Tag: ecology

Saving the Underworld: Clarifying the subterranean fauna classification for improved conservation

Inevitably, many habitats, including the particularly vulnerable subterranean ones, will continue being erased from our planet as a result of human activities and interests. The challenge is to protect the ones that are the sole habitats to certain organisms, so that their species are safe from extinction. Hence, it is essential that the distribution of every each one of them is clearly defined.

Brazilian scientists Prof. Eleonora Trajano, Universidade Federal de São Carlos, and Prof. Dr. Marcelo Rodrigues de Carvalho, Universidade de São Paulo, discuss the current classification system, its application and complexities in a paper published in the open access Subterranean Biology.

Nowadays, there are three categories of subterranean fauna accepted. Troglobites live exclusively underground and are usually characterised with reduced or lacking eyes and pale or transparent colors; troglophiles may live both in caves and on the surface, with individuals commuting between these habitats and promoting genetic interchange between subterranean and surface populations; trogloxenes use caves regularly, but must leave them periodically in order to complete their life cycle.

Throughout the years, many alterations and subdivisions have been applied to the classification used when determining whether a cave organism belongs exclusively to the subterranean habitat, or not, before concluding these three groups, also known as the Schiner-Racovitza system. It is important to separate them properly, since the destruction of a habitat to an endemic troglobite, for instance, would immediately wipe out its whole species, as it would be impossible for the animals to move away.

However, many historic publications do not feature enough details about the described species’ distribution, nor identification of the used classification, so that the information is unreliable. Furthermore, there have been times, when people have been even afraid to survey the underground habitats, led by beliefs and associations linking caves to the “World of the Dead”.

In their paper, the authors conclude that the only way to define the species status of subterranean organisms with certainty is to study each species’ dynamics over a period of at least three years, since animals may migrate on a seasonal and/or non-seasonal basis. Also, scientists need to study thoroughly the area outside the surveyed cave, while testing for sampling sufficiency at all times.

“When employing classifications of subterranean organisms, especially for conservation purposes, these conditions should be checked for reliability of the status attributed to them,” say the authors. “Misplacing these organisms within the Schiner-Racovitza categories impairs the efficiency of such policies.”

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Original source:

Trajano E, Carvalho MR (2017) Towards a biologically meaningful classification of subterranean organisms: a critical analysis of the Schiner-Racovitza system from a historical perspective, difficulties of its application and implications for conservation. Subterranean Biology 22: 1-26. https://doi.org/10.3897/subtbiol.22.9759

Bee species with little known nesting-behavior observed to use plastic instead of leaves

Little is known about the nesting activities of some lineages of megachiline bees. Dr. Sarah Gess, affiliated with both Albany Museum and Rhodes University, South Africa, and Peter Roosenschoon, Conservation Officer at the Dubai Desert Conservation Reserve, United Arab Emirates, made use of their earlier observations gathered during a survey on flower visitation in the spring of 2015, to fill some gaps in the knowledge of of three species from such lineages.

Among their findings, published in the open access Journal of Hymenoptera Research, is a curious instance of a bee attempting to build brood cells using green pieces of plastic. Having examined two nests of the leafcutter bee species Megachile (Eurymella) patellimana, they report that one of the females nested in burrows in compacted sandy ground beneath a plant, and the other – in the banks of an irrigation furrow.

However, while the former was seen carrying a freshly cut leaf, the latter seemed to have discovered a curious substitute in the form of green plastic. Later on, upon checking the nest, the researchers found that the phenomenon they had observed was no isolated incident – at least six identical pieces of narrow, tough, green plastic were grouped together in an apparent attempt to construct a cell. It turns out that the bee had been deliberately cutting off approximately 10-milimetre-long pieces with its large and strong toothed mandibles, before bringing them back to the nest.

“Although perhaps incidentally collected, the novel use of plastics in the nests of bees could reflect ecologically adaptive traits necessary for survival in an increasingly human-dominated environment,” the authors quote an earlier study.

The two studied mason bee species (Megachile (Maximegachile) maxillosa and Pseudoheriades grandiceps) were seen to construct their nests using a mixture of resin and sand in pre-existing cavities, such as trap-nests, above the ground. The researchers note that resin is a common nest-building material among numerous species of mason bees, also known as resin bees. Previously, it has been suggested that apart from making the nest waterproof, the plant secretions may contain substances that fend off parasites.

The authors’ earlier paper exploring the flower visitation by bees and wasps in the Dubai Desert Conservation Reserve is also published in the open-access Journal of Hymenoptera Research.

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Original source:

Gess SK, Roosenschoon PA (2017) Notes on the nesting of three species of Megachilinae in the Dubai Desert Conservation Reserve, UAE. Journal of Hymenoptera Research 54: 43-56. https://doi.org/10.3897/jhr.54.11290

New species of moth named in honor of Donald Trump ahead of his swearing-in as president

Days before Donald J. Trump steps forward on the Inaugural platform in Washington to assume the role of the 45th President of the United States of America, evolutionary biologist and systematist Dr. Vazrick Nazari named a new species in his honour. The author, whose publication can be found in the open access journal ZooKeys, hopes that the fame around the new moth will successfully point to the critical need for further conservation efforts for fragile areas such as the habitat of the new species.

While going through material borrowed from the Bohart Museum of Entomology, University of California, Davis, Dr. Vazrick Nazari stumbled across a few specimens that did not match any previously known species. Following thorough analysis of these moths, as well as material from other institutions, the scientist confirmed he had discovered the second species of a genus of twirler moths.

While both species in the genus share a habitat, stretching across the states of California, USA, and Baja California, Mexico, one can easily tell them apart. The new moth, officially described as Neopalpa donaldtrumpi, stands out with yellowish-white scales present on the head in adults. In fact, it was in these scales that the author found an amusing reference to Mr. Trump’s hairstyle and turned it into an additional justification for its name.

Donald Trump’s flying namesake is announced only a month following the recently described species of basslet named after predecessor President Barack Obama, also published in ZooKeys. The fish is only known from coral reefs in the Papahānaumokuākea Marine National Monument, Northwestern Hawaii, a nature reserve which the 44th President of the United States of America expanded to become the largest protected marine area in the world.

Being a substantially urbanized and populated area, the habitat of N. donaldtrumpi is also under serious threat.

“The discovery of this distinct micro-moth in the densely populated and otherwise zoologically well-studied southern California underscores the importance of conservation of the fragile habitats that still contain undescribed and threatened species, and highlights the paucity of interest in species-level taxonomy of smaller faunal elements in North America,” says discoverer Dr. Vazrick Nazari. “By naming this species after the 45th President of the United States, I hope to bring some public attention to, and interest in, the importance of alpha-taxonomy in better understanding the neglected micro-fauna component of the North American biodiversity.”

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Original source:

Nazari V (2017) Review of Neopalpa Povolný, 1998 with description of a new species from California and Baja California, Mexico (Lepidoptera, Gelechiidae). ZooKeys 646: 79-94. https://doi.org/10.3897/zookeys.646.11411

Robust rattan palm assessed as Endangered, new Species Conservation Profile shows

An African rattan palm species has recently been assessed as Endangered, according to the IUCN Red List criteria. Although looking pretty robust at height of up to 40 m, the palm is restricted to scattered patches of land across an area of 40 km². It grows in reserves and conservation areas in Ghana and a single forest patch in Côte d’Ivoire. Its Species Conservation Profile is published in the open access Biodiversity Data Journal by an international research team, led by Thomas Couvreur, Institut de Recherche pour le Développement (IRD), France, in collaboration with the University of Yaoundé, Cameroon, Royal Botanic Gardens, Kew, UK, and the Conservatoire et jardin botaniques, Geneva, Switzerland.

The rattan palm is confined to moist evergreen forests with high rainfall, located at 100 to 200 meters above sea level. The species is poorly known, yet it is likely very rare judging from the limited amount of forest habitat remaining across its range. Furthermore, the known populations are isolated from each other by large distances, which makes them particularly vulnerable.

Even though there are gaps of knowledge concerning the rattan palm species, the research team conclude that it is most likely currently declining, due to habitat loss, fragmentation and over-harvesting. Often mistaken for a sister species, commonly used in trade, the stems of the endangered species are largely used in furniture production. When longitudinally split into ribbons, the canes are also used as ropes for thatching, for making baskets and sieves, and to make traps.

“As with most African rattan species, there is inadequate information on the international trade, but it is likely to be negligible,” explain the scientists.

“Conservation measures are urgently needed to protect the habitat of this species and to control the unsustainable harvest of the stems. A promising solution might be sustainable cultivation of rattans to avoid the exploitation of wild populations,” suggests Ariane Cosiaux (IRD), the lead author of the study currently based in Cameroon.

With their present paper, the authors make use of a specialised novel publication type feature, called Species Conservation Profile, created by Biodiversity Data Journal, to provide scholarly credit and citation for the IUCN Red List species page, as well as pinpoint the population trends and the reasons behind them.

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Original source:

Cosiaux A, Gardiner L, Ouattara D, Stauffer F, Sonké B, Couvreur T (2017) An endangered West African rattan palm: Eremospatha dransfieldii. Biodiversity Data Journal 5: e11176. https://doi.org/10.3897/BDJ.5.e11176

New open access journal Rethinking Ecology publishes novel ideas under Pensoft’s imprint

Needless to say, it is through sharing new ideas and hypotheses that critical issues such as climate change and biodiversity loss can be addressed. However, few scientists are currently in a position to do so, because publishing bold ideas in peer-reviewed journals is very difficult, especially for those who are not world-renowned scientists in their field. At the same time, scientists sharing novel ideas that have not been published yet, carry the risk of being ‘scooped’. This is probably a scientist’s worst nightmare: seeing someone else publish the idea they have been working on. In this context, many innovative ideas are kept secret and it can take years before they are made available to the scientific community.

This is the niche that the novel open access peer-reviewed journal Rethinking Ecology aims to fill by providing a platform for forward thinking and publication of novel ideas in all aspects of ecology, evolution and environmental science.

Adding to its innovative nature, Rethinking Ecology joins the modern technologically advanced Pensoft journals published on next-generation platform ARPHA (abbreviation standing for Authoring, Reviewing, Publishing, Hosting and Archiving). Not only is the platform to provide fast-track and convenient publishing for the authors, reviewers and editors in Rethinking Ecology, as it takes care of a manuscript through all stages from authoring and reviewing to dissemination and archiving, but it is user-friendly to the readers as well, who enjoy publications in three formats (PDF, XML, HTML) and full of semantic enhancements.

The innovative journal aims to encourage all scientists, regardless of their seniority, publication track record, gender, or country of origin, to publish perspective papers, so that they are put in the open for peers to discuss and build on, while credit is given where credit is due. Publishing these ideas early also draws attention from the scientific community, potential collaborators and potential funders. To further avoid potential bias, Rethinking Ecology implements double-blind peer review, with the journal supporting the notion that it is the content of a manuscript that matters. Moreover, reviewers will not be asked for a formal recommendation. Instead, they will comment and evaluate the work against a set of specific questions. Thus, each paper ends up with a score on Novelty, Feasibility, Scholarship and Literacy, so that only perspective papers with an emphasis on novel hypotheses and bold ideas are accepted for publication.

Another innovative feature applied in the new journal is an Author Contribution Index (ACI), meaning that each publication will include a pie chart pointing to the contribution of each of the authors, estimated in percentage. This is the editors’ answer to the so-called ‘guest authorship’ (i.e. inclusion of authors who did not significantly contribute to the work).

It is no coincidence that Rethinking Ecology has a spiral-shaped unfurling fern leaf as a logo. Called Koru in the language of the indigenous Polynesian people of New Zealand – Māori, it symbolises novelty, new life and new beginning, as well as perpetual movement.

“Each publication in Rethinking Ecology can be seen as the beginning of life for a new idea and its metaphorical unfurling as it reaches out to the scientific community,” explain the journal editors in their very first Editorial at Rethinking Ecology.

“We see Rethinking Ecology as an incubator for novel ideas, and a catalyst for new thinking,” says the journal’s Editor-in-Chief Dr Stephane Boyer, Unitec Institute of Technology, New Zealand.

“In a world where scientific publications are increasingly open source and immediately available, it makes no sense to keep our most innovative ideas hidden from the world for years while we secretly test them,” he elaborates. “Bold ideas and new hypotheses need to be shared, they may or may not turn into world-changing paradigm shifts, but they all have the potential to contribute to new thinking.”

“I am pleased to welcome a groundbreaking journal such as Rethinking Ecology to the Pensoft family, which has already built a nice and extensive portfolio of innovations in scholarly publishing,” says Pensoft’s founder and CEO Prof. Lyubomir Penev. “Seeing genuine ideas and hypotheses yet to be tested, and possibly, yet to revolutionise the ecological science is certainly a thing worthy of eager anticipation.”

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About ARPHA:

ARPHA is the first end-to-end journal publishing solution that supports the full life cycle of a manuscript, from authoring through submission, peer review, publication and dissemination. With ARPHA, journals and publishers enjoy a complete set of services, which enable tailored, technologically advanced publishing solutions. The platform enables a variety of publishing models through a number of options for branding, production and revenue models to choose from.

Claims that declines of pollinator species richness are slowing down in Europe revisited

Having conducted a thorough interpretation of the results of a recent study that inferred decrease in the biodiversity loss among pollinators across Europe, Dr Tom J. M. Van Dooren reveals that this conclusion cannot in fact be drawn. It is only supported for the bee fauna in the Netherlands. His study is published in the open access journal Nature Conservation.

Changes in pollinator abundances and diversity are of major concern. Pollinator diversity is quantified by their species richness: the number of species from a specific taxonomic group of pollinating animals present at a given time in a given area. A recent study, adopted in the recent UN IPBES Pollination Report draft summary, inferred that pollinator species richnesses are decreasing more slowly in recent decades in several taxonomic groups and European countries.

However, Dr Tom J. M. Van Dooren, affiliated with both Naturalis Biodiversity Center, the Netherlands, and the Institute of Ecology and Environmental Sciences of Paris, France, has now published his own study to show in detail the inaccuracies that the earlier conclusion has been based on.

Among other points, the scientist notes that the earlier study contained no explicit statistical comparisons between species richness changes in different periods. The earlier study also treated richness changes at country level and small spatial resolution as equivalent, while they probably represent different processes.

“Plants in Great Britain at the smallest spatial scales suggest a reduced rate of changes, but the results for larger spatial scales are not significant,” he illustrates. “The same holds for butterflies in the Netherlands.”

Dr Tom J. M. Van Dooren only finds support in the results of the earlier publication for a decelerating decline in bumblebees and other wild bees in the Netherlands. “This is in fact one taxon, the bees Anthophila, in a single country, the Netherlands”, he notes.

“The lack of robustness points again to the possibility that results found in the data can be due to changes in the shapes of species accumulation curves,” Dr Tom J. M. Van Dooren summarises. “Therefore the status of the statement on decelerating declines in the Pollination Report should be adjusted accordingly.”

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Original source:

Van Dooren TJM (2016) Pollinator species richness: Are the declines slowing down? Nature Conservation 15: 11-22. doi: 10.3897/natureconservation.15.9616

Photo credit:

Aiwok, Wikimedia Commons, CC BY-SA 3.0 (http://creativecommons.org/licenses/by-sa/3.0)

Living together in mud: New bivalve species dwelling on a sea cucumber discovered in Japan

Most bivalves live in sand or mud or attached to rock surface. However, a new bivalve species described from Japan lives on a sea cucumber.

Ryutaro Goto, postdoctoral fellow in Museum of Zoology and Department of Ecology and Evolutionary Biology, University of Michigan, and Hiroshi Ishikawa, amateur malacologist in Japan, have their paper, describing the new species, published in the open access journal ZooKeys.

The new species, named Borniopsis mortoni(Galeommatoidea), was discovered in mudflats at the mouth of the Souzu River, southwestern Shikoku Island, Japan.

This bivalve has tiny brownish shells (up to 4.1 mm in length). The species lives attached by both its foot and byssal threads to the body surface of the earthworm-like sea cucumberPatinapta ooplax (Synaptidae). Individuals of B. mortoni are often found on the same host, yet sometimes there could be more than 10 individuals existing side-by-side.

The new species is dedicated to a famous British malacologist Brian Morton, emeritus professor of University of Hong Kong. He has described many interesting Pseudopythina species from mudflats in Hong Kong, now assigned to the genus Borniopsis.

Host sea cucumbers burrow in mudflats. Most likely, the B. mortoni bivalve uses the host burrows as shelter from predators.

The new species is one of the smallest species in this genus. With the burrow of the host sea cucumber being very narrow, the small body size of B. mortoni is probably a corresponding adaptation.

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Original source:

Goto R, Ishikawa H (2016) Borniopsis mortoni sp. n. (Heterodonta, Galeommatoidea, Galeommatidae sensu lato), a new bivalve commensal with a synaptid sea cucumber from Japan. ZooKeys 615: 33-45. doi: 10.3897/zookeys.615.8125

Bee populations expanded during global warming after the last Ice Age

The Australian small carpenter bee populations appear to have dramatically flourished in the period of global warming following the last Ice Age some 18,000 years ago.

The bee species is found in sub-tropical, coastal and desert areas from the north-east to the south of Australia. Researchers Rebecca Dew and Michael Schwarz from the Flinders University of South Australia teamed up with Sandra Rehan, the University of New Hampshire, USA, to model its past responses to climate change with the help of DNA sequences. Their findings are published in the open access Journal of Hymenoptera Research.

“You see a rapid increase in population size from about 18,000 years ago, just as the climate began warming up after the last Ice Age,” says lead author Rebecca Dew. “This matches the findings from two previous studies on bees from North America and Fiji.”

“It is really interesting that you see very similar patterns in bees around the world,” adds Rebecca. “Different climate, different environment, but the bees have responded in the same way at around the same time.”

In the face of future global warming these finding could be a good sign for some of our bees.

However, the news may not all be positive. There are other studies showing that some rare and ancient tropical bees require cool climate and, as a result, are already restricted to the highest mountain peaks of Fiji. For these species, climate warming could spell their eventual extinction.

“We now know that climate change impacts bees in major ways,” says Rebecca, “but the challenge will be to predict how those impacts play out. They are likely to be both positive and negative, and we need to know how this mix will unfold.”

Bees are major pollinators and are critical for many plants, ecosystems, and agricultural crops.

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Original source:

Dew RM, Rehan SM, Schwarz MP (2016) Biogeography and demography of an Australian native bee Ceratina australensis (Hymenoptera, Apidae) since the last glacial maximum. Journal of Hymenoptera Research 49: 25-41. doi: 10.3897/JHR.49.8066

From a bulletin to a modern open access journal: Italian Botanist in Pensoft’s portfolio

Established in the distant 1888, the Italian Botanical Society has gone a long way towards publishing its achievements and research. Originated as a bulletin within an Italian journal, they have been growing ever since to now form a new international journal in its own right. Covering both Italian and international research in botany and mycology, the online open access journal Italian Botanist, published by Pensoft, is now officially launched via its first papers.

Although what was later to become Italian Botanist, published its first issue as an independent journal, called Informatore Botanico Italiano in 1969, the publications were still rather bulletin-style. It consisted of a mixture of administrative and scientific proceedings of the Society, the yearbook of the members, as well as scientific notes.

Nevertheless, such a major transition has been set to change everything fundamentally. Establishing its name, the journal started picking up, so that it was not long before the scientific contributions were prevailing. Impressively, for the Society’s centenary the journal published a celebratory 331-page contribution.

Gradually, its scope was expanded to cover several scientific fields. It hosted several themed columns, including cytotaxonomic contributions on the Italian flora, relevant new floristic records for Italy, conservational issues concerning the Italian flora and mycology.

However, the Directive Council of the Italian Botanical Society has not seemed to be ready to give up on their journal’s evolution. Last year, the botanists decided that they need to transform the journal to an an online, open access journal written in English and called Italian Botanist, in order to boost the scientific value and international visibility of Informatore Botanico Italiano.

Under the name Italian Botanist, the journal has now joined Pensoft’s portfolio of peer-reviewed open access journals, all of which take advantage of the advanced technologies and innovations developed by the publisher.

The new journal’s scope ranges from molecular to ecosystem botany and mycology. The geographical coverage of Italian Botanist is specially focused on the Italian territory, but studies from other areas are also welcome.

Staying faithful to its spirit and philosophy, it keeps its column-format, with each issue to contain five columns, namely Chromosome numbers for the Italian flora, Global and Regional IUCN Red List Assessments, Notulae to the Italian flora of algae, briophytes, fungi and lichens, Notulae to the Italian native vascular flora and Notulae to the Italian alien vascular flora.

“Our hope is that this renewed version of the journal will serve the Italian – and foreign – botanical community more efficiently and provide readers worldwide with an easier access to knowledge concerning the Italian flora,” says Italian Botanist‘s Editor-in-Chief Lorenzo Peruzzi.

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Original source:

Peruzzi L, Siniscalco C (2016) From Bullettino della Società Botanica Italiana to Italian Botanist, passing through Informatore Botanico Italiano. A 128 years-long story. Italian Botanist 1: 1-4. doi: 10.3897/italianbotanist.1.8646

Two brand new dung beetle species from montane grazing sites and forests in Mexico

While carrying out a biodiversity study, a Mexican-Italian research team discovered three new dung beetle species in montane forests disturbed by livestock grazing. Mexico has been a mecca for naturalists, and its dung beetle species are among the best known in the world. This is why the discovery of new species there is noteworthy. The present study, published in the open-access journal ZooKeys, describes two of them and highlights the need to further explore the biodiversity of disturbed ecosystems.

Mexico is a country that holds a vast number of creatures and ecosystems. There is in fact a fascinating phenomenon: tropical forests that have close affinities with South America co-occurring with temperate and arid areas shared with North America. Thus, Mexico has been particularly attractive to explorers ever since the 19th century.

A group of animals that has woken up a special interest for studies in Mexico is the so-called ‘dung beetles’. As their name suggests, dung beetles are insects that feed mainly on mammal faeces.

For decades, an international research team, led by Dr Gonzalo Halffter, has studied dung beetles across the world, especially in Mexico. As a consequence, the Mexican species are some of the best-known. However, Dr Halffter and his team are not interested exclusively in dung beetles, but also in evolutive phenomena, the effects of land-use change, ecosystems modification by human activities, and conservation biology. Such concerns seem to be of particular importance now that the terrestrial ecosystems in Mexico have been severely destroyed and disturbed by people.

Livestock is one of the major drivers of biodiversity loss worldwide, which makes the present discovery particularly impressive. With at least 58% of the area of Mexico occupied with livestock farming, dung beetles are essential in cleaning up. While studying their diversity at conserved forests and cattle grazing sites across the mountains of Mexico, the researchers found some new species of dung beetles.

The first to discover these new dung beetles was Victor Moctezuma, a student of Dr Gonzalo’s at the Instituto de Ecología of Mexico.

“I was carrying out sampling for my Masters Degree studies, but I had no idea that new dung beetles could be found in a forest that is disturbed by human activities, such as livestock grazing and land-use change,” recalls Moctezuma. “So I was really surprised when I discovered three dung beetle species.” One of these species has already been published.

Apart from the two new dung beetles, formally called Onthophagus clavijeroi and Onthophagus martinpierai, the present paper also provides theories about the current distributions of these insects across the Mexican mountains and their putative evolutive relationships. As a whole, the study highlights the importance of disturbed forest for species discovery and conservation.

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Original source:

Moctezuma V, Rossini M, Zunino M, Halffter G (2016) A contribution to the knowledge of the mountain entomofauna of Mexico with a description of two new species of Onthophagus latreille, 1802 (Coleoptera, Scarabaeidae, Scarabaeinae). ZooKeys 572: 23-50. doi:10.3897/zookeys.572.6763