Category: Evolutionary Systematics

Conferences across the continents: Pensoft’s events in Autumn 2023

Pensoft participated in several events all around the world in October and November 2023.

October and November 2023 were active months for the Pensoft team, who represented the publisher’s journals and projects at conferences in Europe, North America, South America, Oceania and Asia.

Let’s take a look back at all the events of the past two months.

The Biodiversity Information Standards Conference 2023

The Biodiversity Information Standards (TDWG) Conference, held from October 9-13 in Tasmania, Australia, brought together experts and stakeholders from the global biodiversity research community.

The annual gathering is a crucial platform for sharing insights, innovations, and knowledge related to biodiversity data standards and practices. Key figures from Pensoft took part in the event, presenting new ways to improve the management, accessibility, and usability of biodiversity data. 

Prof. Lyubomir Penev, founder and Chief Executive Officer of Pensoft, gave two talks that highlighted the importance of data publishing. His presentation on “The Biodiversity Knowledge Hub (BKH): A Crosspoint and Knowledge Broker for FAIR and Linked Biodiversity Data” underscored the significance of FAIR (Findable, Accessible, Interoperable, and Reusable) data standards. BKH is the major output from the Horizon 2020 project BiCIKL (Biodiversity Community Integrated Knowledge Library) dedicated to linked and FAIR data in biodiversity, and coordinated by Pensoft.

Prof. Lyubomir Penev, Pensoft founder and CEO.

He also introduced the Nanopublications for Biodiversity workflow and format: a promising new tool developed by Knowledge Pixels and Pensoft to communicate key scientific statements in a way that is human-readable, machine-actionable, and in line with FAIR principles. Earlier this year, Biodiversity Data Journal integrated nanopublications into its workflow to allow authors to share their findings even more efficiently.

Chief Technology Officer of Pensoft Teodor Georgiev contributed to the conference by presenting “OpenBiodiv for Users: Applications and Approaches to Explore a Biodiversity Knowledge Graph.” His session highlighted the innovative approaches being taken to explore and leverage a biodiversity knowledge graph, showcasing the importance of technology in advancing biodiversity research.

Teodor Georgiev (right), Pensoft CTO.

Many authors and editors at Biodiversity Data Journal also spoke at the TDWG conference, including Vince Smith, the journal’s editor-in-chief, who is Head of Digital, Data, and Informatics at the Natural History Museum. He delivered insightful presentations on digitising natural science collections and utilising AI for insect collections.

GEO BON Global Conference 2023

GEO BON’s Global Conference on Biodiversity and Monitoring took place from 10-13 October 2023 in Montreal, Canada.

Metabarcoding and Metagenomics editor-in-chief, Florian Leese.

The theme of the conference was “Monitoring Biodiversity for Action” and there was particular emphasis on the development of best practices and new technologies for biodiversity observations and monitoring to support transformative policy and conservation action.

Metabarcoding & Metagenomics’ editor-in-chief, Florian Leese, was one of the organisers of the “Standardized eDNA-Based Biodiversity Monitoring to Inform Environmental Stewardship Programs” session. Furthermore, the journal was represented at Pensoft’s exhibition booth, where conference participants were able to discuss metabarcoding and metagenomics research.

Following the conference, Metabarcoding & Metagenomics announced a new special issue titled “Towards Standardized Molecular Biodiversity Monitoring.” The special issue is accepting submissions until 15th March 2024.

Asian Mycological Congress 2023

The Asian Mycological Congress welcomed researchers from around the world to Busan, Republic of Korea, for an exploration of all things fungi from 10-13 October. 

MycoKeys Best Talk award (winner not pictured).

Titled “Fungal World and Its Bioexploitation – in all areas of basic and applied mycology,” the conference covered a range of topics related to all theoretical and practical aspects of mycology. There was a particular emphasis on the development of mycology through various activities associated with mycological education, training, research, and service in countries and regions within Asia.

As one of the sponsors of the congress, Pensoft proudly presented a Best Talk award to Dr Sinang Hongsanan of Chiang Mai University, Thailand. The award entitles the winner to a free publication in Pensoft’s flagship mycology journal, MycoKeys.

Joint ESENIAS and DIAS Scientific Conference 2023

The ESENIAS and DIAS conference took place from 11-14 October and focused on “globalisation and invasive alien species in the Black Sea and Mediterranean regions.” Pensoft shared information on their NeoBiota journal and the important REST-COAST and B-Cubed projects.

Polina Nikova receiving the NeoBiota Best Talk Award.

Polina Nikova of the Bulgarian Academy of Sciences received the NeoBiota Best Talk Award for her presentation titled “First documented records in the wild of American mink (Neogale vision von Schreber, 1776) in Bulgaria.” The award entitles her to a free publication in the NeoBiota journal.

XII European Congress of Entomology

Pensoft took part in the XII European Congress of Entomology (ECE 2023) in Heraklion, Crete, from 16-20 October. The event provided a forum for entomologists from all over the world, bringing together over 900 scientists from 60 countries.

Carla Stoyanova, Teodor Metodiev and Boriana Ovcharova representing Pensoft.

The ECE 2023, organised by the Hellenic Entomological Society, addressed the pressing challenges facing entomology, including climate change, vector-borne diseases, biodiversity loss, and the need to sustainably feed a growing world population. The program featured symposia, lectures, poster sessions, and other types of activities aimed at fostering innovation in entomology. For Pensoft, they were a great opportunity to interact with scientists and share their commitment to advancing entomological research and addressing the critical challenges in the field.

Throughout the event, conference participants could find Pensoft’s team at thir booth, and learn more about the scholarly publisher’s open-access journals in entomology. In addition, the Pensoft team presented the latest outcomes from the Horizon 2020 projects B-GOOD, Safeguard, and PoshBee, where the publisher takes care of science communication and dissemination as a partner.

XIV International Congress of Orthopterology 2023

The XIV International Congress of Orthopterology, held from 16-19 October in Mérida, Yucatán, México, was a landmark event in the field of orthopterology.

Group photo of XIV International Congress of Orthopterology 2023 participants.

Hosted for the first time in Mexico, it attracted experts and enthusiasts from around the world. The congress featured plenary speakers who presented cutting-edge research and insights on various aspects of grasshoppers, crickets, and related insects.

Pensoft’s Journal of Orthoptera Research was represented by Tony Robillard, the editor-in-chief, who presented the latest developments of the journal to attendees.

Symposia, workshops, and meetings facilitated discussions on topics like climate change impacts, conservation, and management of Orthoptera. The event also included introductions to new digital and geospatial tools for Orthoptera research.

The 16th International Conference on Ecology and Management of Alien Plant Invasions

The 16th International Conference on Ecology and Management of Alien Plant Invasions (EMAPI 2023) took place in Pucón, Chile, from 23-25 October . The conference focused on the promotion of diversity in the science and management of biological invasions. Several NeoBiota authors ran sessions at the conference, and the journal also presented a Best Talk Award.

4th International ESP Latin America and Caribbean Conference

The 4th International ESP Latin America and Caribbean Conference (ESP LAC 2023) was held in La Serena, Chile, from 6-10 November. Focused on “Sharing knowledge about ecosystem services and natural capital to build a sustainable future,” the event attracted experts in ecosystem services, particularly from Latin America and the Caribbean.

Organised by the Ecosystem Services Partnership, this bi-annual conference was open to both ESP members and non-members, featuring a hybrid format in English and Spanish. Attendees enjoyed an excursion to La Serena’s historical center, adding a cultural dimension to the event.

The conference included diverse sessions and a special recognition by Pensoft’s One Ecosystem journal, which awarded full waivers for publication to the authors of the three best posters.

Magaly Aldave receiving the Best Poster Award.

Magaly Aldave of the Transdisciplinary Center for FES-Systemic Studies claimed first prize with “The voice of children in the conservation of the urban wetland and Ramsar Site Pantanos de Villa in Metropolitan Lima, Peru.” Ana Catalina Copier Guerrero and Gabriela Mallea-Rebolledo, both of the University of Chile, were awarded second and third prize respectively.

Biosystematics 2023

Biosystematics 2023, held from 26-30 November at the Australian National University in Canberra, was a collaborative effort of the Australian Biological Resources Study, Society of Australian Systematic Biologists, Australasian Mycological Society, and Australasian Systematic Botany Society. Themed “Celebrating the Past | Planning the Future,” the conference provided a platform for exploring advancements in biosystematics.

The event featured in-person and online participation, catering to a wide audience of researchers, academics, and students. It included workshops, presentations, and discussions, with a focus on enhancing understanding in biosystematics.

Pensoft awarded three student prizes at the event. Putter Tiatragu, Australian National University, received the Best Student Talk award and a free publication in any Pensoft journal for “A big burst of blindsnakes: Phylogenomics and historical biogeography of Australia’s most species-rich snake genus.”

Helen Armstrong, Murdoch University, received the Best Student Lightning Talk for “An enigmatic snapper parasite (Trematoda: Cryptogonimidae) found in an unexpected host.” Patricia Chan, University of Wisconsin-Madison, was the Best Student Lightning Talk runner-up for “Drivers of Diversity of Darwinia’s Common Scents and Inflorescences with Style: Phylogenomics, Pollination Biology, and Floral Chemical Ecology of Western Australian Darwinia (Myrtaceae).”

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As we approach the end of 2023, Pensoft looks back on its most prolific and meaningful year of conferences and events. Thank you to everyone who contributed to or engaged with Pensoft’s open-access journals, and here’s to another year of attending events, rewarding important research, and connecting with the scientific community.

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Science in the sunshine: Pensoft’s month of European conferences

Pensoft participated in five conferences across Germany and Italy in September 2023.

For the Pensoft team, September 2023 was a busy and exciting month filled with conferences. Travelling across Europe, they promoted journals, connected with the scientific community, and rewarded exceptional research with free article publications. 

Let’s take a look back at all the events of the past month.

Wildlife Research and Conservation 2023

Wildlife Research and Conservation 2023 took place in Berlin between the 9th and 11th of September. Jointly organised by the Leibniz Institute for Zoo and Wildlife Research, the European Association of Zoos and Aquaria and WWF Germany, it was a fantastic event, featuring an exchange of ideas between wildlife scientists from different disciplines related to mammalian species.

Image showing the WRC2023 logo and two women promoting Pensoft at a conference.
Pensoft representatives Mrs. Boriana Ovcharova and Mrs. Anna Sapundzhieva, ready to greet attendees in the sun.

The conference looked at evolutionary adaptations from the perspective of behavioural ecology, reproduction biology, genetics, physiology, as well as nature conservation. It particularly focused on the pressing issues of wildlife research and species conservation in the context of global environmental change. Most of the ≈100 participants were young scientists from more than 30 countries.

The Pensoft team greeted fellow attendees with an exhibition stand and presented the conservation and ecology-focused journals Neobiota, Nature Conservation, One Ecosystem, and Biodiversity Data Journal. Pensoft also advocated for EuropaBon, who are designing an EU-wide framework for monitoring biodiversity and ecosystem services, and REST-COAST, whose mission is to provide the tools to restore environmental degradation of rivers and coasts. Within both European-funded initiatives, Pensoft is a key dissemination partner that contributes expertise in science communication, scholarly publishing, and the development of digital tools and platforms.

Man holding a certificate.
Joao Pedro Meireles posing with his Best Poster award.

Pensoft presented Joao Pedro Meireles from Utrecht University with the Best Poster Award for his research on pair compatibility in okapis, entitling him to a free publication in one of Pensoft’s open-access journals.

“My study looked at pair compatibility in the zoo breeding programme of Okapi. During breeding introductions, sometimes the male becomes aggressive towards the female and we decided to investigate the potential factors. We ran a survey among all zoos that house the species in Europe and we found that differences in husbandry were linked to the aggressiveness performed by the males.”

Joao Pedro Meireles, Utrecht University

GfÖ Annual Meeting 2023

From the 12th to 16th of September, the German Centre for Integrative Biodiversity Research hosted the 52nd Annual Meeting of the Ecological Society of Germany, Austria and Switzerland in Leipzig, Germany. The meeting welcomed more than 1,100 participants from around the world, including scientists, policymakers, educators, and environmental enthusiasts.

This year’s meeting was held with the theme: “The future of biodiversity – overcoming barriers of taxa, realms and scales.” There was a particular emphasis on future challenges and opportunities facing biodiversity, and how to address and manage these in an interdisciplinary and integrative way. 

Woman standing beside man.
Mrs. Boriana Ovcharova (Pensoft) with Neobiota Editor-in-Chief Prof. Dr. Ingolf Kühn.

Conference participants were welcomed at the Pensoft stand, where they could learn more about the projects EuropaBon and SELINA, which deal with biodiversity, ecosystem and natural capital topics. 

The Pensoft team took great pleasure in talking to attendees about their fantastic journals focused on ecology and biodiversity, including Food and Ecological Systems Modelling Journal, Neobiota, Nature Conservation, One Ecosystem, Vegetation Classification and Survey and Research Ideas and Outcomes, as well as meeting with authors, reviewers and editors.

European Conference on Ecological Modelling

Also in Leipzig, the European Conference on Ecological Modelling took place between the 4th and 8th of September. The event focused on the transformation of how societies deal with natural resources in a world where biodiversity and ecosystem services are at high risk. 

The ECEM 2023 continued a series of conferences launched by the European chapter of ISEM, the International Society for Ecological Modelling. ISEM promotes the international exchange of ideas, scientific results, and general knowledge in the areas of systems’ analysis and simulations in ecology, and the application of ecological modelling for natural resource management.

Pensoft presented its innovative journals in the field of ecology and modelling, such as Nature Conservation, Food and Ecological Systems Modelling Journal and Neobiota, as well as the projects PoshBee and B-GOOD, which aim to help beekeepers and support healthy bee populations where Pensoft acts as the dissemination partner.

The Bundesinstitut für Risikobewertung team presented a poster on the Formal Model format and potential new MiDox formats, unique publication types that can be submitted to Pensoft’s Food and Ecological Modelling Journal.

118th Congress of the Italian Botanical Society

Three men sitting before a projector screen at a conference.
Speakers at the 118th Congress of the Italian Botanical Society.

Pensoft was proud to sponsor the 118th Congress of the Italian Botanical Society, which took place in Pisa, Italy from the 13th to 16th of September. Experts in various fields of Botany gathered to share their research on the following topics:

  • Molecular and cell biology
  • Taxonomy, systematics and evolution
  • Biodiversity
  • Environmental monitoring and policies
  • Biotechnology and applied botany
  • Ecology

Pensoft awarded Emma Cocco, University of Cagliari, and Lucrezia Laccetti, University of Naples Federico II, a free article publication in any of Pensoft’s journals related to botany.  Additionally, Silvia Cannucci, University of Siena, and Flavia Guzzi received the Italian Botanical Society’s support for publishing papers in Italian Botanist for their excellent research.

Four people at a certificate presentation.
Best poster award, presented by Pensoft.

94th Annual Meeting of the Paläontologische Gesellschaft

Finally, between the 18th and 22nd of September, the 94th Annual Meeting of the Paläontologische Gesellschaft was held in Jena, Germany. Pensoft couldn’t make it in person, but still made sure to showcase journals publishing papers in palaeontology, especially Zitteliana and Fossil Record. The international meeting was a great success, and focused on cutting-edge research from palaeobiology, palaeontology, geobiology and related subjects.

Journals promoted by Pensoft at the 94th Annual Meeting of the Paläontologische Gesellschaft.

Summer may be well and truly over, but as a new academic year begins, Pensoft looks forward to attending more conferences, rewarding more incredible research, and connecting with more of the scientific community. Thank you to everyone who contributed to or engaged with Pensoft’s open-access journals this year, and here’s to a successful final quarter of 2023.

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The Venom Spider: new genus named after Tom Hardy’s Marvel character

Researchers referenced the British actor and Spider-Man villain due the unusual pattern on the Australian arachnid’s abdomen.

Venomius tomhardyi pictured next to an illustration of Tom Hardy’s Venom character.
Photo by Rossi et al. Illustration by Zeeshano0 via Pixabay.

Tom Hardy and his Marvel character Venom have given their names to a newly discovered Australian spider. The genus Venomius and its only current species Venomius tomhardyi were described following an expedition to Tasmania.

Scientists MSc Giullia Rossi, Dr Pedro Castanheira and Dr Volker Framenau from Murdoch University ( Perth, Australia) partnered with Dr Renner Baptista from the Federal University of Rio de Janeiro (Brazil) to describe the new genus of orb-weaving spiders published in the open access journal Evolutionary Systematics.

Tom Hardy portrays Eddie Brock and his alter-ego Venom, an antihero closely associated with Spider-Man, across two Marvel films and gives his name to the sole species of the new genus. The distinctive black spots on the arachnid’s abdomen reminded the scientists of Venom’s head, inspiring them to select the unusual name.

Annotated image showing five angles of a spider.
Venomius tomhardyi male holotype. Scale bars: 2 mm (A, B); 0.2 mm (C–E).
Photos by Rossi et al.

The genus belongs to the Araneidae family of spiders, or Araneae, that build upright circular webs to capture prey. Despite resembling the related genus Phonognatha as both do not have tubercles on the abdomen, the newly described spiders are distinct in their behaviour of creating silk-lined holes in the branches of trees for shelter, as well as their different genitalia.

The holotype of the new species was discovered and subsequently preserved at the Queen Victoria Museum and Art Gallery following an expedition to Tasmania, Victoria, South Australia and Western Australia.

“This is part of a long-term research that aims to document the entire Australian spider fauna, which will be of extreme importance for conservation management plans and the continuation of the decadal plan for taxonomy and biosystematics in Australia and New Zealand.”

Dr. Pedro Castanheira, contributing author.
Distribution records of Venomius tomhardyi.
Image by Rossi et al.

Researchers also sourced supplementary specimens from scientific arachnology collections, with researchers examining approximately 12,000 records in Australian and overseas institutions.

“It is really important to keep describing new spiders to assess the total biodiversity of these predators in Australia,” added the study’s first author MSc Giullia Rossi.

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Original source:

Rossi GF, Castanheira PS, Baptista RLC, Framenau VW (2023) Venomius, a new monotypic genus of Australian orb-weaving spiders (Araneae, Araneidae). Evolutionary Systematics 7(2): 285-292. https://doi.org/10.3897/evolsyst.7.110022

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Follow the Evolutionary Systematics journal on Twitter and Facebook.

A new “groins of fire” frog, from the Peruvian Amazon

“When we found this new species in the Amazon lowlands of central Peru, we were quite surprised and kind of speechless.”

Guest blog post by Germán Chávez

As a South American herpetologist, it is inevitable to be absolutely buzzed every time I hear “Germán, you have to go to the Amazon jungle”. Going to the Amazon forest in Peru is perhaps the most joyful way to do your work. The chances to find so many frogs, lizards, snakes, turtles, and even caimans are really high, so one can’t help but get excited.

The Agua Blanca forest. Photo by Germán Chávez

The thing is, to someone like me who focuses their work on describing new species, the expectations shouldn’t be that high. The Amazon has always been a place full of mysteries, so many explorers, seduced by its enigmatic atmosphere, have gone deeper and deeper into the Amazonia. This has resulted in the description of so many species and very few unexplored places left.

So, when Wilmar Aznaran and I found this new species in the Amazon lowlands of central Peru, a well-visited area, we were quite surprised and kind of speechless. I have to confess that my reaction was “Bloody hell!” Externally, the frog is clearly different from any other similar species, and that was evident for us at the very moment we caught it. Indeed, the first option for the title of our new paper in Evolutionary Systematics was “Expect the unexpected: a new treefrog from the Amazon lowlands of Peru.” We could not believe that a medium-sized arboreal frog had passed in front of other researchers’ eyes, and remained unseen.

Scinax pyroinguinis. Photo by Germán Chávez

Soon we found out that it is not a common species in the area: after catching two individuals, we were unable to find more. Not ready to give up, we went once more time to that site a few months later and our efforts to find it were unsuccessful, so we suggest it is not a common frog.

At that point, we knew that we had a new species on hands, but describing it with only two specimens was challenging. Luis A. García-Ayachi went to the area and his efforts were also unsuccessful. That is when Alessandro Catenazzi joined us, so we decided to add an integrative approach to our work, basing our research on morphological and genetic differences. I can only say thanks to all our co-authors: from then on, everything started to work out.

Scinax pyroinguinis. Photo by Germán Chávez

We noticed there were wildfires in the area, are a serious threat to the frog’s habitat. So it is really curious that the orange pattern on the groins, thighs and shanks of the new species, resembles flames, like those threatening its habitat. No better name for our frog than Scinax pyroinguinis, which literally means “groins of fire”.

Scinax pyroinguinis. Photo by Germán Chávez
A wildfire in the frog’s habitat. Photo by Luis A. García-Ayachi

We hope that this discovery encourages people  and institutions to protect these remnant forests in central Peru, because they may yet harbour unknown species. If these forests disappear, we will probably lose a diversity that we do not even know now yet, and may never will. It is sort of a race against deforestation and habitat loss, but this doesn’t mean there’s nothing we can do. Research like ours is really important to help put the focus on this place, at least in the short term, and try to attract people to join forces in the conservation of Scinax pyroinguinis and its habitat.

Research article:

Chávez G, Aznaran W, García-Ayachi LA, Catenazzi A (2023) Rising from the ashes: A new treefrog (Anura, Hylidae, Scinax) from a wildfire-threatened area in the Amazon lowlands of central Peru. Evolutionary Systematics 7(1): 183-194. https://doi.org/10.3897/evolsyst.7.102425

New spider genus named after pop band ABBA

Two ABBA-mad arachnologists from Murdoch University in Perth, Australia, have described a new genus dedicated to the famous band.

Spiders of the family Araneidae are known for building vertical orbicular webs to catch upon prey. They can be easily identified by their eye pattern, the abdomen normally overlapping the carapace, and complex genitalia. The family currently has 188 genera and 3,119 species worldwide.

Two scientists from Murdoch University in Perth (Australia), Dr Pedro Castanheira and Dr Volker Framenau, described a new spider genus of Araneids following a comprehensive study of orb-weaving spiders found in Australian zoological collections. They named it after one of their favourites bands, the Swedish pop group ABBA, paying tribute to the band members Agnetha Fältskog, Björn Ulvaeus, Benny Andersson, and Anni-Frid Lyngstad.

The band’s “songs and subsequent musicals Mamma Mia! (2008) and Mamma Mia – Here We Go again! (2018), provided hours of entertainment for the authors,” they explain in their study, which was published in the journal Evolutionary Systematics.

Abba transversa. Photo by Volker Framenau

The new genus is composed of a relatively small single species (ca. 3-4 mm), Abba transversa (Rainbow, 1912), whose specimens are currently known from the coastal area of New South Wales and Queensland. It is differentiated from other species within the family by the presence of two dark spots in the middle of abdomen and by the thick macrosetae on the first pair of legs of the males.

The description comes after 15 years of scientific work, with the researchers looking at 12,000 records in Australian museums and overseas collections.

“Describing new taxa is vital for conservation management plans to assess biodiversity and protect forests areas across Australia,” says study author Dr Pedro Castanheira. “Currently, 80% of Australian spider species are unknown, and many of the described ones are misplaced in different genera, like Abba transversa used to be.”

Original source:

Castanheira PS, Framenau VW (2023) Abba, a new monotypic genus of orb-weaving spiders (Araneae, Araneidae) from Australia. Evolutionary Systematics 7(1): 73-81. https://doi.org/10.3897/evolsyst.7.98015

Follow Evolutionary Systematics on Facebook and Twitter.

Pensoft among the first 27 publishers to share prices & services via the Journal Comparison Service by Plan S

All journals published by Pensoft – each using the publisher’s self-developed ARPHA Platform – provide extensive and transparent information about their costs and services in line with the Plan S principles.

In support of transparency and openness in scholarly publishing and academia, the scientific publisher and technology provider Pensoft joined the Journal Comparison Service (JCS) initiative by cOAlition S, an alliance of national funders and charitable bodies working to increase the volume of free-to-read research. 

As a result, all journals published by Pensoft – each using the publisher’s self-developed ARPHA Platform – provide extensive and transparent information about their costs and services in line with the Plan S principles.

The JCS was launched to aid libraries and library consortia – the ones negotiating and participating in Open Access agreements with publishers – by providing them with everything they need to know in order to determine whether the prices charged by a certain journal are fair and corresponding to the quality of the service. 

According to cOAlition S, an increasing number of libraries and library consortia from Europe, Africa, North America, and Australia have registered with the JCS over the past year since the launch of the portal in September 2021.

While access to the JCS is only open to librarians, individual researchers may also make use of the data provided by the participating publishers and their journals. 

This is possible through an integration with the Journal Checker Tool, where researchers can simply enter the name of the journal of interest, their funder and affiliation (if applicable) to check whether the scholarly outlet complies with the Open Access policy of the author’s funder. A full list of all academic titles that provide data to the JCS is also publicly available. By being on the list means a journal and its publisher do not only support cOAlition S, but they also demonstrate that they stand for openness and transparency in scholarly publishing.

“We are delighted that Pensoft, along with a number of other publishers, have shared their price and service data through the Journal Comparison Service. Not only are such publishers demonstrating their commitment to open business models and cultures but are also helping to build understanding and trust within the research community.”

said Robert Kiley, Head of Strategy at cOAlition S. 

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About cOAlition S:

On 4 September 2018, a group of national research funding organisations, with the support of the European Commission and the European Research Council (ERC), announced the launch of cOAlition S, an initiative to make full and immediate Open Access to research publications a reality. It is built around Plan S, which consists of one target and 10 principles. Read more on the cOAlition S website.

About Plan S:

Plan S is an initiative for Open Access publishing that was launched in September 2018. The plan is supported by cOAlition S, an international consortium of research funding and performing organisations. Plan S requires that, from 2021, scientific publications that result from research funded by public grants must be published in compliant Open Access journals or platforms. Read more on the cOAlition S website.

🥳 Here goes THE title in our New Species Showdown!

From the kingdom of plants, welcome the all-time crowd-favourite species ever described in a Pensoft journal!

Which one is the species that springs to mind when you think about the most awesome discoveries in recent times?

In an age where we more than ever need to appreciate and preserve the magnificent biodiversity inhabiting the Earth, we decided to go for a lighter and fun take on the work of taxonomists that often goes unnoticed by the public. 

From the ocean depths surrounding Indonesia to the foliage of the native forests of Príncipe Island and into the soils of Borneo, we started with 16 species described as new to science in journals published by Pensoft over the years. 

Out of these most amazing creatures, over the past several weeks we sought to find who’s got the greatest fandom by holding a poll on Twitter (you can follow it further down here or via #NewSpeciesShowdown).

Grand Finale – here comes the champion!

Truly, we couldn’t have a more epic final!

The two competitors come from two kingdoms, two opposite sides of the globe, and the “pages” of two journals, namely PhytoKeys and Evolutionary Systematics.

While we need to admit that we ourselves expected to crown an animal as the crowd-favourite, we take the opportunity to congratulate the botanists amongst our fans for the well-deserved win of Nepenthes pudica (see the species description)!

Find more about the curious one-of-a-kind pitcher plant in this blog post, where we announced its discovery following the new species description in PhytoKeys in June 2022:

Underground carnivore: the first species of pitcher plant to dine on subterranean prey

Back then, N. pudica gave a good sign about its worldwide web appeal, when it broke the all-time record for online popularity in a competition with all plant species described in PhytoKeys over the journal’s 22-year history of taxonomic papers comrpising over 200 issues.

What’s perhaps even more curious, is that there is only one species EVER described in a Pensoft-published journal that has so far triggered more tweets than the pitcher plant, and that species is the animal that has ended up in second place in the New Species Showdown: a tiny amphibian living in Peru, commonly known as the the Amazon Tapir Frog (Synapturanus danta). Which brings us once again to the influence of botanists in taxonomic research.

Read more about its discovery in the blog post from February 2022:

Frog with tapir-like nose found in Amazon rainforest

Another thing that struck us during the tournament was that there was only one species described in our flagship journal in systematic journal ZooKeys: the supergiant isopod Bathynomus raksasa, that managed to fight its way to the semi-finals, where it lost against S. danta.

This makes us especially proud with our diverse and competitive journal portfolio full of titles dedicated to biodiversity and taxonomic research!

The rules

Twice a week, @Pensoft would announce a match between two competing species on Twitter using the hashtag #NewSpeciesShowdown, where everyone could vote in the poll for their favourie.

Disclaimer

This competition is for entertainment purposes only. As it was tremendously tough to narrow the list down to only sixteen species, we admit that we left out a lot of spectacular creatures.

To ensure fairness and transparency, we made the selection based on the yearly Altmetric data, which covers articles in our journals published from 2010 onwards and ranks the publications according to their online mentions from across the Web, including news media, blogs and social networks. 

We did our best to diversify the list as much as possible in terms of taxonomic groups. However, due to the visual-centric nature of social media, we gave preference to immediately attractive species.

All battles:

(in chronological order)

Round 1
The first tie of the New Species Showdown was between the olinguito: Bassaricyon neblina (see species description) and the “snow-coated” tussock moth Ivela yini (see species description).
In the second battle, we faced two marine species discovered in the Indian Ocean and described in ZooKeys. The supergiant isopod B. raksasa (see species description) won against the Rose Fariy Wrasse C. finifenmaa (see species description) with strong 75%.
In the third battle, we faced two frog species: the tapir ‘chocolate’ frog described in Evolutionary Systematics (see species description) winning against the ‘glass frog’ described in Zookeys (see species description) with 73%.
With 62% of the votes, the two-species tournament saw the Harryplax severus crab grab the win against another species named after a great wizard from the Harry Potter universe: the Salazar’s pit viper, which was described in the journal Zoosystematics and Evolution in 2020. The “unusual” crustacean was described back in 2017 in ZooKeys. As its species characters matched no genus known to date, the species also established the Harryplax genus.
With the fifth battle in the New Species Showdown taking us to the Kingdom of Plants, we enjoyed a great battle between the first pitcher plant found to grow its pitchers underground to dine (see the full study) and the Demon’s orchid, described in 2016 from a single population spread across a dwarf montane forest in southern Colombia (read the study). Both species made the headlines across the news media around the world following their descriptions in our flagship botany journal PhytoKeys.
Next, we saw the primitive dipluran Haplocampa wagnelli (read its species description in Subterranean Biology) – a likely survivor of the Ice Age thanks to the caves of Canada – win the public in a duel against Xuedytes bellus (described in ZooKeys in 2017), also known as the Most cave-adapted trechine beetle in the world!
We had a close battle between the Principe Scops-owl Otus bikegila (see species description published in our ZooKeys earlier in 2022) and the blue-tailed Monitor lizard Varanus semotus (also first ‘known’ from the pages of ZooKeys, 2016). Being adorable species, but also ‘castaways’ on isolated islands in the Atlantic, they made great sensations upon their discovery. In fact, the reptile won with a single vote!
In the last battle of Round 1, the ‘horned’ tarantula C. attonitifer claimed the victory with a strong (80%) advantage from its competitor with a rebel name: the freshwater crayfish C. snowden (species description in ZooKeys from 2015). Described in African Invertebrates in 2019, the arachnid might be one amongst many ‘horned’ baboon spiders, yet there was something quite extraordinary about its odd protuberance. Furthermore, it came to demonstrate how little we know about the fauna of Angola:  a largely underexplored country located at the intersection of several ecoregions.
Round 2 – Quarter-finals
In the first quarter-final round, in the close battle, the isopod ’emerged’ from the ocean depths of Indonesia B. raksasa (species description in Zookeys from 2020) claimed the victory with just a few votes difference (58%!) from its competitor: lovely olinguito B. neblina, also described in Zookeys but back in 2013.
In the second round of the quarter-final, the tapir ‘chocolate’ frog S. danta (described in Evolutionary Systematics this year) claimed the victory with a significant advantage (69%) over its competitor crab H. severus described in Zookeys in 2017.
The third battle in Round 2 secured a place at the semi-finals for the only plant to get this far in the New Species Showdown. If you are dedicated to the mission of proving the plant kingdom superior: keep supporting Nepenthes pudica in the semi-finals and beyond!
In the meantime, read the full description of the species, published in our PhytoKeys in June.
The last quarter-final send the Angolan ‘horned’ tarantula to the next round. Described in African Invertebrates in 2019, its discovery would have likely remained a secret had it not been for the local tribes who provided the research team with crucial information about the curious arachnid.
Round 3 – Semi-finals
Curiously enough, by winning against the ‘supergiant’ isopod B. raksasa – also known around the Internet as the ‘Darth Vader of the seas’ – the Amazonian anuran S. danta outcompetes the last species in the New Species Showdown representing our flagship taxonomy journal: ZooKeys.

The charming anuran was described in February 2022 in Evolutionary Systematics, a journal dedicated to whole-organism biology that we publish on behalf of the Leibniz Institute for the Analysis of Biodiversity Change (LIB).
In a dramatic turn of events, the tight match between the Angolan tarantula C. attonitifer , whose ‘horn’ protruding from its back surprised the scientists because of its unique structure and soft texture, and the first pitcher plant whose ‘traps’ can be found underground in Borneo, ended up with the news that the New Species Showdown will be concluding with a battle between the kingdoms Animalia and Plantae! What a denouement!

The record-breaking plant was described in June 2022 in PhytoKeys: a journal launched by Pensoft in 2010 with the mission to introduce fast, linked and open publishing to plant taxonomy.
THE FINAL
And here we were at the finish line.
But why did we hold the tournament right now?

If you have gone to the Pensoft website at any point in 2022, visited our booth at a conference, or received a newsletter from any of our journals, by this time, you must be well aware that in 2022 – more precisely, on 25 December – we turned 30. And we weren’t afraid to show it!

Pensoft’s team happy to showcase the 30-year story of the company at various events this year.
Left: Maria Kolesnikova at the annual Biodiversity Information Standards (TDWG 2022) conference, hosted by Pensoft in Sofia, Bulgaria. Right: Iva Boyadzhieva at the XXVI International Congress of Entomology (ICE 2022) in Helsinki, Finland.

Indeed, 30 is not that big of a number, as many of us adult humans can confirm. Yet, we take pride in reminiscing about what we’ve done over the last three decades. 

The truth is, 30 years ago, we wouldn’t have been able to picture this day, let alone think that we’d be sharing it with all of you: our journal readers, authors, editors and reviewers, collaborators in innovation, project partners, and advisors. 

Long story short, we wanted to do something special and fun to wrap up our anniversary year. While we have been active in various areas, including development of publishing technology concerning open and FAIR access and linkage for research outcomes and underlying data; and multiple EU-supported scientific projects, we have always been associated with our biodiversity journal portfolio.

Besides, who doesn’t like to learn about the latest curious creature that has evaded scientific discovery throughout human history up until our days? 😉

Now, follow the #NewSpeciesShowdown to join the contest!

Pensoft’s ARPHA Publishing Platform integrates with OA Switchboard to streamline reporting to funders of open research

By the time authors open their inboxes to the message their work is online, a similar notification will have also reached their research funder.

Image credit: OA Switchboard.

By the time authors – who have acknowledged third-party financial support in their research papers submitted to a journal using the Pensoft-developed publishing platform: ARPHA – open their inboxes to the congratulatory message that their work has just been published and made available to the wide world, a similar notification will have also reached their research funder.

This automated workflow is already in effect at all journals (co-)published by Pensoft and those published under their own imprint on the ARPHA Platform, as a result of the new partnership with the OA Switchboard: a community-driven initiative with the mission to serve as a central information exchange hub between stakeholders about open access publications, while making things simpler for everyone involved.

All the submitting author needs to do to ensure that their research funder receives a notification about the publication is to select the supporting agency or the scientific project (e.g. a project supported by Horizon Europe) in the manuscript submission form, using a handy drop-down menu. In either case, the message will be sent to the funding body as soon as the paper is published in the respective journal.

“At Pensoft, we are delighted to announce our integration with the OA Switchboard, as this workflow is yet another excellent practice in scholarly publishing that supports transparency in research. Needless to say, funding and financing are cornerstones in scientific work and scholarship, so it is equally important to ensure funding bodies are provided with full, prompt and convenient reports about their own input.”

comments Prof Lyubomir Penev, CEO and founder of Pensoft and ARPHA.

 

“Research funders are one of the three key stakeholder groups in OA Switchboard and are represented in our founding partners. They seek support in demonstrating the extent and impact of their research funding and delivering on their commitment to OA. It is great to see Pensoft has started their integration with OA Switchboard with a focus on this specific group, fulfilling an important need,”

adds Yvonne Campfens, Executive Director of the OA Switchboard.

***

About the OA Switchboard:

A global not-for-profit and independent intermediary established in 2020, the OA Switchboard provides a central hub for research funders, institutions and publishers to exchange OA-related publication-level information. Connecting parties and systems, and streamlining communication and the neutral exchange of metadata, the OA Switchboard provides direct, indirect and community benefits: simplicity and transparency, collaboration and interoperability, and efficiency and cost-effectiveness.

About Pensoft:

Pensoft is an independent academic publishing company, well known worldwide for its novel cutting-edge publishing tools, workflows and methods for text and data publishing of journals, books and conference materials.

All journals (co-)published by Pensoft are hosted on Pensoft’s full-featured ARPHA Publishing Platform and published in a way that ensures their content is as FAIR as possible, meaning that it is effortlessly readable, discoverable, harvestable, citable and reusable by both humans and machines.

***

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Follow OA Switchboard on Twitter and Linkedin.

Swimmer’s Itch: what causes this neglected snail-borne disease?

A new study suggests that a cercarial dermatitis outbreak in South Thailand was caused by the blood fluke Schistosoma indicum.

Cercarial dermatitis, also known as swimmer’s itch or clam-digger’s itch, is caused by the larvae of blood flukes that are parasites of birds or mammals. When these larvae, called cercariae, penetrate human skin, they trigger an allergic reaction within 10-15 hours that takes about a week to heal. Unable to mature into adults, the larvae then die on the skin. The gravity of an outbreak depends on how humans and birds or mammals come in contract with the aquatic environment, but people engaged in water activities, such as farmers, fishermen, and agricultural workers, are most likely to be affected.

Cercarial dermatitis cases from Chana district, October 2020

Between August and October 2020, a cercarial dermatitis outbreak with 359 confirmed cases occurred in Chana district, Songkhla Province, South Thailand. It mostly affected rice farmers from the area, who were busy with cultivation during the rainy season. Following a short investigation, three cases of patients were confirmed to be cercarial infections by skin biopsy (Bureau of Epidemiology, Department of Disease Control, Ministry of Public Health, Thailand).

“The study of intermediate host and definitive host in the outbreak area are important for the control program of snail-borne disease,” the researchers argue in their research paper, which was published in the open-access scientific journal Evolutionary Systematics.

Having studied six snail species from the area, they found out that two were infected, each with three different species of flatworms. The cercarial dermatitis outbreak was due to ruminant parasites, such as the blood fluke Schistosoma indicum, which often uses domestic animals as its host.

Collected snails from five locations of cercarial dermatitis outbreak area. a. Filopaludina s. peninsularis b. Filopaludina s. polygramma c. Indoplanorbis exustus d. Filopaludina m. cambodjensis e. Bithynia s. siamensis f. Pomacea canaliculata (Scale bar: 1 cm).

“Ruminant-infecting trematodes, namely, S. indicum and S. spindale, cause a hepato-intestinal schistosomiasis resulting in reduced milk yield,” the authors explain. “This occurrence of S. indicum and S. spindale implies the spread of cattle blood fluke cercariae in aquatic environments.”

“Additionally, these species of the S. indicum group primarily cause cercarial dermatitis in humans, which has become an important public health issue for people living in endemic regions.”

“In South India and Southeast Asia, where S. indicum and S. spindale have been reported to be widespread, they caused major pathology and mortality to livestock, leading to welfare and socio-economic issues, predominantly among poor subsistence farmers and their families.”

Image of Schistosoma indicum Montgomery, 1906 (Syn. S. nasalis Rao, 1933) a. Head organ of cercaria stained with 0.5% neutral red (DIC microscopy) b. Body part of cercaria stained with 0.5% neutral red (DIC microscopy) c. Image of unstained cercaria (DIC microscopy) d. Images of cercaria stained with 0.5% neutral red (DIC microscopy) e. Drawing of cercaria structure f. Images of sporocyst stained with 0.5% neutral red (light microscopy) Abbreviations: c: cercaria, eb: excretory bladder, ep: esophagus, fu: furca, h: head organ, i: intestine, pg: penetration gland, sp: sporocyst, ta: tail, vs: ventral sucker.. (Scale bars: 100 μm).

Some of the other worm species they found parasitized the intestines of fish, mammals, or birds, while others caused anemia and even death in ruminant animals.

“The results of this study will provide insights into the parasite species that cause cercarial dermatitis and may improve our understanding of public health problems in the outbreak and agricultural vicinity areas,” the authors of the study say. “In addition, the sequence data generated here are the first S. indicum DNA sequences from Thailand, which will be useful for further genetic study of the other blood flukes in this region.”

Research article:

Krailas D, Namchote S, Komsuwan J, Wongpim T, Apiraksena K, Glaubrecht M, Sonthiporn P, Sansawang C, Suwanrit S (2022) Cercarial dermatitis outbreak caused by ruminant parasite with intermediate snail host: schistosome in Chana, South Thailand. Evolutionary Systematics 6(2): 151-173. https://doi.org/10.3897/evolsyst.6.87670

Images by Professor Dr. Duangduen Krailas.

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Celebrating World Lizard day with amazing discoveries

This August 14, we’re looking back to the most impressive lizard discoveries we’ve witnessed throughout the years.

World Lizard Day is a great way to raise awareness of these curious reptiles and their conservation needs; it is also a good excuse to look at pretty lizard pictures! Today, we’re doing a bit of both.

At Pensoft, we’ve published many new lizard species, some of them rare and truly fascinating. This August 14, we’re looking back to the most impressive lizard discoveries we’ve witnessed throughout the years.

The Dracula lizard

This beautiful lizard, described in 2018, comes from the Andean slopes of southwestern Colombia and northwestern Ecuador. It inhabits evergreen low montane forests, and is only known from a relatively small territory of approximately 1582 km2. Its prey most often consists of insects, spiders and worms.

Contrary to what you might think, this species was not named after the eponymous vampire count, but rather after some beautiful tropical flowers.

The specific epithet dracula refers to the Dracula Reserve, which is located within the lizard’s distribution and near its type locality. The Reserve protects an area with a high diversity of orchids of the genus Dracula.

Published in ZooKeys.

The tiny chameleon

This lizard friend, known as Brookesia tedi, is less than 3 cm long! It is more than ten times smaller than the longest known chameleon, Furcifer oustaleti. Its size makes it difficult to find, and as a result, challenging to study. Its description, published in 2019, helped resolve a 50-year old identity question.

Living at 1300 m above sea level on the Marojejy massif in northeastern Madagascar, Brookesia tedi lives is brown in colour, its tail and the back of its head grey.

The researchers consider it Vulnerable but worry that improper protection on Marojejy, as well as fires, could rapidly drive the species to becoming Critically Endangered.

Published in Zoosystematics and Evolution.

The charismatic wood lizard

Enyalioides feiruzae is a colourful and highly variable lizard – especially its males, who can have brownish turquoise, gray, or greenish brown backs traced with pale lines. Females, in turn, can be greenish brown or floury brown, with faint dark brown lines on their back, limbs and tail, and spots on the sides. The team behind its discovery spent seven years in the area searching for amphibians and reptiles before describing it.

The species comes from the Tropical Andes, and more specifically – from the Huallaga River basin, an area which is still poorly studied because for a long time it was disturbed by civil wars.

The Feiruz wood lizard was named after another reptile, Feiruz the iguana – “muse and lifelong friend”.

The spotted monitor lizard

Mussau is a small island in northeastern Papua New Guinea. The top predator on it? A lizard.

Varanus semotus has been isolated from related species for an estimated one to two million years, with its closest relatives several hundred kilometers away.

Even so, science discovered it only recently.

The one-meter-long lizard has a black body with yellow and orange markings and a pale yellow tongue, with a turquoise to blue tail. These animals “will eat just about anything they can catch and kill,” study author Valter Weijola told the Washington Post.

As the only large terrestrial generalist predator and scavenger on the island, Varanus semotus may fill an important ecological function, making it of particular conservation concern.

Published in ZooKeys.

The black iguana

What makes Iguana melanoderma so distinct is its black color; in fact, it only gets blacker with age. The species was discovered in Saba and Montserrat islands, the Lesser Antilles (Eastern Caribbean), to which it is endemic.

However, it is threatened by unsustainable harvesting (including pet trade), and competition and hybridization from invasive alien iguanas from South and Central America.

A greater focus on biosecurity, the minimization of hunting, and habitat conservation, would help its conservation, the researchers write in their paper.

In Saba, Iguana melanoderma lives on cliffs, in trees and bushes, in shrublands, and deciduous woodlands. It lives in a foggy and cool environment up to about 500 m a.s.l. and sunbathes as soon as the sun rises.

Published in ZooKeys.

Bonus: Illegal lizard trade might be closer than you think

Dubbed “miniature Godzilla” and “the Holy Grail of Herpetology,” the earless monitor lizard is endemic to Borneo. Legally, it can neither be traded within Indonesia, Malaysia and Brunei, nor exported out of them.

Even so, reptile enthusiasts and unscrupulous traders have long been smuggling small numbers of earless monitor lizards, eventually bringing them to Europe.

A new study reported that accredited zoos have acquired individuals of the protected lizard, without any evidence of legal export.

“Zoos that continue to obtain animals that have been illegally acquired, directly or indirectly, are often fuelling the illegal wildlife trade, supporting organised crime networks and possibly contributing to the decline in some species,” Vincent Nijman, author of the study, told us.

Published in Nature Conservation.