Until recently, Orthacanthus gracilis could have been considered the “John Smith” of prehistoric shark names, given how common it was.
Three different species of sharks from the late Paleozoic Era – about 310 million years ago – were mistakenly given that same name, causing lots of grief to paleontologists who studied and wrote about the sharks through the years and had trouble keeping them apart.
But now Loren Babcock, a professor of earth sciences at The Ohio State University, has finished the arduous task of renaming two of the three sharks – and in the process rediscovered a wealth of fossil fishes that had been stored at an Ohio State museum for years but had been largely forgotten.
Loren Babcock with a collection of Orton Museum’s fossil fishes, including several from John Newberry. Photo by The Ohio State University
In order to change the names, Babcock had to go through a process governed by the International Commission on Zoological Nomenclature (ICZN). He had to document the need to change the names, propose new names and submit them to an ICZN-recognized journal for peer review and then have the ICZN officially accept the names.
Tooth of the shark Orthacanthus lintonensis. The tooth is about 13 mm long.
“It was one of the most complex naming problems we have had in paleontology, which is probably one reason no one attempted to fix it until now,” Babcock said.
“A lot of scientists in the field have written, thanking me for doing this. We are all happy it is finally done,” he said.
One measure of the impact the renaming has had on the field: Babcock’s paper announcing the new names was just published in the journal ZooKeys on Jan. 8, but it has already been referenced on seven different Wikipedia pages.
The original Orthacanthus gracilis fossil was found in Germany and named in 1848. That species gets to keep the name.
The remaining two fossils were found in Ohio and named by the famous American paleontologist John Strong Newberry in 1857 and 1875.
Portrait of John Strong Newberry
Babcock renamed the Ohio sharks Orthacanthus lintonensis and Orthacanthus adamas, both based on the name of the place where they were originally found.
Why did Newberry give the two Ohio sharks the same name?
“He probably just forgot. It was nearly 20 years between the time the two species were named,” Babcock said.
And as far as giving it the same name as a German species: “In those days, it was really difficult to search for names that were already in existence – they did not have the internet.”
The sharks themselves were fascinating creatures, Babcock said. They were large and creepy, nearly 10 feet long, and looked more like eels than present-day sharks, with long dorsal fins extending the length of their backs and a peculiar spine extending backward from their heads.
They lived in the fresh or brackish water of what are known as “coal swamps” of the late Carboniferous Period (323-299 million years ago) during the late Paleozoic Era. They belong to an extinct group of chondrichthyans (which includes sharks, skates and rays) called the xenacanthiforms.
Dorsal spine of Orthacanthus adamas. The spine is about 71 mm long.
Newberry was for a time the chief geologist at the Geological Survey of Ohio. He played an important role in the early growth of what is now the Orton Geological Museum at Ohio State.
Babcock, who is the current director of the Orton Museum, decided to begin the renaming process after reviewing the museum’s collection. He was surprised to see how many fossils the museum had that had been collected by Newberry, including the two prehistoric sharks.
Through the years, scientists have written about how various Newberry specimens had been lost. It turns out many had been at the Orton Museum.
“No museum has a larger collection of Newberry’s fossils except for the American Museum of Natural History in New York City,” Babcock said.
“Not a lot of people are aware of that – I did not even know the extent of our collection. If you’re looking for part of the Newberry collection and can’t find it in the American Museum of Natural History, it is probably going to be here.”
Research article:
Babcock LE (2024) Replacement names for two species of Orthacanthus Agassiz, 1843 (Chondrichthyes, Xenacanthiformes), and discussion of Giebelodus Whitley, 1940, replacement name for Chilodus Giebel, 1848 (Chondrichthyes, Xenacanthiformes), preoccupied by Chilodus Müller & Troschel, 1844 (Actinopterygii, Characiformes). ZooKeys 1188: 219-226. https://doi.org/10.3897/zookeys.1188.108571
News piece originally published by the Ohio State University. Republished with permission.
There are about 25,000 islands in the Pacific Ocean. The most remote of them are in North and East Polynesia, the Hawaiian Islands, and French Polynesia. Biologists have been attracted to these regions since the 18th century, but French Polynesia has received much less attention compared to the Hawaiian Islands.
A view of the area where Olpium caputi was found. Photo by Frédéric A. Jacq
Contributions to our knowledge of the pseudoscorpions of French Polynesia date from the 1930s and are associated with the Pacific Entomological Survey. Since then, the French Polynesian pseudoscorpion fauna has consisted of only four known species.
A female individual of Olpium caputi.
Thanks to international cooperation, a team of enthusiastic scientists has published the first discovery of a new species of pseudoscorpion from French Polynesia. Between 2017 and 2020, they studied French Polynesia’s fauna and environment for the French Polynesian Agricultural Service and as a part of a large-scale survey of arthropods. During their research work, they collected a few pseudoscorpion specimens on Huahine and Tahiti in the Society Islands.
Among them is a new species named Olpium caputi, collected by sieving moss at 1,450 m about sea level on the Mont Marau Summit, Tahiti, one of the Society Islands archipelago. Its scientific name honours Zuzana Čaputová, the President of Slovakia.
“As a female leader, she takes a strong stance and supports women and scientists. Even in the 21st century, women in science or top positions are rare. The rarity of the research in French Polynesia, the uniqueness of the discovery, and the fact that the new species is a female, led us to name it after this inspiring woman who can be a role model of courage and perseverance for many women,” says Jana Christophoryová, who led the study.
The paper is published in the open-access, peer-reviewed journal ZooKeys.
The team:
Katarína Krajčovičová of Bratislavské regionálne ochranárske združenie – BROZ, Bratislava, and Jana Christophoryová of Comenius University, Bratislava, are both zoologists, who specialize in the taxonomy, distribution, and ecology of pseudoscorpions. Frédéric Jacq, botanist, and Thibault Ramage, entomologist, are independent naturalists who have been working on improving the faunistic and taxonomic knowledge of French Polynesia for over 15 years.
Research article:
Krajčovičová K, Ramage T, Jacq FA, Christophoryová J (2024) Pseudoscorpions (Arachnida, Pseudoscorpiones) from French Polynesia with first species records and description of new species. ZooKeys 1192: 29-43. https://doi.org/10.3897/zookeys.1192.111308
The indexing is one of the major outcomes from the partnerships within the Horizon 2020-funded project Biodiversity Community Integrated Knowledge Library (BiCIKL)
In a joint effort between the Swiss-based Text Mining group of Patrick Ruch at SIB (developing SIBiLS), the text- and data-mining association Plazi and scientific publisher Pensoft, the long-time collaborators have started feeding full-text content of over 500,000 taxonomic treatments extracted by Plazi and tens of thousands full-text articles from 40 well-renowned biodiversity journals published by Pensoft to the SIBiLS database.
What this means is that users at SIBiLS – be it human or AI – have now gained access to advanced text- and data-mining tools, including AI-powered factoid question-answering capacities, to query all this full-text indexed content and seek out, for example, species traits and biotic interactions.
To index and directly feed the content from its 40+ academic outlets at SIBiLS, Pensoft relies on advanced and full-text TaxPub JATS XML journal publication workflow, powered by the ARPHA publishing platform. Meanwhile, Plazi uses its GoldenGate text- and data-mining software to harvest taxon treatments from over 80 journals stored at TreatmentBank and the Biodiversity Literature Repository, and then further re-used by GBIF, OpenBiodiv and now by SiBILS.
Seen as a pilot, the indexing – the partners believe – could soon be extended with other journals relying on modern publishing or converted legacy publications.
However, there were still gaps left to bridge before SIBiLS could indeed be dubbed “the Biodiversity PMC”, and those have mostly been about volume and breadth of content. While the above-mentioned five journals by Pensoft had long been indexed by SIBiLS through harvesting PMC, those had been quite an exception since, several years ago, a reorganisation at PMC moved the focus of the database to almost exclusively biomedical content, thus leaving biodiversity journals out of the scope of the database.
In the meantime, while Plazi has been feeding SIBiLS a growing volume of taxonomic treatments and visual data, as it was exponentially increasing the number of publishers and journals it mined data from, a lot of biodiversity data (e.g. genetic, molecular, ecological) published in the article narratives that were not taxon treatments could not make it to the portal.
“We all know the advantages and practical uses PMC offers to its users, so we cannot miss the opportunity to incorporate this well-proven approach to navigate the data deluge in biodiversity science. Undoubtedly, it is an extremely ambitious and demanding task. Yet, I believe that, at the BiCIKL consortium, we have made it pretty clear we have the necessary expertise, know-how and aspiration to take on the challenge,”
said Prof. Lyubomir Penev, founder/CEO at Pensoft and project coordinator of BiCIKL.
“For far too long, scientific knowledge about biodiversity has been imprisoned in a continuously growing corpus of scientific outputs, which – most of the time – are published in unstructured formats, such as PDF, or as paywalled content, and often locked by both! This means that they are – at best – difficult to access and comprehend by computer algorithms. In the meantime, we need all that knowledge, in order to accelerate our understanding of the dynamics of the global biodiversity crisis and to efficiently assess the impact of climate change. This is why the need for advanced workflows and tools to annotate, mine, query and discover new facts from the available literature is more than obvious,”
added Dr. Donat Agosti, President at Plazi.
“In the course of the BiCIKL project, at SIBiLS, we started indexing a larger set of biodiversity-related contents in the broad sense, including environmental sciences and ecology, to build a new literature database, or what we now call ‘Biodiversity PMC’. Now, with the help of Plazi and Pensoft, we provide a unique entry point to half a million taxonomic treatments, which were not included into the original PubMed Central. Next on the list is to expand our network of literature sources and continue this exponential growth of queryable biodiversity knowledge to turn Biodiversity PMC into the “One Health” library. We promise to keep you posted,”
said Dr. Patrick Ruch, Group Leader at SIB and Head of Research at HES-SO, HEG Geneva, Switzerland.
SIB is an internationally recognized non-profit organisation, dedicated to biological and biomedical data science. SIB’s data scientists are passionate about creating knowledge and solving complex questions in many fields, from biodiversity and evolution to medicine. They provide essential databases and software platforms as well as bioinformatics expertise and services to academic, clinical, and industry groups. With the recent creation of the Environmental Bioinformatics group, led by Robert Waterhouse, SIB is engaged in an unprecedented effort to streamline data across molecular biology, health and biodiversity. SIB also federates the Swiss bioinformatics community of some 900 scientists, encouraging collaboration and knowledge sharing.
***
About Plazi:
Plazi is an association supporting and promoting the development of persistent and openly accessible digital taxonomic literature. To this end, Plazi maintains TreatmentBank, a digital taxonomic literature repository to enable archiving of taxonomic treatments; develops and maintains TaxPub, an extension of the National Library of Medicine / National Center for Biotechnology Informatics Journal Article Tag Suite for taxonomic treatments; is co-founder of the Biodiversity Literature Repository at Zenodo, participates in the development of new models for publishing taxonomic treatments in order to maximise interoperability with other relevant cyberinfrastructure components such as name servers and biodiversity resources; and advocates and educates about the vital importance of maintaining free and open access to scientific discourse and data. Plazi is a major contributor to the Global Biodiversity Information Facility.
Leading scholarly publisher Pensoft has announced a strategic collaboration with R Discovery, the AI-powered research discovery platform by Cactus Communications, a renowned science communications and technology company. This partnership aims to revolutionize the accessibility and discoverability of research articles published by Pensoft, making them more readily available on R Discovery to its over three million researchers across the globe.
R Discovery, acclaimed for its advanced algorithms and an extensive database boasting over 120 million scholarly articles, empowers researchers with intelligent search capabilities and personalized recommendations. Through its innovative Reading Feed feature, R Discovery delivers tailored suggestions in a format reminiscent of social media, identifying articles based on individual research interests. This not only saves time but also keeps researchers updated with the latest and most relevant studies in their field.
Open Science is much more than cost-free access to research output.
Lyubomir Penev
One of R Discovery’s standout features is its ability to provide paper summaries, audio readings, and language translation, enabling users to quickly assess a paper’s relevance and enhance their research reading experience significantly.
With over 2.5 million app downloads and upwards of 80 million journal articles featured, the R Discovery database is one of the largest scholarly content repositories.
“At Pensoft, we do realise that Open Science is much more than cost-free access to research outputs. It is also about easier discoverability and reusability, or, in other words, how likely it is for the reader to come across a particular scientific publication and, as a result, cite and build on those findings in his/her own studies. By feeding the content of our journals into R Discovery, we’re further facilitating the discoverability of the research done and shared by the authors who trust us with their work,” said ARPHA’s and Pensoft’s founder and CEO Prof. Lyubomir Penev.
Abhishek Goel, Co-Founder and CEO of Cactus Communications, commented on the collaboration, “We are delighted to work with Pensoft and offer researchers easy access to the publisher’s high-quality research articles on R Discovery. This is a milestone in our quest to support academia in advancing open science that can help researchers improve the world.”
So far, R Discovery has successfully established partnership with over 20 publishers, enhancing the platform’s extensive repository of scholarly content. By joining forces with R Discovery, Pensoft solidifies its dedication to making scholarly publications from its open-access, peer-reviewed journal portfolio easily discoverable and accessible.
Dr. Paul D. N. Hebert, known as “the father of DNA barcoding,” has been honoured with the prestigious Benjamin Franklin Medal, a testament to his trailblazing contributions to biodiversity science.
Dr. Hebert’s innovative work has advanced our understanding of global biodiversity, making the identification of species easier, which in turn helps support global conservation efforts. By devising a method that allows the quick and efficient discerning of species, he has transformed biodiversity science.
DNA barcoding has many applications in the classification and monitoring of biodiversity. It can help protect endangered species, control agriculture pests, and identify disease vectors.
Dr. Hebert is also chair of the advisory board of Pensoft’s journal Metabarcoding and Metagenomics. He has authored 13 papers in ZooKeys, substantially contributing to untangling the taxonomy of braconid wasps, butterflies, and other insects.
Acylomus ergoti, one of the many insect species Dr. Hebert has worked on.
His innovative approach has sparked discussions and debates around the role of novel methodologies in taxonomy.
Dr. Hebert’s recognition with the Benjamin Franklin Medal demonstrates the critical role of biodiversity studies in dealing with global challenges such as the biodiversity crisis. He has inspired a generation of scientists to push the boundaries of knowledge and drive innovation in research technology.
We at Pensoft extend our heartfelt congratulations to Dr. Paul D. N. Hebert on this well-deserved recognition. He continues to lead the way in unravelling the complexities of global biodiversity.
A new agamid joins Asia’s rich reptile fauna, officially described as new to science in the open-access journal ZooKeys.
Calotes wangi.
“From 2009 to 2022, we conducted a series of field surveys in South China and collected a number of specimens of the Calotes versicolor species complex, and found that the population of what we thought was Calotes versicolor in South China and Northern Vietnam was a new undescribed species and two subspecies,” says Yong Huang, whose team described the new species.
Calotes wangi hainanensis, a newly discovered subspecies of Calotes wangi.
Wang’s garden lizard (Calotes wangi) is less than 9 cm long, and one of its distinguishing features is its orange tongue.
“Calotes wangi is found in subtropical evergreen broad-leaved forests and tropical monsoon forests in southern China and northern Vietnam, mostly in mountainous areas, hills and plains on forest edges, arable land, shrub lands, and even urban green belts. It is active at the edge of the forest, and when it is in danger, it rushes into bushes or climbs tree trunks to hide. Investigations found that the lizards lie on sloping shrub branches at night, sleeping close to the branches,” says Yong Huang.
Calotes wangi.
It is active from April to October every year, while in the tropics it is active from March to November or even longer, and eats a variety of insects, spiders, and other arthropods.
For now, the researchers estimate that the new species is not threatened, but they do note that in some areas its habitat is fragmented.
Images of Calotes wangi’s habitat.
“In addition, their bodies are used medicinally and the lizards are also eaten,” they write in their research paper.
This is why they suggest that the local government strengthen the protection of their ecological environment and pay close attention to the population dynamics.
Research article:
Huang Y, Li H, Wang Y, Li M, Hou M, Cai B (2023) Taxonomic review of the Calotes versicolor complex (Agamidae, Sauria, Squamata) in China, with description of a new species and subspecies. ZooKeys 1187: 63-89. https://doi.org/10.3897/zookeys.1187.110704
Despite the success of 2023, the Pensoft team is keener than ever to improve in every aspect in the coming year. A massive thank you to every author, editor, reviewer and reader of Pensoft’s journals, and a very happy New Year!
In a collaborative study involving institutions from Singapore, Malaysia, Germany, and the UK, scientists have discovered a new species of pit viper from Myanmar that is both similar and different from its adjacent sister species.
Finding and describing new species can be a tricky endeavor. Scientists typically look for distinctive characters that can differentiate one species from another. However, variation is a continuum that is not always easy to quantify. At one extreme, multiple species can look alike even though they are different species—these are known as cryptic species. At the other extreme, a single species can be highly variable, creating an illusion of being different species. But what happens when you encounter both extremes simultaneously?
A specimen of Trimeresurus ayeyarwadyensis from the Yangon Region, Myanmar. Photo by Wolfgang Wüster
“Asian pit vipers of the genus Trimeresurus are notoriously difficult to tell apart, because they run the gamut of morphological variation. Some groups contain multiple species that look alike, while others may look very different but are actually the same species,” they say.
A specimen of Trimeresurus ayeyarwadyensis from the Yangon Region, Myanmar. Photo by Wolfgang Wüster
The redtail pit viper (Trimeresuruserythrurus) occurs along the northern coast of Myanmar and is invariably green with no markings on its body. A different species called the mangrove pit viper (Trimeresuruspurpureomaculatus) occurs in southern Myanmar. This species typically has distinct dorsal blotches, and incredibly variable dorsal coloration including gray, yellow, brown, and black, but never green. Interestingly, in central Myanmar, sandwiched between the distribution of the redtail pit viper and the mangrove pit viper, a unique population exists that is green with varying degrees of blotchiness, which appears to be a blend between the redtail pit viper and the mangrove pit viper.
“This mysterious population in central Myanmar baffled us and we initially thought that it could be a hybrid population,” the researchers said. In a separate paper, Dr Chan used modern genomic techniques and determined that the population in central Myanmar was actually a distinct species and not a hybrid population.
But this was not the end of the story. The researchers discovered another surprise when they examined the snake’s morphological features: they found that the new species was also highly variable. Certain populations are dark green with distinct blotches, easily distinguishable from its closest relative, the redtail pit viper, which is bright green with no blotches. However, some populations of the new species are bright green with no blotches and look virtually identical to the redtail pit viper.
A specimen of Trimeresurus ayeyarwadyensis from Meinmahla Kyun Wildlife Sanctuary, Pyapon District, Ayeyarwady Region in Myanmar. Credit Hla tunA specimen of Trimeresurus ayeyarwadyensis from Mwe Hauk Village, Ayeyarwady Region in Myanmar. Credit Dong Lin
“This is an interesting phenomenon, where one species is simultaneously similar and different from its closest relative (the redtail pit viper). We think that at some point in the past, the new species may have exchanged genes with the redtail pit viper from the north and the mangrove pit viper from the south,” says Dr Chan.
The new species is called the Ayeyarwady pit viper (Trimeresurusayeyarwadyensis) in reference to the Ayeyarwady River, which is the largest and one of the most important rivers in Myanmar. The river forms an expansive delta that is bounded by the Pathein River to the west and the Yangon River to the east. These rivers and their associated basins also mark the westernmost and easternmost distribution boundaries of the Ayeyarwady pit viper.
Research article:
Chan KO, Anuar S, Sankar A, Law IT, Law IS, Shivaram R, Christian C, Mulcahy DG, Malhotra A (2023) A new species of pit-viper from the Ayeyarwady and Yangon regions in Myanmar (Viperidae, Trimeresurus). ZooKeys 1186: 221-234. https://doi.org/10.3897/zookeys.1186.110422
In the depths of Ecuador’s wilderness, scientists have unveiled the presence of two new tarantula species from the slopes of the Andes in the western part of the country.
In the depths of Ecuador’s wilderness, scientists have unveiled the presence of two new tarantula species. Researchers of Universidad San Francisco de Quito found them on trees on the slopes of the Andes in the western part of the country.
Meet Ecuador’s newest tarantulas
One of them was found in late February 2023, 1.5 m above the forest floor in the foothill evergreen forest of the Cordillera Occidental . Just discovered, it is already seriously threatened as people use its habitat for mining and agriculture. Its scientific name reflects this vulnerability: the tarantula is called Psalmopoeus chronoarachne, from the Greek words for “time” and “spider.”
Psalmopoeus chronoarachne.
“The compound word refers to the adage that these spiders could ‘have their time counted’ or reduced by impactful anthropogenic activities. The name addresses conservation concerns about the survival and prevalence of spider species in natural environments,” they write in their paper, which was just published in the open-access journal ZooKeys.
The other newly discovered tarantula has an even more curious name: Psalmopoeus satanas. “It is appropriately named because the initial individual that was collected had an attitude!” says researcher Roberto J. León-E, who first spotted it in a bamboo fence in San José de Alluriquín. The spider immediately exhibited defensive behavior; “this behavior then transformed into fleeing, where the spider made quick sporadic movements, nearly too fast to see.”
Psalmopoeus satanas.
It was the first tarantula he ever caught.
“The members of the Mygalomorphae Research Group in the Laboratory of Terrestrial Zoology at Universidad San Francisco de Quito grew very fond of this individual during its care, in spite of the individual’s bad temperament and sporadic attacks (reason for the nickname),” he writes in the paper.
The species, which can be found in in the north of the Cordillera Occidental of the Andes at about 900 m above sea level, is facing serious threats as its habitat is degraded, ever declining, and severely fragmented by cropland and mining concessions and expanding urban and agricultural territories.
Critically endangered: threats to tarantula survival
“It is important to consider that the areas in which these arthropods live are not under legal protection. The implementation of protected areas in these localities is essential to maintain the remaining population of these endangered species and to encourage research on the remaining undescribed or unknown tarantula species in the area,” says Pedro Peñaherrera-R, who led the research on these animals.
Mining concessions in Ecuador.Credit José Manuel Falcón-Reibán
This makes the region highly vulnerable to both legal and illegal mining operations that extract metals such as copper, silver, and gold, introducing pollutants to its ecosystems.
The implementation of stricter regulations and penalties for illegal mining or other extracting-related activities, including specimen smuggling, might help these species survive. Likewise, the engaging and educating of local communities about the importance of biodiversity conservation is essential to avoid further extinction.
“We encourage future work by Ecuadorian and international researchers, organisations, and governments to effectively understand the reality about the threat of tarantula smuggling and the required conservation status of each species in the country.” Says Roberto J. León-E.
Overview of the ecosystem of both species. Credit Naia Andrade Hoeneisen
“It is essential to consider the potential loss of both P. chronoarachne and P. satanas and the ecological consequences that would result from their extinctions. These species may serve essential roles in the stratified micro-ecosystems in their respective areas,” the researchers write in their paper.
The dark side: illegal trade in wild tarantulas
Illegal trade in wild tarantulas as pets is also a latent threat, not only to these two species, but to Ecuadorian tarantulas in general. Many tarantula species can be found for sale online on various websites and Facebook groups. “During the writing of this article and the publication of another article, we found that a species that we described (Neischnocolus cisnerosi) is currently in the illegal pet trade!” says Pedro Peñaherrera-R.
After studying papers on wild-caught pet-trade specimens, the researchers conclude that the issue has been going on for more than 30 years in the country. “Although this series of publications encouraged research on Ecuadorian tarantulas previously ignored for centuries, they also functioned as catalysts within the exotic pet-trade hobby, aiding in obtaining these species and further encouraging people to collect undescribed species,” says Pedro Peñaherrera-R with concern.
Original source:
Peñaherrera-R. P, León-E. RJ (2023) On Psalmopoeus Pocock, 1895 (Araneae, Theraphosidae) species and tarantula conservation in Ecuador. ZooKeys 1186: 185-205. https://doi.org/10.3897/zookeys.1186.108991
October and November 2023 were active months for the Pensoft team, who represented the publisher’s journals and projects at conferences in Europe, North America, South America, Oceania and Asia.
Let’s take a look back at all the events of the past two months.
The Biodiversity Information Standards Conference 2023
The annual gathering is a crucial platform for sharing insights, innovations, and knowledge related to biodiversity data standards and practices. Key figures from Pensoft took part in the event, presenting new ways to improve the management, accessibility, and usability of biodiversity data.
Prof. Lyubomir Penev, founder and Chief Executive Officer of Pensoft, gave two talks that highlighted the importance of data publishing. His presentation on “The Biodiversity Knowledge Hub (BKH): A Crosspoint and Knowledge Broker for FAIR and Linked Biodiversity Data” underscored the significance of FAIR (Findable, Accessible, Interoperable, and Reusable) data standards. BKH is the major output from the Horizon 2020 project BiCIKL (Biodiversity Community Integrated Knowledge Library) dedicated to linked and FAIR data in biodiversity, and coordinated by Pensoft.
Prof. Lyubomir Penev, Pensoft founder and CEO.
He also introduced the Nanopublications for Biodiversity workflow and format: a promising new tool developed by Knowledge Pixels and Pensoft to communicate key scientific statements in a way that is human-readable, machine-actionable, and in line with FAIR principles. Earlier this year, Biodiversity Data Journal integrated nanopublications into its workflow to allow authors to share their findings even more efficiently.
Chief Technology Officer of Pensoft Teodor Georgiev contributed to the conference by presenting “OpenBiodiv for Users: Applications and Approaches to Explore a Biodiversity Knowledge Graph.” His session highlighted the innovative approaches being taken to explore and leverage a biodiversity knowledge graph, showcasing the importance of technology in advancing biodiversity research.
Metabarcoding and Metagenomics editor-in-chief, Florian Leese.
The theme of the conference was “Monitoring Biodiversity for Action” and there was particular emphasis on the development of best practices and new technologies for biodiversity observations and monitoring to support transformative policy and conservation action.
Metabarcoding & Metagenomics’ editor-in-chief, Florian Leese, was one of the organisers of the “Standardized eDNA-Based Biodiversity Monitoring to Inform Environmental Stewardship Programs” session. Furthermore, the journal was represented at Pensoft’s exhibition booth, where conference participants were able to discuss metabarcoding and metagenomics research.
#geobonconf2023 was great as it linked different actors performing #biodiversity monitoring. Today we discussed #eDNA standardisation. We need formal standards, QA/QC, guidance, 🌐harmonisation to facilitate uptake. Cool to see our @DNAquaNet practical guide in this context. pic.twitter.com/eTOtr3yug8
Following the conference, Metabarcoding & Metagenomics announced a new special issue titled “Towards Standardized Molecular Biodiversity Monitoring.” The special issue is accepting submissions until 15th March 2024.
Asian Mycological Congress2023
The Asian Mycological Congress welcomed researchers from around the world to Busan, Republic of Korea, for an exploration of all things fungi from 10-13 October.
MycoKeys Best Talk award (winner not pictured).
Titled “Fungal World and Its Bioexploitation – in all areas of basic and applied mycology,” the conference covered a range of topics related to all theoretical and practical aspects of mycology. There was a particular emphasis on the development of mycology through various activities associated with mycological education, training, research, and service in countries and regions within Asia.
As one of the sponsors of the congress, Pensoft proudly presented a Best Talk award to Dr Sinang Hongsanan of Chiang Mai University, Thailand. The award entitles the winner to a free publication in Pensoft’s flagship mycology journal, MycoKeys.
Joint ESENIAS and DIAS Scientific Conference 2023
The ESENIAS and DIAS conference took place from 11-14 October and focused on “globalisation and invasive alien species in the Black Sea and Mediterranean regions.” Pensoft shared information on their NeoBiota journal and the important REST-COAST and B-Cubed projects.
Polina Nikova receiving the NeoBiota Best Talk Award.
Polina Nikova of the Bulgarian Academy of Sciences received the NeoBiota Best Talk Award for her presentation titled “First documented records in the wild of American mink (Neogale vision von Schreber, 1776) in Bulgaria.” The award entitles her to a free publication in the NeoBiota journal.
XII European Congress of Entomology
Pensoft took part in the XII European Congress of Entomology (ECE 2023) in Heraklion, Crete, from 16-20 October. The event provided a forum for entomologists from all over the world, bringing together over 900 scientists from 60 countries.
Carla Stoyanova, Teodor Metodiev and Boriana Ovcharova representing Pensoft.
The ECE 2023, organised by the Hellenic Entomological Society, addressed the pressing challenges facing entomology, including climate change, vector-borne diseases, biodiversity loss, and the need to sustainably feed a growing world population. The program featured symposia, lectures, poster sessions, and other types of activities aimed at fostering innovation in entomology. For Pensoft, they were a great opportunity to interact with scientists and share their commitment to advancing entomological research and addressing the critical challenges in the field.
🐝Today at #ECE2023, Prof Denis Michez & Sara Reverté are running a workshop on bee identification!
Throughout the event, conference participants could find Pensoft’s team at thir booth, and learn more about the scholarly publisher’s open-access journals in entomology. In addition, the Pensoft team presented the latest outcomes from the Horizon 2020 projects B-GOOD, Safeguard, and PoshBee, where the publisher takes care of science communication and dissemination as a partner.
Group photo of XIV International Congress of Orthopterology 2023 participants.
Hosted for the first time in Mexico, it attracted experts and enthusiasts from around the world. The congress featured plenary speakers who presented cutting-edge research and insights on various aspects of grasshoppers, crickets, and related insects.
Pensoft’s Journal of Orthoptera Research was represented by Tony Robillard, the editor-in-chief, who presented the latest developments of the journal to attendees.
Symposia, workshops, and meetings facilitated discussions on topics like climate change impacts, conservation, and management of Orthoptera. The event also included introductions to new digital and geospatial tools for Orthoptera research.
The 16th International Conference on Ecology and Management of Alien Plant Invasions
4th International ESP Latin America and Caribbean Conference
The 4th International ESP Latin America and Caribbean Conference (ESP LAC 2023) was held in La Serena, Chile, from 6-10 November. Focused on “Sharing knowledge about ecosystem services and natural capital to build a sustainable future,” the event attracted experts in ecosystem services, particularly from Latin America and the Caribbean.
🤩 So excited to be part of the 4th International ESP Latin America and Caribbean Conference, which opens later today! In a great tradition with the ESP conferences, we are offering three full APC waivers for the three best posters.@ESPartnershiphttps://t.co/O97nwEGnMj
Organised by the Ecosystem Services Partnership, this bi-annual conference was open to both ESP members and non-members, featuring a hybrid format in English and Spanish. Attendees enjoyed an excursion to La Serena’s historical center, adding a cultural dimension to the event.
The conference included diverse sessions and a special recognition by Pensoft’s One Ecosystem journal, which awarded full waivers for publication to the authors of the three best posters.
Magaly Aldave receiving the Best Poster Award.
Magaly Aldave of the Transdisciplinary Center for FES-Systemic Studies claimed first prize with “The voice of children in the conservation of the urban wetland and Ramsar Site Pantanos de Villa in Metropolitan Lima, Peru.” Ana Catalina Copier Guerrero and Gabriela Mallea-Rebolledo, both of the University of Chile, were awarded second and third prize respectively.
The event featured in-person and online participation, catering to a wide audience of researchers, academics, and students. It included workshops, presentations, and discussions, with a focus on enhancing understanding in biosystematics.
Pensoft awarded three student prizes at the event. Putter Tiatragu, Australian National University, received the Best Student Talk award and a free publication in any Pensoft journal for “A big burst of blindsnakes: Phylogenomics and historical biogeography of Australia’s most species-rich snake genus.”
Helen Armstrong, Murdoch University, received the Best Student Lightning Talk for “An enigmatic snapper parasite (Trematoda: Cryptogonimidae) found in an unexpected host.” Patricia Chan, University of Wisconsin-Madison, was the Best Student Lightning Talk runner-up for “Drivers of Diversity of Darwinia’s Common Scents and Inflorescences with Style: Phylogenomics, Pollination Biology, and Floral Chemical Ecology of Western Australian Darwinia (Myrtaceae).”
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As we approach the end of 2023, Pensoft looks back on its most prolific and meaningful year of conferences and events. Thank you to everyone who contributed to or engaged with Pensoft’s open-access journals, and here’s to another year of attending events, rewarding important research, and connecting with the scientific community.
