbance Atlas on the ForestPaths project website).
In a major company highlight, last month, our project team participated in COP29 in Baku, Azerbaijan with a side event dedicated to the role of open science and science communication in climate- and biodiversity-friendly policy.
Pensoft’s participation at COP29 – as well as our perspective on FAIR data and open science – were recently covered in an interview by Exposed by CMD (a US-based news media accredited to cover the event) with our science communicator Alexandra Korcheva and project manager Boris Barov.
You see, A LOT of great things worth celebrating happened during the year for us at Pensoft: all thanks to ceaselessly flourishing collaboration based on transparency, trust and integrity. Huge ‘THANK YOU!’ goes to everyone who has joined us in our endeavours!
Here’s to many more shared achievements coming up in 2025!
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Jake Lewis, an entomologist in the Environmental Science and Informatics Section at the Okinawa Institute of Science and Technology (OIST), is fascinated by weevils, a diverse group of beetles that includes many species with elephant trunk-like mouthparts (called a rostrum). Weevils provide various ecosystem services such as pollination and decomposition, but some species are serious pests known to decimate crop fields and timber forests.
OIST entomologist and Insect Collection Manager, Jake Lewis, searches for weevils on Okinawa Island, Japan. He and his collaborators collected weevils from Japan, Taiwan, Vietnam, and Malaysia, and discovered 12 new species. Photo credit: Merle Naidoo, OIST
Using x-ray microtomography, a 3D imaging technique that uses x-rays to visualize cross sections of the internal structure of objects, Lewis and his collaborators digitally removed scales that cover the cuticle of the weevils. They found that the underlying cuticle differs significantly between species and can therefore be used for taxonomic and classification purposes. Using this technique in combination with traditional light microscopy and DNA barcoding, they discovered, described, and named 12 new weevil species from Japan, Malaysia, Vietnam, and Taiwan. These species range from 1.5 – 3.0 mm in length and are comparatively quite small weevils.
Two of these new species are present in Japan: Aphanerostethus magnus (Oo-daruma-kuchikakushi-zoumushi) and Aphanerostethus japonicus (Nippon-daruma-kuchikakushi-zoumushi). One of these, Aphanerostethus japonicus, is also found in Yanbaru National Park, Okinawa. This is the first time x-ray microtomography has been used to remove obscuring scales to examine underlying differences in morphology for taxonomic purposes. The findings from this study have been published in the open-access journal ZooKeys.
Researchers have discovered, described, and named 12 new weevil species in Japan, Malaysia, Vietnam, and Taiwan. Aphanerostethus magnus and Aphanerostethus japonicus are found in Japan, with the latter also found in Yanbaru National Park, Okinawa. Photo credit: Lewis et al., 2024
The researchers showed that removing scales using x-ray microtomography reveals significant morphological differences between species, which cannot be easily observed using other methods. Consequently, this technique may gain more popularity as a tool for identifying new insect species, especially those covered in scales or debris.
Lewis, OIST’s Insect Collection Manager and lead author of the paper, examined specimens from collections in Canada, Germany, Japan, Malaysia, Taiwan, and the Netherlands. One of the primary goals was to investigate the use of x-ray microtomography as a tool in weevil taxonomy. The genus Aphanerostethus was poorly studied in the past, but many undescribed species were discovered in museum collections around the world, including the two new species from Japan.
X-ray microtomography generated 3D models of weevil species from the genus Aphanerostethus with the right elytron (forewing) removed, revealing differences in the length, width, and pattern of veins in the hindwing. A lateral view of the full body is shown below each closeup for reference. The red, blue, and yellow arrows indicate the base, midpoint, and apex of the hindwing, respectively. A: Aphanerostethus bifidus; B: A. decoratus; C: A. japonicus; D: A. magnus. Image credit: Lewis et al., 2024
Multiple methods to find new species
The researchers used traditional methods such as light microscopy and dissections to observe differences between species, including the scales along the elytra (back), leg spines, and the shape of the rostral canal (a canal that protects the rostrum). They also used DNA barcoding to analyze their genes and create a phylogenetic tree of eight of the species. Some species were not as easy to separate based on morphology alone, but as the gene sequences differ between species, the phylogenetic tree was informative and provided additional evidence of new species.
: Phylogenetic tree of eight Aphanerostethus species constructed by comparing genetic information to see how closely related different species are. This helped Lewis and his team verify their predictions about species classification by using DNA analysis instead of only physical traits. The colored, vertical bars represent different species and includes the two new species from Japan. Image credit: Lewis et al., 2024
Although the above methods are standard practice in taxonomy, the researchers’ use of X-ray microtomography was novel and was successfully used to examine the structure of not only the hidden cuticle, but also the hindwings. Aphanerostethus weevils have lost the ability to fly due to the gradual reduction of their hindwings, however the degree of reduction was shown to differ between species. Normally, specimens would have to be dissected to view the hindwings, but because x-ray microtomography allows for non-destructive examination of internal anatomy, it is invaluable when working with rare or precious specimens that cannot be dissected or altered.
X-ray microtomography generated 3D models of Aphanerostethus pronota with scales removed, revealing otherwise hidden differences in underlying puncture morphology A–C Aphanerostethus magnus D–F Aphanerostethus morimotoi. Image credit: Lewis et al., 2024
The presence of partially reduced wings in some species offers a fascinating glimpse into the ongoing process of evolutionary change: “Some species have almost completely lost their hindwings, while others still have non-functional half-wings with remaining vein patterns. The differing degrees in hindwing loss is not only useful for taxonomy and systematics, but also shows how different species within the same group can be at different stages of losing a historically highly important organ that played a crucial role in insect evolution,” Lewis explained.
Investing in Japan’s natural heritage
The discovery of new weevil species can be challenging for two main reasons. Firstly, weevils are incredibly diverse, making complete cataloging time consuming and tedious. Secondly, many weevil species are highly host-specific, may only inhabit very particular microhabitats, and may only be active for a short period of time as adults. For example, some species feed on a single tree species and may only occupy a certain part of a tree, such as the canopy. Furthermore, some species of weevils are strictly nocturnal and rarely observed during the daytime.
Episomus mori weevils. Photo credit: Jake H. Lewis
This extreme specialization and variation in natural history means that unless researchers investigate at night and day, across seasons, and focus on specific parts of many different plant species, they will inevitably overlook certain species.
Dr. Dan Warren, a research fellow at the Gulbali Institute for Applied Ecology and former leader of the Environmental Science and Informatics Section, emphasized the importance of investing in specimen collections: “These specimen collections are crucial for discovering new species and documenting biodiversity changes, both from human activities and natural cycles. They are essential tools for scientific research and conservation biology,” he stated. “Without proper support for them and the people who maintain them, we risk losing irreplaceable information on species and ecosystems, potentially before we even discover them.”
Euthycus weevils. Photo credit: Jake H. Lewis
“These new weevil species are part of Japan’s natural heritage, and although still poorly known ecologically, discovering and naming them is the first step towards an understanding of their biology,” Lewis added. Protected areas like Yanbaru National Park, home to the newly discovered A. japonicus, are essential to the protection of the island’s rich and endemic biodiversity.
Research article:
Citation: Lewis JH, Kojima H, Suenaga M, Petsopoulos D, Fujisawa Y, Truong XL, Warren DL (2024) The era of cybertaxonomy: X-ray microtomography reveals cryptic diversity and concealed cuticular sculpture in Aphanerostethus Voss, 1957 (Coleoptera, Curculionidae). ZooKeys 1217: 1–45. https://doi.org/10.3897/zookeys.1217.126626
Decades after it was first found in Japan, a species of crustacean with unique black-and-white coloring that resembles a panda has been confirmed to be new to science. Melitid amphipods are shrimp-like crustaceans found worldwide. The newly classified Melita panda — named after the charismatic mammal — was first found in the 1990s. Details of the discovery and morphological analysis were published in a ZooKeysarticle on 21 September.
A panda sitting on a rock outdoors, holding a bamboo branch
The discovery of the Melita panda highlights the importance of studying species taxonomy, which is the naming and classification of organisms, for conservation efforts. It is impossible to know if a species is in danger of disappearing if it hasn’t even been identified.
“Despite the fact that biodiversity conservation is a global issue, species diversity and other aspects of biodiversity are still not fully understood. As a first step toward species conservation, we conducted a taxonomic study of amphipod Crustacea, which boasts high species diversity around Japan,” said Ko Tomikawa, a professor at Hiroshima University’s Graduate School of Humanities and Social Sciences in Hiroshima, Japan.
A new species of amphipod with a unique panda pattern was found in the intertidal zone of the Japanese coast. Photo credit: Ko Tomikawa/Hiroshima University
Before the discovery of Melita panda, there were 63 known species of Melita amphipods, with 16 of those found in Japan. Melita panda was found in intertidal waters in Wakayama Prefecture, Japan. There are likely even more unidentified and undescribed species of Melita amphipods in Japan’s coastal waters.
“Study on the amphipod Crustacea in the coastal zone of Japan is lagging behind. In order to accurately assess species diversity, taxonomic studies are necessary. We hope the discovery of a new species of amphipod with the familiar coloring of the panda pattern will increase the public’s interest in biodiversity and taxonomy,” said Tomikawa.
A line drawing of Melita panda.
To identify the Melita panda, researchers did both a morphological study and molecular phylogeny using genomic DNA. The morphological description of Melita panda found unique features including its panda-like colors and other physical characteristics, while molecular phylogeny is used to identify how closely related the Melita panda is to other Melita amphipods. This information is used to create a phylogenetic tree or evolutionary tree of the known Melita amphipods. Phylogenetic trees are diagrams that show the evolutionary relationships between species.
A line drawing of Melita Panda‘s gnathopod 1.
The molecular phylogeny found that Melita panda is closely related to two other Melita amphipods, the Melita nagatai and Melita koreana. The panda-like coloring distinguishes Melita panda from these two other amphipods, along with other physical differences. Its gnathopods, which are claws that extend from the second thoracic segment, sit more forward than other Melita amphipods, covering another one of its appendages. Its setae, which are hair-like structures that look like bristles, are also distinguishable from other Melita amphipods. Together, the Melita nagatai, Melita koreana, and newly discovered Melita panda form a monophyletic group. This means they have a common evolutionary ancestor. In this case, it is the Melita hoshinoi.
Looking ahead, researchers will continue to study the Melita panda.
“Hopefully, a detailed study of the ecology and behavior of Melita panda will reveal the reason for its panda pattern,” said Tomikawa.
Beyond Melita panda, Tomikawa emphasized that there is still more to study.
“Further taxonomic studies on amphipods in uninvestigated areas are expected to lead to the discovery of additional new species. Continued taxonomic studies are expected to elucidate the biodiversity in the coastal environments of the Japanese archipelago and provide important basic data for species conservation,” he said.
Other contributors include Shigeyuki Yamato of Shirahama Katata in Wakayama, Japan, and Hiroyuki Ariyama at the Osaka Museum of Natural History in Osaka, Japan.
The Japan Society for the Promotion of Science KAKENHI grants supported this research.
Research article:
Tomikawa K, Yamato S, Ariyama H (2024) Melita panda, a new species of Melitidae (Crustacea, Amphipoda) from Japan. ZooKeys 1212: 267-283. https://doi.org/10.3897/zookeys.1212.128858
Happy World Animal Day! Today is all about celebrating the incredible species roaming our planet and promoting action for animal rights and welfare.
To mark this special day, we have collected some of our favourite animals published across Pensoft’s journal portfolio.
1. The ‘cute but deadly’ velvet worm
The Tiputini velvet worm (Oroperipatus tiputini). Credit: Roberto José León.
Look at those adorable little legs!
Oroperipatus tiputini is a velvet worm that researchers published as a new species in Zoosystematics and Evolution. These invertebrates are known as “living fossils” because they evolved over 500 million years ago, long before the dinosaurs.
The Tiputini velvet worm (Oroperipatus tiputini) adult and juvenile.
Despite its friendly appearance, the Tiputini velvet worm is an accomplished hunter that shoots a sticky substance from a pair of glands near its face to trap its prey!
Some creatures look like they belong to an era long ago.
But this one has only just been discovered! Found near American Samoa at a depth of 300 m, Nautilus samoaensis was one of three new nautilius species published in ZooKeys in 2023.
Underwater photos of living Nautilus samoaensis.
Sadly, these enigmatic molluscs with beautiful shells are facing population decline, and even extinction, due to the activity of unregulated fisheries.
Any ideas why Neopalpa donaldtrumpi was given its name?
Found in California, Arizona, and some areas of Mexico, this species was named days before Donald J. Trump became the the 45th President of the United States of America.
Neopalpa donaldtrumpi.
Researcher Dr Vazrick Nazari hoped that the fame around the blonde-haired moth would raise awareness for the importance of further conservation efforts for the species’ fragile habitat.
We think this fish may have taken the advice “keep your chin up” a bit too literally.
The longnosed stargazer (Ichthyscopus lebeck) looks like this for good reason – it buries itself in sand, with just its eyes visible, and leaps upwards to ambush prey.
Blue is a rare colour in nature, which is a shame because this tarantula from Thailand looks spectacular. The stylish spider sports iridescent streaks of neon colour on its legs, back, and mouthparts.
Chilobrachys natanicharum was already known in the pet trade as the electric blue tarantula, but a study published ZooKeys finally confirmed it as a unique species.
Tailless whip scorpion (Phrynus whitei). Credit: Fugus Guy via WikiMedia Commons.
Sorry about this one.
Phrynus whitei is an amblypygid – an order of arachnids also known as whip spiders or tailless whip scorpions. Despite its unsettling appearance, it is generally calm around humans and is non-venomous.
While we have enjoyed collecting a few of our favourite species featured in Pensoft journals, it is important to remember the value of every animal, regardless of cuteness or weirdness.
By supporting research and action that aims to protect our planet’s species, we can continue to enjoy our planet’s bizarre biodiversity that never fails to surprise and delight. Happy World Animal Day!
A newly identified wasp species, Chrysonotomyia susbelli, has been discovered in Houston, Texas, marking the 18th new species identified by Rice University’s Scott Egan and his research team since 2014. The discovery, the fourth wasp species found on the university grounds in seven years, reveals the hidden world of parasitoid wasps and the intricate ecosystems that thrive outside our doors.
Chrysonotomyia susbelli. Photo credit: Rice University
Chrysonotomyia susbelli is a parasitoid wasp, about 1 millimeter long, that emerges from galls, or tumorlike growths created by the gall wasp Neuroterus bussae found on southern live oak leaves. The galls serve as microhabitats within which larvae feed, develop and pupate. The research team’s study was published in the journal ZooKeys on Sept. 18.
Scott Egan, left, and Brendan O’Loughlin, right. Photo of Egan by Brandon Martin/Rice University. Photo of O’Loughlin courtesy of Rice University.
“Chrysonotomyia susbelli represents the sixth species of its genus described from North America and the first globally known to parasitize cynipid gall wasps,” said Egan, an associate professor of ecology and evolutionary biology.
The wasp was discovered and named by Brendan O’Loughlin, a Rice senior and the study’s first author. “The wasp’s goldenrod color is almost identical to the official colors of Wiess College, my residential college,” O’Loughlin said.
To confirm the uniqueness of the species, the research team conducted a genetic analysis and a detailed study of the wasp’s physical features under a microscope. Its investigation also included a review of the historical literature to ensure that the species had not been previously described.
Chrysonotomyia susbelli. Photo credit: Rice University
This research was complemented by DNA barcode data and observations of the wasp’s natural history, including host associations and a unique leaf-scanning behavior exhibited by female wasps. The researchers also modified the identification key of New World members, groups of species found exclusively in the Americas, to incorporate this new species.
Egan emphasized the importance of studying local biodiversity. “You don’t have to travel to a distant rainforest to find new and beautiful things — you just have to step outside and look,” he said.
The discovery hints at a previously unexplored ecological niche involving Chrysonotomyia parasitoids, cynipid gall wasps, and oaks, suggesting that there may be many more undiscovered species within this system.
“Generations of Chrysonotomyia susbelli have likely lived unnoticed on the oaks of Rice University since its founding,” Egan said.
Co-authors of the study include Pedro FP Brandão-Dias, Ph.D. graduate of ecology and evolutionary biology at Rice and current postdoctoral scholar at the University of Washington, and Michael Gates, parasitoid wasp specialist of the U.S. Department of Agriculture’s Systematic Entomology Laboratory at the Smithsonian National Museum of Natural History.
Originally published by Rice University. Republished with permission.
Research article:
O’Loughlin B, Brandão-Dias PFP, Gates MW, Egan SP (2024) Description of a new species of Chrysonotomyia Ashmead from Houston, Texas, USA (Hymenoptera, Chalcidoidea, Eulophidae). ZooKeys 1212: 241-254. https://doi.org/10.3897/zookeys.1212.127537
Despite its small size of less than 2 centimeters, the grumpy dwarfgoby has a surprisingly menacing appearance. Its large canines and fierce expression give it a rather intimidating look for such a small fish.
Lucía Pombo-Ayora, who gave the species its grumpy common name, comments on its distinctive appearance: “I imagine in its own tiny world, it is a fearsome predator. Its grumpy expression and large canines certainly make it look the part, despite its small size.”
The species’ bright red coloration actually helps it blend into its natural habitat. It can be found on the walls and overhangs of coral reefs, covered in red coralline algae. There, it lives in small holes and crevices, using its large canines to capture tiny invertebrates. The grumpy dwarfgoby appears to be a relatively rare species, which is likely why it remained undiscovered until now.
The researchers found the first specimens in the Farasan Banks in Saudi Arabia, with additional specimens later found near Thuwal in the Red Sea. It was researcher Viktor Nunes Peinemann who first found it during a diving expedition to explore the coral reef fish diversity. Initially, the researchers thought they had rediscovered the fiery dwarfgoby, Sueviota pyrios, which is only known from a single specimen collected in 1972. However, upon closer examination, they realized they were dealing with an entirely new, undescribed species.
“The ongoing discovery of distinctive new species like this grumpy dwarfgoby shows how much biodiversity remains undiscovered in the Red Sea,” Viktor Nunes Peinemann explains. “This is concerning given the recent environmental changes in the region. In some cases, species could go extinct before we even describe them.”
The region is known for its high levels of endemic species and the Grumpy dwarf goby is another addition to this unique fauna. Much of the Red Sea has experienced major disturbances resulting from climate change in recent years, including widespread coral bleaching and mortality. The fact that new species are still being discovered in this rapidly changing environment highlights the urgency of continued research and conservation efforts, the researchers believe.
They have published their discovery in the open-access scientific journal ZooKeys.
Photos by Viktor Nunes Peinemann
Research article:
Nunes Peinemann V, Pombo-Ayora L, Tornabene L, Berumen ML (2024) The Grumpy dwarfgoby, a new species of Sueviota (Teleostei, Gobiidae) from the Red Sea. ZooKeys 1212: 17-28.https://doi.org/10.3897/zookeys.1212.121135
