Tag: natural history

Moth collected by Alfred Russel Wallace is key to describing 11 new species

“We have not only revived Francis Walker’s species Topiris candidella, from 1863, but also expanded our understanding of an entire group of small white moths.”

  • A moth neglected by experts for a century is found to have been collected by Alfred Russel Wallace 169 years ago
  • Cutting-edge techniques allowed scientists to show the moth as belonging to a genus comprising 14 species, 11 of which are new to science
  • One of the new species has been named after Greta Thunberg
A black-and-white studio photograph of a man with a long beard sitting in a chair, dressed in formal attire, against a simple backdrop.
Alfred Russel Wallace

Scientists at the Natural History Museum (NHM), London, have discovered that a long-overlooked moth specimen in the Museum’s collection was in fact collected by explorer and naturalist, Alfred Russel Wallace, in 1855. This was at the same time as he was formulating his own revolutionary ideas on the origins of species which he would go on to share with Charles Darwin.

The small white moth, Topiris candidella, was described in 1863 by Francis Walker but was dismissed in 1927 by leading entomologist Edward Meyrick as “better neglected” having suffered substantial damage due to historic storing practices. The moth has remained overlooked for nearly a century, until now.

A photograph of a white moth displayed on a pin against a light background.
Topiris candidella, the modern specimen used for the reference. Photo credit: © Mark Sterling/Trustees of NHMUK

Using a cutting-edge DNA sequencing method, NHM scientists extracted genetic material from a single fragment of one of the specimen’s remaining legs and connected it to a group of moths found throughout South East Asia.

The scientists were able to prove that rather than being a single neglected species, Topiris is in fact a genus of 14 species, including 11 species which are new to science and described today in the paper published in ZooKeys.

One of these species is named Topiris thunbergella, in honour of Greta Thunberg and her work in raising awareness of the environmental pressures on the native forests of South East Asia.

Dr David Lees, Senior Curator for Microlepidoptera at the Natural History Museum, adds, “This discovery highlights the incredible potential of modern DNA analysis to reveal the evolutionary history of species, even from fragmented and long-forgotten specimens.

“By applying this innovative sequencing technique, we have not only revived Francis Walker’s species Topiris candidella, from 1863, but also expanded our understanding of an entire group of small white moths.”

During their research, David and fellow moth expert, Mark Sterling, found that a hidden label under the pin of the broken moth bore the handwritten letters “SAR”, a clue that this moth had been collected by Alfred Russel Wallace as part of over a thousand moths he collected at Rajah Brooke’s Forest retreat.

  • Close-up photo of a white moth displaying detailed wing textures and prominent antennae against a gray background.
    Topiris albidella
  • A photograph of a moth with textured wings and light brown speckles, displayed against a gray background.
    Paralecta rosiflora
  • Close-up photo of a pale yellow moth with fringed wings, displayed against a gray background, perched on a white support.
    Topiris thunbergella
  • Close-up photo of a pale, fluffy moth with wide wings and slender antennae, displayed upright against a gray background.
    Topiris salva

This was in December 1855, just months before he published his ‘Sarawak Law’ paper, which eventually led to a joint reading (at Darwin’s request) of their theories of evolution through natural selection.

Beyond the scientific breakthrough, the study has wider conservation implications. Of the 24 species reviewed in their paper, only three have been recorded since 2000, highlighting the urgent need for biodiversity monitoring in this region.

Mark Sterling added, “The 80 million specimens currently held in the Natural History Museum’s collections continue to be a critical resource for understanding biodiversity and assessing the effects of environmental change.”

Research article:

Sterling MJ, Price BW, Lees DC (2025) A revision of the hitherto neglected genus Topiris Walker, 1863 (Lepidoptera, Xyloryctidae) with taxonomic notes on the genus Athrypsiastis Meyrick, 1910. ZooKeys 1229: 297-368. https://doi.org/10.3897/zookeys.1229.119155

This press release was originally published by the National History Museum, London. It is republished here with permission.

A new name for one of the world’s rarest rhinoceroses

Recognizing the Sundaic rhinoceros as a separate genus not only improves scientific understanding but also has important implications for conservation efforts.

A new study revealed significant differences in the appearance and behaviour of the two one-horned Asiatic rhinoceros species, challenging long-standing classifications and supporting a re-evaluation of their status.

A photo of a one-horned rhinoceros standing amidst lush green foliage.
Sundaic rhinoceros (Eurhinoceros sondaicus). Photo by Toby Nowlan

The study, led by zoologist Francesco Nardelli and paleontologist Kurt Heißig, highlights how millions of years of evolutionary pressures have shaped the distinct adaptations of the Indian (Rhinoceros unicornis) and Sundaic (Rhinoceros sondaicus)rhinoceroses. The critically endangered Sundaic rhinoceros has a slender skull, a broader and lower back of the head, and a shorter nose and teeth suited for browsing leaves. In contrast, the Indian rhinoceros has a more robust skull and taller teeth adapted for grazing on grasses.

“Adaptations of large terrestrial mammals to various environments are linked to the diversity of food items they can consume, which is reflected in the variation of their dental and cranial morphologies,” the researchers write in their paper, published in the journal ZooKeys. “In rhinoceroses, these adaptations are identified in their teeth structure and head posture.”

The Sundaic rhinoceros, now confined to Java’s Ujung Kulon peninsula, is a browsing species with uniquely polygonal-patterned skin and, unlike any other living rhinoceros, hornless females. In contrast, the Indian rhinoceros is a grazer of riverine grasslands in northern India and Nepal. With deep skin folds and a heavier build, the Indian rhinoceros is considerably larger than its Sundaic relative. It is superseded in size only by the elephant and the white rhinoceros, with males weighing more than 2,000 kg and females reaching 1,600 kg.

Indian rhinoceros (Rhinoceros unicornis). Photo by Olivier Bacquet

Fossil evidence confirms that these differences evolved independently over a long period of time. The authors maintain that they represent fundamental anatomical and ecological distinctions and reflect deep evolutionary adaptations.

The behaviour of the two species also differs significantly, with the Sundaic rhinoceros being solitary wanderers and Indian rhinoceros forming temporary crashes.

“Both species possess unique adaptations for survival, emphasising the importance of understanding their systematics for effective conservation,” the researchers write in their paper.

Based on these findings, the scientists propose a more precise scientific name for the Sundaic rhino: Eurhinoceros sondaicus. “Recognizing Eurhinoceros sondaicus as a distinct genus provides a more accurate reflection of its evolutionary history and ecological specialization,” they assert. “This refined classification not only enhances our understanding of rhinoceros evolution but also provides a clearer framework for conservation planning, helping to tailor strategies for the protection of these critically endangered animals.”

Original Source:

Nardelli F, Heißig K (2025) A taxonomic review of the genus Rhinoceros with emphasis on the distinction of Eurhinoceros (Perissodactyla, Rhinocerotidae). ZooKeys 1230: 303-333. https://doi.org/10.3897/zookeys.1230.127858

Rare frog rediscovered after 130 years

First described in 1902, Alsodes vittatus had evaded detection since then, despite multiple search efforts.

The frog Alsodes vittatus is an elusive creature – described in 1902, it managed to go undetected for more than a century. Now, after a decade of investigation, a research team has rediscovered it, in its first sighting after 130 years.

A female individual of Alsodes vittatus.

Researchers from the Laboratory of Systematics and Conservation of Herpetozoa (SyCoH) of the University of Concepción, Chile – Dr. Claudio Correa, engineer in renewable natural resources Edvin Riveros Riffo, and biologist Juan Pablo Donoso, have published their extraordinary discovery in the journal ZooKeys.

Alsodes vittatus was scientifically described in 1902 by Rodulfo Amando Philippi, a German naturalist living in Chile. French entomologist Philibert Germain had discovered the species in 1893 at the former Hacienda San Ignacio de Pemehue in La Araucanía Region, Chile, and brought three specimens to Philippi for description. Since then, no one has seen the species again, despite multiple search efforts.

A male individual of Alsodes vittatus.

Between 1995 and 2002, several researchers unsuccessfully tried to find it in the Pemehue area, at the northwestern end of the former estate. In 2015 and 2016, new expeditions led by Claudio Correa and Juan Pablo Donoso managed to locate two populations of Alsodes in the same area, but the individuals they saw lacked A. vittatus’ distinctive white or yellow stripe on the back, suggesting they likely belonged to a different species.

A male individual of Alsodes vittatus.

“The main challenge in locating it was the lack of precision in the description of its type locality,” say the researchers. “In Germain’s time, the Hacienda San Ignacio de Pemehue was an estate of enormous size, and the naturalist did not specify the exact place where he collected the specimens.”

To locate the species, Correa and his team had to reconstruct the route that Germain could have followed within the estate by studying his publications and other historical documents. In 2023 and 2024, Claudio Correa and Edvin Riveros followed the reconstructed route, entering the former estate from the southeastern end. There, they found two populations of A. vittatus in the Lolco and Portales river basins in La Araucanía region, confirming the existence of this enigmatic species after more than a century without records.

The habitat of Alsodes vittatus.

This is an important milestone for South American herpetology and the conservation of biodiversity in the southern cone. Most of the other species in the genus Alsodes are either threatened with extinction or we don’t know enough about them to assess their status, and shedding light on where and how they live is the first step in protecting them.

“The rediscovery of A. vittatus allowed us to obtain, more than a century after its description, the first biological and ecological data on the species. Field observations also indicate that this amphibian faces several significant threats and that it could be considered endangered,” the researchers warn. “In a broader context, this rediscovery demonstrates the limited biological, evolutionary and biogeographic knowledge of the amphibians that inhabit the southern cone of South America, emphasizing the urgency of their study and conservation.”

Research article:

Correa C, Riveros-Riffo E, Donoso JP (2025) Lost for more than a century: the rediscovery of Alsodes vittatus (Philippi, 1902) (Anura, Alsodidae), one of the rarest and most elusive amphibians from Chile. ZooKeys 1230: 195-212. https://doi.org/10.3897/zookeys.1230.135523

Photos by Edvin Riveros

Community scientists at the Field Museum have digitized more than a quarter-million items and records

Volunteers and members of the “Collections Club” of the Field Museum provide a blueprint for how community scientists can help researchers around the world.

Matt von Konrat teaching student volunteers how to digitize museum specimens.
Photo by Michelle Kuo (c).

There are over three billion specimens and cultural objects housed in natural history collections around the world—things like fossils, dried plants, and pinned insects. Close to forty million of them are at the Field Museum in Chicago, mostly behind the scenes in a vast library documenting life on Earth.

These collections are used by scientists at the museum and around the world to explore what lived where and when and how living things have changed over time.

However, much of the information about these collections is hard to access, because there are no digital records of it.

Specimens from the “behind-the-scenes collections“ at the Field Museum.
Photo by John Weinstein.

Community scientists volunteering at the Field Museum who have formed a Collections Club are helping to solve this problem.

So far, they’ve digitized more than a quarter-million collections items and records.

The Field Museum recently published a scientific paper in the journal Natural History Collections and Museumomics about the work of these community scientists as a record of what they’ve accomplished and as a blueprint for other natural history collections to work with volunteers in their communities.

By the way, the Field Museum prefers to use the term “community scientists” rather than the synonymous “citizen scientists”, in order to emphasize that the work is a community effort. They also wish to be inclusive of all volunteers regardless of their citizenship status. Several community scientists are in fact listed as co-authors of the new.

“What’s remarkable is how the enthusiasm has sustained and grown,” says Matt von Konrat, Head of Botanical Collections at the Field Museum and the lead author of the paper.

“Our surveys show that participants are increasingly motivated by altruistic reasons—they want to contribute to science and support the museum’s mission.

The fact that many of our volunteers are now co-authors on this scientific paper shows how far we’ve come in breaking down traditional barriers between professional scientists and community researchers.”

Since 2015, over 3,800 volunteers have contributed more than 13,500 hours helping to digitize, catalog, and preserve specimens—equivalent to nearly eight years of full-time work. Their efforts have processed over 300,000 scientific specimens, records and objects, making valuable data accessible to researchers worldwide.

“At its core, the Field Museum strives to connect people to the natural world and the human story. The Collections Club reflects this mission by transforming over 300,000 specimens into a digital and physical legacy, providing scientists across the globe with the data they need to understand and protect our biodiversity,”

says von Konrat.

The program’s success has been driven by both in-person and virtual engagement opportunities, particularly through initiatives like WeDigBio (Worldwide Engagement for Digitizing Biocollections) and the Field Museum’s Collections Club. During the height of the COVID-19 pandemic, the program successfully pivoted to virtual participation, maintaining strong community connections when they were needed most.

Community scientists at the Field Museum’s 2019 WeDigBio event curating lichen specimens – a critical process unlocking scientific information from natural history collections.
Photo by Robert Salm.

“There were so many dynamics working against us during COVID: sporadic closures and re-openings in Chicago of restaurants, parks, museums, and businesses. The ability for me to continue cataloging and repackaging specimens for the Field Museum was the only constant and sane reference for me; days of the week and working hours had no boundaries. I don’t think any other museum in Chicago had volunteers as dedicated as the Field Museum, and I was happy to be part of the experience.”

says Robert Salm, a volunteer in the Field Museum’s botanical collections.
A Mobile Museum display made by Field Museum Collections Club members Winne and Gwen Blake.
Photo by Erryn Blake.

The impact extends beyond adults to inspire the next generation of scientists. In one touching example highlighted in the paper, two fifth-grade students were so inspired by their participation that they created their own “Mobile Museum” to share natural history with other young people. These young scientists are among the paper’s co-authors, demonstrating the program’s commitment to elevating youth voices in science.

According to the Blake family, whose children Winnie and Gwen created the Mobile Museum, “Collections Club makes science tangible, accessible, and real. It shows students that away from a conventional classroom setting, where science can feel like a chore, this program helps in contributing to a global community benefiting countless research efforts. The Mobile Museum was created as an extension of Collections Club to bring the passion for science to kids of all ages.”

Collections Club members Winne (blue shirt) and Gwen (pink shirt). 
Photo by Erryn Blake.

The Field Museum’s model demonstrates how institutions of any size can engage their communities in meaningful scientific work. The paper provides detailed recommendations and checklists for other organizations looking to develop similar programs.

“This success story wouldn’t have been possible without Chicago’s vibrant media landscape helping us reach new audiences,” said von Konrat.

“From local blogs to major television networks, each platform played a vital role in building this community of scientists.

We hope this model inspires other museums and research institutions to build similar programs.

Together, we are fostering a shared legacy that underscores the value of biodiversity and scientific heritage for future generations.”

The full research paper, published in the journal Natural History Collections and Museomics, provides a comprehensive overview of the program’s development and impact over nearly a decade of community engagement, while setting a new standard for inclusive scientific authorship.

For more information about getting involved in community science at the Field Museum, visit https://www.fieldmuseum.org/activity/collections-club—the next event is coming up in January 2025!

Stay up-to-date with publications and news from the Natural History Collections and Museomics (NHCM) journal on social media on BlueSky, X and Facebook.

Research article:

von Konrat M, Rodriguez Y, Bailey C, Gwilliam III GF, Christian C, Aguero B, Ahn J, Albion Z, Allen JR, Bailey C, Blake E, Blake W, Blake G, Briscoe L, Budke JM, Campbell T, Chansler M, Clark D, Delapena R, Denslow M, Dodinval D, Dux E, Ellis S, Ellwood E, Enkhbayer M, Ens B, Evans NM, Fabian A, Ferguson A, Gaswick W, Golembiewski K, Grant S, Hancock L, Hansen K, Janney B, Jones J, Kachian Z, Kawasaki ML, Kellum K, Leek O, Lichamer A, Maier C, Mast A, Martinec JL, Mayer P, Mladek M, Nadhifah A, Neefus C, Nodulman M, Oliver M, Overberg K, Townsend Peterson A, Qazi-Lampert A, Rothfels C, Ryan ZA, Salm R, Schreiner D, Schreiner M, Tepe EJ, Turcatel M, Vega A, Wade H, Webbink K, Weinand D, Widhelm T, Zwingelberg M (2024) From spectators to stewards: Transforming public involvement in natural history collections. Natural History Collections and Museomics 1: 1-33. https://doi.org/10.3897/nhcm.1.138247

News announcement originally published by the Field Museum. Republished with permission.

Out of the dark: historical cave snail collection rediscovered in the attic

Stored in the attic for decades, the shell collection of Dominik Bilimek at BOKU University hides a plethora of untold narratives.

Guest blog post by Petra Lukeneder and Adrienne Jochum

During the past years, interest in the processing and preservation of historical, scientific collections has increased significantly. Fascinating and obscure treasures are stored along with their individual stories while splendid and exciting specimens eke out an existence in boxes and cellars. The scientific curation of the Dominik Bilimek (1813-1884) Collection at BOKU University (Vienna, Austria) is one such example. Stored in the attic for many decades, later stashed in the basement, surviving two floods, a plethora of untold narratives unfolded as the specimens were unpacked. For example, the story of the young, aspiring, Slovenian collector and researcher, Heinrich Hauffen (1836-1866), with his special interests in speleology and the fauna inhabiting the subterranean realm come to light.

A grainy black-and-white photograph of a bearded man.
The only known photograph of collector and naturalist Heinrich Hauffen (1836-1866) (Digital Library of Slovenia; reference number 5S74D58Z).

At first, it was just a label type in the collection that differed from the others. It was a multidisciplinary process to assign it to Hauffen. At that time, only few scientists were concerned with the genus Carychium, including Georg von Frauenfeld (1807-1873), Heinrich Freyer (1802-1866), and Meinrad Thaurer von Gallenstein (1811-1872), all of whom were names that were closely linked to Bilimek and his collection. Fortunately, Hauffen’s handwriting could be identified by using original manuscripts from the Archive of the National Museum of Slovenia.

In our work published in Subterranean Biology, we present our results on the rediscovery of historical material of Heinrich Hauffen, which turned out to be original material, that he used to describe the cave snail taxa Carychium reticulatum and Carychium reticulatum bidentatum. Today, the eastern Alpine and  the Dinaric subterranean members of the genus Carychium are assigned to their own genus, Zospeum, based on their troglobiontic characteristics such as lack of eyes, colourless bodies, genetic data, and their totally different shell morphology.

A photograph of a tiny white snail attached to a rocky surface, with a yellow arrow to indicate the location of the snail
Live animal, indicated by the yellow arrow, of the genus Zospeum from Krska jama cave in Slovenia. The snail’s shell appears almost to be translucent.

This interdisciplinary work not only includes historical aspects, but also a collaboration with the Natural History Museum Vienna and the Department of Evolutionary Biology (University of Vienna) in conjunction with the taxonomic expertise from the Natural History Museum Bern (Bern, Switzerland), the Senckenberg Research Institute and Natural History Museum (Frankfurt am Main, Germany) and from the Zoologische Staatssammlung München (Münich, Germany). By using light microscopy, X-ray Micro-CT data and SEM in sync with Hauffen’s original figures and handwritten documents, the morphological analysis of C. reticulatum illustrates the degree of phenotypic variation on the shells of individuals from two different cave populations of the species Zospeum spelaeum. The species Carychium bidentatum is considered a junior synonym of Zospeum costatum.

Photographs of people taking samples from caves.
Cave snail collection during field work in Slovenia and Spain.

The genus Zospeum constitutes a radiation of minute, glassy troglobitic snails (Ellobioidea) endemic to the Eastern Alps and the Dinaric Alps, extending as far west as Lake Garda in Italy and as far south as Montenegro. So far, 38 species of Zospeum have been described. Morphologically, the most informative diagnostic characters are apertural form and the degree of coiling and the shape of the columella (inner spindle) as well as the presence and configuration of the lamella in relation to it. In the Pre-Micro-CT era, one had to poke windows into the shells to view these signatory structures. Valuable material could become damaged, and many taxonomists shied from risky mishaps to assess the tiny shells (< 1.5 mm). This present work demonstrates the efficacy of fine-resolution imagery to assess valuable historic material.

A photograph of a woman walking past drawers of specimens
Archive of the Institute of Applied Geology (BOKU University), where the Bilimek Collection including Hauffen’s material, is being stored and processed. Photo by Radek Polách, Muzea Novojičínska.

Hauffen died at the age of 30 as part of the Austrian volunteer corps in Mexico – with the prospect of a permanent position at the Mexican National Museum. According to current knowledge, this is the reason why the Hauffen collection was passed on to Bilimek, who returned to Europe in 1867. There are still abundant specimens, often from localities that cannot longer be sampled nowadays, from Hauffen within the Bilimek collection. In the future, this part can hopefully be separated and scientifically processed as well.

Research article:

Lukeneder P, Ottner F, Harzhauser M, Winkler V, Metscher B, Ruthensteiner B, Jochum A (2024) Lost & Found – Rediscovery of H. Hauffen’s Carychium material in the Dominik Bilimek Collection, BOKU University, including a contemporary assessment within the genus Zospeum (Gastropoda, Ellobioidea, Carychiinae). Subterranean Biology 49: 97-116. https://doi.org/10.3897/subtbiol.49.130692

New Diamond OA journal Natural History Collections and Museomics launches on ARPHA Platform

Natural History Collections and Museomics (NHCM), a brand-new Diamond Open Access journal, has launched on ARPHA platform. 

The journal aims to serve as a leading platform for scholarly research, discussion, and innovation in the field of natural history collections worldwide and will be published by Pensoft Publishers. 

By promoting the exchange of knowledge between museum professionals, researchers, educators, and enthusiasts, the publication aims to foster a deeper understanding and appreciation of natural history and its significance in society. 

A Pensoft conference stand with a poster promoting the Natural History Collections and Museomics journal.
Natural History Collections and Museomics promoted by Pensoft at the 2024 International Congress of Entomology in Kyoto, Japan.

Natural History Collections and Museomics (NHCM) encourages interdisciplinary approaches and collaborations across fields such as taxonomy, conservation, education, ethics, and museum studies. The editorial team welcomes original research articles, reviews, case studies, methods, letters and perspectives addressing a wide range of topics related to natural history institutions and collections. 

The journal is supported by CETAF (Consortium of European Taxonomic Facilities), Europe’s leading voice for taxonomy and systematic biology. The support of this European network of scientific institutions ensures a robust and collaborative foundation for the journal’s academic endeavours.

By utilising a Diamond Open Access model, the journal allows free access to published content without any fees for authors or readers. This approach ensures that important research can reach the widest possible audience, promoting inclusivity and global collaboration in the field.

A strong Editorial Board is already in place, co-chaired by two distinguished scholars in the field. 

Dr Franco Andreone: Serving as the zoology curator at the Museo Regionale di Scienze Naturali in Turin, Italy, Dr Andreone is a renowned herpetologist with a profound impact on amphibian taxonomy, roles of natural history museums and conservation, particularly in Italy and Madagascar. His experience as a former Chair of the IUCN SSC Amphibian Specialist Group – Madagascar and his current role as a special advisor underscore his life-long dedication to preserving biodiversity.

Prof Shuqiang Li: A prominent Chinese arachnologist,  Prof Li brings his vast expertise in zoological systematics to the journal. Among many accomplishments, he led the construction of 29 natural history museums for the Chinese Academy of Sciences, one of which is an 8,800 square metre collection building to preserve more than 10 million specimens and another a 6,600 square metre public museum in the Zoological Institute in Beijing. As leading taxonomist and the Editor-in-Chief of Zoological Systematics, Professor Li has described more than 2,000 new species. His work on how Tethyan changes shaped diversification is most notable. His research has also revealed the origin of spider webs based multi-omics analyses.

The Board expects the team of subject (associate) editors to soon expand further, as they have been actively recruiting colleagues from diverse professional and geographical backgrounds. Experts in fields within the scope of the new journal are also invited to apply to join the NHCM team as either editors or reviewers. Conveniently, the respective application forms are made accessible from the journal website’s homepage.

“The journal Natural History Collections and Museomics will serve as a perfect forum and place to publish cutting-edge research.

“Natural history collections are gargantuan resources and tools to discover and preserve global diversity. We need to treat them as immense treasures to discover and describe new species and understand Earth’s marvels.”

Dr Franco Andreone and Prof Shuqiang Li, Editors-in-Chief.

“We are thrilled to launch Natural History Collections and Museomics on the ARPHA Platform. The importance of natural history collections cannot be overstated and we look forward to publishing valuable research to a wide audience.”

Prof Dr Lyubomir Penev, CEO and founder of Pensoft Publishers.

Submissions to the journal are now open. Researchers, scholars, and practitioners are invited to contribute articles to Natural History Collections and Museomics. 

For more information and submission guidelines, please visit the Natural History Collections and Museomics website.

You can also follow the journal on X and Facebook.

About ARPHA Platform:

ARPHA is a full-featured, end-to-end publishing platform for journals, books, conference materials and preprints. ARPHA offers flexible operating and business models, and a wide-range of automated and human-provided services. The ARPHA team places a special focus on its scholarly communication solutions designed to leverage the visibility and outreach of academic output, while promoting inclusivity and engagement.

About Pensoft:

Pensoft is an independent, open-access publisher and technology provider, best known for its biodiversity journals, including ZooKeys, Biodiversity Data Journal, Phytokeys, Mycokeys, One Ecosystem, Metabarcoding and Metagenomics and many others. Over the past 30 years, Pensoft has built a reputation for its innovations in the field, after launching ZooKeys: the very first digital-first scientific journal in zoology and the first to introduce semantic enrichments and hyperlinks within a biodiversity article. To date, the company has continuously been working on various tools and workflows designed to facilitate biodiversity data findability, accessibility, discoverability and interoperability.

How to ensure biodiversity data are FAIR, linked, open and future-proof?

Now concluded Horizon 2020-funded project BiCIKL shares lessons learned with policy-makers and research funders

Within the Biodiversity Community Integrated Knowledge Library (BiCIKL) project, 14 European institutions from ten countries, spent the last three years elaborating on services and high-tech digital tools, in order to improve the findability, accessibility, interoperability and reusability (FAIR-ness) of various types of data about the world’s biodiversity. These types of data include peer-reviewed scientific literature, occurrence records, natural history collections, DNA data and more.

By ensuring all those data are readily available and efficiently interlinked to each other, the project consortium’s intention is to provide better tools to the scientific community, so that it can more rapidly and effectively study, assess, monitor and preserve Earth’s biological diversity in line with the objectives of the likes of the EU Biodiversity Strategy for 2030 and the European Green Deal. Their targets require openly available, precise and harmonised data to underpin the design of effective measures for restoration and conservation, reminds the BiCIKL consortium.

Since 2021, the project partners at BiCIKL have been working together to elaborate existing workflows and links, as well as create brand new ones, so that their data resources, platforms and tools can seamlessly communicate with each other, thereby taking the burden off the shoulders of scientists and letting them focus on their actual mission: paving the way to healthy and sustainable ecosystems across Europe and beyond.

Now that the three-year project is officially over, the wider scientific community is yet to reap the fruits of the consortium’s efforts. In fact, the end of the BiCIKL project marks the actual beginning of a European- and global-wide revolution in the way biodiversity scientists access, use and produce data. It is time for the research community, as well as all actors involved in the study of biodiversity and the implementation of regulations necessary to protect and preserve it, to embrace the lessons learned, adopt the good practices identified and build on the knowledge in existence.

This is why amongst the BiCIKL’s major final research outputs, there are two Policy Briefs meant to summarise and highlight important recommendations addressed to key policy makers, research institutions and funders of research. After all, it is the regulatory bodies that are best equipped to share and implement best practices and guidelines.

Most recently, the BiCIKL consortium published two particularly important policy briefs, both addressed to the likes of the European Commission’s Directorate-General for Environment; the European Environment Agency; the Joint Research Centre; as well as science and policy interface platforms, such as the EU Biodiversity Platform; and also organisations and programmes, e.g. Biodiversa+ and EuropaBON, which are engaged in biodiversity monitoring, protection and restoration. The policy briefs are also to be of particular use to national research funds in the European Union.

One of the newly published policy briefs, titled “Uniting FAIR data through interlinked, machine-actionable infrastructures”, highlights the potential benefits derived from enhanced connectivity and interoperability among various types of biodiversity data. The publication includes a list of recommendations addressed to policy-makers, as well as nine key action points. Understandably, amongst the main themes are those of wider international cooperation; inclusivity and collaboration at scale; standardisation and bringing science and policy closer to industry. Another major outcome of the BiCIKL project: the Biodiversity Knowledge Hub portal is noted as central to many of these objectives and tasks in its role of a knowledge broker that will continue to be maintained and updated with additional FAIR data-compliant services as a living legacy of the collaborative efforts at BiCIKL.

The second policy brief, titled “Liberate the power of biodiversity literature as FAIR digital objects”, shares key actions that can liberate data published in non-machine actionable formats and non-interoperable platforms, so that those data can also be efficiently accessed and used; as well as ways to publish future data according to the best FAIR and linked data practices. The recommendations highlighted in the policy brief intend to support decision-making in Europe; expedite research by making biodiversity data immediately and globally accessible; provide curated data ready to use by AI applications; and bridge gaps in the life cycle of research data through digital-born data. Several new and innovative workflows, linkages and integrative mechanisms and services developed within BiCIKL are mentioned as key advancements created to access and disseminate data available from scientific literature. 

While all policy briefs and factsheets – both primarily targeted at non-expert decision-makers who play a central role in biodiversity research and conservation efforts – are openly and freely available on the project’s website, the most important contributions were published as permanent scientific records in a BiCIKL-branded dedicated collection in the peer-reviewed open-science journal Research Ideas and Outcomes (RIO). There, the policy briefs are provided as both a ready-to-print document (available as supplementary material) and an extensive academic publication.

Currently, the collection: “Towards interlinked FAIR biodiversity knowledge: The BiCIKL perspective” in the RIO journal contains 60 publications, including policy briefs, project reports, methods papers, conference abstracts, demonstrating and highlighting key milestones and project outcomes from along the BiCIKL’s journey in the last three years. The collection also features over 15 scientific publications authored by people not necessarily involved in BiCIKL, but whose research uses linked open data and tools created in BiCIKL. Their publications were published in a dedicated article collection in the Biodiversity Data Journal.

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Visit the Biodiversity Community Integrated Knowledge Library (BiCIKL) project’s website at: https://bicikl-project.eu/.

Don’t forget to also explore the Biodiversity Knowledge Hub (BKH) for yourself at: https://biodiversityknowledgehub.eu/ and watch the BKH’s introduction video. 

Highlights from the BiCIKL project are also accessible on Twitter/X from the project’s hashtag: #BiCIKL_H2020 and handle: @BiCIKL_H2020.

Pensoft wishes “Happy 90th birthday!” to thrips expert Dr. Laurence Mound

To date, Dr. Laurence Mound is the most prolific thrips researcher in history and has made monumental contributions to the field.

Today, Pensoft celebrates one of its most distinguished editors and the world’s leading authority on thrips: Dr. Laurence Mound on the occasion of his 90th birthday.

Born in Willesden, London, on 22 April 1934, Dr. Mound is considered a world authority in the field. Having received his PhD from the University of London, he has been studying the biology and systematics of the order Thysanoptera for more than six decades. His academic recognitions include honorary membership at both the Royal and the Australian Entomological societies.

To date, Dr. Laurence Mound is the most prolific thrips researcher in history and has made monumental contributions to the field as the author of 500 publications, including landmark papers that have since shaped our understanding of the taxonomy and evolution of thrips. He has also published a number of books on thrip identification and control.

Having worked with admirable devotion and persistence to advance the knowledge of thrips on a global scale, Dr. Mound has described over 700 species and 100 genera. His studies have helped with species identifications in important pest groups, which in turn has had a pivotal role in the management of pests and the prevention of the establishment of new pest species.

One of the first-ever entomologists to join the ZooKeys editorial team, Mound has been the journal’s go-to editor for the order Thysanoptera for more than a decade. He oversaw the publication of 18 research papers at ZooKeys. He has also authored 11 articles in the journal, including especially valuable identification keys of different taxa from across the globe. He has also been one of the journal’s active reviewers.

Other journals published by Pensoft have also benefited from Mound’s invaluable scientific contributions. Over the years, the renowned thrips expert has also been an author, reviewer, and editor at Deutsche Entomologische Zeitschrift, Biodiversity Data Journal, Check List and Journal of Orthoptera Research.

“As a founder of ZooKeys, I’d like to specially congratulate Laurence on his 90th anniversary and personally thank him for his admirable involvement in our beloved journal. I cannot stress it enough how central dedicated and passionate scientists like him are to have a journal establish itself as a top-quality community-led resource of knowledge. As a fellow entomologist, I’d like to wish him health and good fortune for many years to come; and may the devotion and fascination you have invested in the field extend to each and every aspect of your life!”

says Prof. Dr. Lyubomir Penev, founder/CEO of Pensoft and founding editor of ZooKeys.

“As Editor-in-Chief of ZooKeys, I wish you a ‘Happy 90th birthday!’ and thank you for your dedication and support of the journal since its very early days,”

says Dr. Torsten Dikow, Editor-in-Chief at ZooKeys and research entomologist and curator at the Smithsonian National Museum of Natural History (USA).

“It was Laurence Mound who suggested my name to replace him as subject editor for Thysanoptera at ZooKeys five years ago. Since then, Laurence has actively continued to be a major contributor of both papers and reviews to the journal. It is an honour to share his friendship and to be able to continually receive his support, encouragement and guidance over the years. I would like to express my gratitude and wish an excellent birthday to this researcher who inspires all of us who study Thysanoptera and entomology in general,”

says Prof. Dr. Elison Lima, Adjunct professor at Universidade Federal do Piauí (Brazil) and fellow thrips expert.

“We are truly honoured to have been working with Laurence all these years! His passion and dedication have left a permanent mark on the field of entomology. We toast to the future success and happiness of a dear friend, editor, and author. May his work continue to inspire many more generations of entomologists and conservationists,”

adds Pensoft’s editorial team.

Study on mysterious Amazon porcupine can help its protection

After 22 years of relative obscurity, this research uncovers vital information about its distribution, phylogenetics, and potential conservation threats.

Porcupines of the genus Coendou are arboreal, herbivorous, nocturnal rodents distributed in tropical and subtropical regions of the Americas. Most of what we currently know on them is restricted to species that occur near urban areas, and we still have a lot to learn about these fascinating animals.

Recently, a new study shed light on a very unknown neotropical porcupine species. Roosmalens’ dwarf porcupine (Coendou roosmalenorum) is the smallest porcupine species we know, with blackish monocolored bristles on the tail which confers a blackish color to it, but apart from its appearance, we didn’t know much about it until recently.

A preserved specimen of Coendou roosmalenorum.

“This species was described in 2001 and our paper is the first scientific report after this date, which means nothing was discovered about Roosmalen’s porcupine in a 22-year period,” says Fernando Heberson Menezes, the lead author of a study that was just published in the open-access journal ZooKeys.

“Before our research, we had only a morphological description of the species, with a little information about its distribution and natural history, and nothing about population ecology or conservation threats.”

Using DNA sequencing and exploring data on its occurrences, Fernando and his team were able to uncover new facts about the enigmatic animal.

Thanks to their study, we now know more about its distribution in the Madeira biogeographical province in the Amazon Forest. “With this information, we raised the hypothesis this species is endemic to Madeira Province, which is important for predicting where we can find this species and the possible threats affecting its population or its distribution,” says Fernando.

Distribution of Caaporamys roosmalenorum in Brazilian Amazonia. The new record (locality 1) is the southeastern most record for the species, from Mato Grosso state, Brazil. The darker gray area represents the Madeira Province sensu Morrone et al. (2022).

At the same time, they found Roosmalens’ dwarf porcupine at new locations in the Amazon rainforest, which suggests that its distribution in southern Amazonia is wider than suspected.

Their phylogenetic analysis – the study of the species’ evolutionary history and relationships with other species – confirmed that the species is a member of the subgenus Caaporamys . This is important, the researchers say, because the classification of the genus Coendou had been “historically chaotic” until the last few years.

The information in this study opens up numerous opportunities for further researching this species. “We can think of ways to answer very basic scientific questions such as ‘how does Roosmalen’s porcupine use space?’ or ‘what does it eat?’, some more advanced questions such as ‘how did it evolve?,’ or applied questions such as ‘what are the major threats for its conservation?,’ or ‘how can we use it as a model to know more about the health of the Amazon forest?’, says Fernando in conclusion.

Original source:

Menezes FH, Semedo TBF, Saldanha J, Garbino GST, Fernandes-Ferreira H, Cordeiro-Estrela P, da Costa IR (2023) Phylogenetic relationships, distribution, and conservation of Roosmalens’ dwarf porcupine, Coendou roosmalenorum Voss & da Silva, 2001 (Rodentia, Erethizontidae). ZooKeys 1179: 139-155. https://doi.org/10.3897/zookeys.1179.108766

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Europe’s very own dinosaurs – the enigmatic Late Cretaceous rhabdodontids

Despite being widespread and abundant, these gregarious herbivores vanished in Western Europe around 69 million years ago due to environmental changes, while surviving longer in Eastern Europe.

When you think of dinosaurs, you might automatically imagine iconic dinosaurs as Tyrannosaurus and Triceratops. But at the same time when these were stomping on the ancient coastal plains of North America, some of their very distant cousins were reigning over Europe’s lands.

Life reconstructions and size comparison of three rhabdodontids. From left to right: Mochlodon suessi from eastern Austria (the smallest member of the group), Rhabdodon priscus from southern France (the largest member of the group), and Transylvanosaurus platycephalus from western Romania (the most recently named member of the group). Also shown is the silhoutte of a human (1.8 m tall) for scale. Reconstruction by Peter Nickolaus

During the Late Cretaceous (between 100 and 66 million years ago), Europe was an extensive archipelago with numerous small and large islands situated in a shallow tropical sea, the so-called Late Cretaceous European Archipelago. The dinosaur groups that lived on these islands were very different from those of other continents, often being much smaller than their mainland relatives. These European dinosaurs include small and medium-sized carnivorous theropods, armoured ankylosaurs, long-necked sauropods, duck-billed hadrosaurs, and rhabdodontids.

Skeletal reconstruction of Zalmoxes robustus. Scale bar: 20 cm

Arguably one of the most important of these European dinosaur groups is the family Rhabdodontidae, which groups together the most common medium-sized herbivores of the Late Cretaceous European Archipelago. A joint research team from the Universities of Tübingen (Germany), Budapest (Hungary) and Bucharest (Romania) recently reviewed what we know about these peculiar dinosaurs in a new paper published in the journal Fossil Record.

Generally, rhabdodontid dinosaurs were small to medium-sized animals with an overall body length of approximately 2–6 m. “They were probably habitually bipedal herbivores, characterised by a rather stocky build, with strong hind limbs, short forelimbs, a long tail, and a comparatively large, triangular skull that tapers anteriorly and ends in a narrow snout,” explains Felix Augustin, lead author of the study in Fossil Record.

“They had a relatively robust skull with strong jaws, large teeth and a pointy beak that was covered in keratin, demonstrating that these dinosaurs were well-adapted to eating tough plants.”

In some instances, fossil remains of several individuals of different ages have been found together, indicating that they were gregarious.

Although they died out well before the mass extinction in Western Europe (about 69 million years ago), potentially due to environmental changes that affected the plants they fed on, they survived much longer in Eastern Europe and were among the last non-avian dinosaurs still present before the end of the Cretaceous (66 million years ago).

Interestingly, fossils of rhabdodontids have only been found in Europe and only in rocks ranging in age from 86–66 million years ago, so they were endemic to the Late Cretaceous European Archipelago.

The group currently comprises nine different species from five European countries (France, Spain, Austria, Hungary, and Romania).

Palaeogeographic map of Europe during the latest Cretaceous (late Campanian), with the location of the most important rhabdodontid-bearing assemblages. 1 Transylvania, western Romania. 2 Iharkút, western Hungary. 3 Muthmannsdorf, eastern Austria. 4 Eastern southern France. 5 Western southern France. 6 Northern Spain. 7 Central Spain.

“The first rhabdodontid species was scientifically named more than 150 years ago and the last one as recently as November 2022, so, although the group looks back to a long research history, we still have much to learn about it,” says Felix Augustin.

“Generally, our portraying of the world of dinosaurs is heavily biased towards the well-known North-American and Asian dinosaur faunas,” he adds.

Type specimens of some rhabdodontid species. A. The original drawing of the lectotype of Rhabdodon priscus, MPLM 30, a partial left dentary. The specimen has since deteriorated (Pincemaille-Quillevere 2002). Modified after Matheron (1869). B. Holotype of Rhabdodon septimanicus, MDE D-30, an incomplete right dentary. Photo kindly provided by Eric Buffetaut. C. Lectotype of Mochlodon suessi, PIUW 2349/2, a right dentary. D. Holotype of Mochlodon vorosi, MTM V 2010.105.1, a left dentary. E. Holotype of Zalmoxes robustus, NHMUK R.3392, a right dentary. Photo kindly provided by János Magyar. F. Holotype right dentary of Zalmoxes shqiperorum, NHMUK R.4900. Note that the holotype of Z. shqiperorum also comprises several postcranial elements that presumably belong to the same individual as the dentary. Photo kindly provided by János Magyar.

Dinosaur fossils from the Late Cretaceous are much rarer in Europe than in North America or Asia, and thus far no complete skeleton of a rhabdodontid has been described. Even though they were so abundant and common in the Upper Cretaceous of Europe, several key aspects about them remain poorly known, including their detailed body proportions, their posture and locomotion, as well as their feeding behaviour.

“In the past decades, a wealth of new, and often well-preserved, rhabdodontid fossils has been discovered throughout Europe, the majority of which still remains to be studied,” says Felix Augustin. “A joint research project is currently underway to study the available fossil material in order to gain new insights into the evolution and lifestyle of these fascinating yet still poorly known dinosaurs.”

Original source:

Augustin FJ, Ősi A, Csiki-Sava Z (2023) The Rhabdodontidae (Dinosauria, Ornithischia), an enigmatic dinosaur group endemic to the Late Cretaceous European Archipelago. Fossil Record 26(2): 171-189. https://doi.org/10.3897/fr.26.108967

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