Scientists call for a global alliance to place biodiversity at the heart of the UN Pact for the Future

A new white paper delivers a clear message: protecting biodiversity is not just an environmental issue. It is essential for food security, public health, climate stability, and the global economy.

A new white paper: “From Knowledge to Solutions: Science, Technology and Innovation in Support of the UN SDGs”, published in the open-science scholarly journal Research Ideas and Outcomes (RIO), brings together leading voices from Europe’s biodiversity and data science communities to deliver a clear message: protecting biodiversity is not just an environmental issue. It is essential for food security, public health, climate stability, and the global economy. 

The authors make a call for a decisive shift: from fragmented initiatives to a holistic, global approach to biodiversity research and policy, already demonstrated during a workshop at the 79th United Nations General Assembly and the Science Summit (UNGA79). A key part of this transformation concerns the role of research infrastructures in connecting science, technology, and policy: from vast biodiversity collections and genomic observatories, to ecosystem “digital twins” powered by supercomputers.

Behind the paper are a network of legal entities based in Europe and holding global interests, which includes biodiversity, ecology, and engineering communities, coordinated by the LifeWatch European Research Infrastructure Consortium (ERIC). 

With their combined expertise and through European initiatives, such as Research Infrastructures, e-Infrastructures, the European Open Science Cloud (EOSC), the Digital Twin projects and academic publishers, these communities provide a basis for collaboration in strategically contributing to the implementation of the Kunming-Montreal Global Biodiversity Framework (K-M GBF) targets.

Biodiversity needs to be placed at the centre of the upcoming 2026 UN Summit of the Future and become a core pillar of the agenda after the 2030 deadline for the United Nations Sustainable Development Goals (UN SDGs).

The UN Pact for the Future should include biodiversity as a core pillar: “not only of environmental sustainability, but of equity, security, and intergenerational justice”.  

urges the team.

To do this, the authors propose the establishment of a global alliance that will strategically integrate biodiversity conservation into the core priorities of the UN Summit of the Future and the post-SDG agenda.

This alliance is meant to join the voices of researchers, policymakers, indigenous knowledge holders, civil society, and industry to ensure that biodiversity underpins peace, prosperity, and justice as a universal enabler.

The white paper also demonstrates how the research infrastructures collectively contribute to the seven Strategic Considerations of the K-M GBF, outlined here in brief and further detailed in the full publication:

  1. Contribution and rights of Indigenous Peoples and local communities: Ensuring fair recognition and sharing of benefits with indigenous peoples and local communities, thus integrating their knowledge into biodiversity science.
  2. Collective efforts towards the targets of the K-M GBF: Coordinating biodiversity monitoring, databases, and digital infrastructures to track progress towards global conservation targets.
  3. Fulfilment of the three principal objectives of the Convention on Biological Diversity (CBD) and its protocols: Studying or supporting the study of all aspects of biodiversity; and providing public and streamlined access to biodiversity information.
  4. Implementation through science, technology, and innovation: Developing and offering technologically advanced and novel solutions for research, data sharing and management to various users; and promoting open science by publishing research findings and increasingly sharing more facets of the research process.
  5. Ecosystem approach: Developing and implementing technologies that enable a cross-domain, multidisciplinary approach to studying biodiversity and ecosystems; and using holistic, cross-disciplinary methods to understand and predict biodiversity and environmental dynamics.
  6. Cooperation synergies: Collaborating with organisations responsible for implementing the CBD, policy agents, international research projects; and participating in international forums and social, scientific and technical initiatives.
  7. Biodiversity and health linkages: Demonstrating how healthy ecosystems support human health, food security, and resilience to pandemics by supporting interdisciplinary research through bringing together knowledge and data and uncovering links and interactions between humans and the environment.

“With the UN’s ‘Pact for the Future’ currently being shaped, we see a unique opportunity to anchor biodiversity as a unifying thread across global goals that will transform how societies respond to the intertwined crises of climate change, nature loss, and pollution,” say the authors.

The white paper is the latest contribution to the LifeWatch ERIC Strategic Working Plan Outcomes open-science collection meant to provide a one-stop access point to the most important deliverables by the European biodiversity and ecosystem research infrastructure, which is currently undergoing a significant upgrade as a response to the needs of its target communities and stakeholders.

***

Original source:

Arvanitidis C, Barov B, Gonzalez Ferreiro M, Zuquim G, Kirrane D, Huertas Olivares C, Drago F, Pade N, Basset A, Deneudt K, Koureas D, Manola N, Mietchen D, Casino A, Penev L, Ioannidis Y (2025) From Knowledge to Solutions: Science, Technology and Innovation in Support of the UN SDGs. Research Ideas and Outcomes 11: e168765. https://doi.org/10.3897/rio.11.e168765

This publication is part of a collection:

LifeWatch ERIC Strategic Working Plan Outcomes Edited by Christos Arvanitidis, Cristina Huertas, Alberto Basset, Peter van Tienderen, Cristina Di Muri, Vasilis Gerovasileiou, Ana Mellado

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About the contributing organisations:

LifeWatch ERIC 

Europe’s biodiversity and ecosystem research infrastructure. LifeWatch ERIC provides access to biodiversity and ecosystem data, services and other research products: its virtual workbenches and digital twins for biodiversity science enable researchers worldwide to analyse biodiversity patterns, processes, and changes in ecosystems, and derive evidence-based knowledge for science and policy. 

CSC – IT Center for Science

CSC hosts one of the world’s most powerful supercomputers (LUMI), pioneering biodiversity digital twins and climate models. CSC provides critical support for data-intensive projects that link computing, AI, and environmental science.

EGI Federation 

A federation of hundreds of data centres providing global-scale computing, AI, and data services. EGI enables large-scale analysis of biodiversity and environmental data from sensors and satellites, supporting international collaboration.

VLIZ – Flanders Marine Institute

A hub for marine research, coordinating Europe’s Digital Twin of the Ocean and global biodiversity data systems, such as WoRMS (World Register of Marine Species). VLIZ drives blue innovation and ocean data integration.

The European Marine Biological Resource Centre (EMBRC-ERIC)

Europe’s infrastructure for marine biology, offering access to organisms, labs, and genomic observatories. EMBRC connects over 70 institutes across 10 countries, supporting research “from genes to ecosystems.”

The Distributed System of Scientific Collections (DiSSCo)

The largest initiative to digitise and unify Europe’s natural science collections into a single, FAIR-data-based infrastructure. DiSSCo makes museum collections globally accessible, boosting taxonomic, ecological, and environmental research.

OpenAIRE 

A European e-Infrastructure dedicated to building a globally connected, interoperable, and sustainable open research ecosystem, with Open Science at its core. By offering a suite of services covering the entire research lifecycle, guidelines, and practices that support the adoption of Open Access and FAIR data principles across its network of National Open Access Desks in 34 countries, OpenAIRE supports local researchers, funders, and policymakers in aligning with European and global open science policies.

Pensoft 

Founded in 1992 “by scientists, for scientists”, the academic open-access publishing company is well known worldwide for its novel cutting-edge publishing tools, workflows and methods for text and data publishing of journals, books and conference materials. Through its Research and Technical Development department, the company is involved in various research and technology projects. Pensoft coordinated the EU project BiCIKL (2021-2024), which established a new community of Research Infrastructures and users of FAIR and interlinked biodiversity data.

The Association for Computing Machinery (ACM)

The world’s largest computing society, established to foster ethical and responsible innovation. ACM brings global expertise in computing and AI to biodiversity research and policy.

Athena Research Centre

A leading ICT and AI research institute advancing digital infrastructures and open science platforms. Athena connects computing innovation with biodiversity, humanities, and societal challenges.

Pensoft to co-host a session on knowledge transfer & continuity at Living Data 2025

Pensoft is a co-organiser of a four-hour session, titled: “Long Live Biodiversity Data: Knowledge Transfer and Continuity across Research Projects”. 

In October 2025, four major institutions in the biodiversity research landscape: TDWG, GBIF, OBIS and GEO BON, will come together as the organisers of the Living Data 2025 conference. 

The event is set to be among one of the most crucial international gatherings of the year for experts and stakeholders in the field of biodiversity data. Set to take place in the Colombian capital of Bogotá between 21st and 24th, Living Data 2025 will centre around four core themes:

  • Open data
  • Data integration
  • Biodiversity data application
  • Community engagement and capacity-building

As an academic publisher with experience and commitment to all these thematic areas, Pensoft will participate in the event in the capacity of an exhibitor and an award sponsor, as well as a symposium host. 

The conference delegates will have the chance to learn more about the publisher, its exclusively open-access scholarly portfolio and participation at various international scientific projects when they visit the company’s branded stand. 

During the event, the scientific publisher and technology provider will also present the Pensoft Award for the Best Student Oral Presentation, which grants the winner a free publication in an open-access, peer-reviewed journal from our portfolio

Crucially, Pensoft’s involvement in the Living Data 2025 programme also includes a dedicated four-hour session titledLong Live Biodiversity Data: Knowledge Transfer and Continuity across Research Projects”. 

The symposium will be jointly co-organised by Pensoft, LifeWatch ERIC and the Naturalis Biodiversity Centre. As the title suggests, the session will focus on the longevity of scientific outputs as they are generated, shared and re-used across disciplines, organisations and initiatives. In this context, tools, information hubs and workflows enabling exchanges that truly consolidate the global biodiversity data space over time will be showcased.

In a broader sense, the session will also seek to demonstrate how targeted communication can help transform science results into actionable knowledge by raising awareness among agenda-setters. This will speak to the potential of a multi-level approach to information sharing to bridge the gap between science and policy in relation to increasingly ambitious global environmental objectives.

Multiple projects affiliated with Pensoft will be represented in these deliberations, in order to share a diverse array of relevant insights:

The symposium will be divided into two sessions:

  • 22 October (Wednesday): 10:45 AM – 12:45 PM (UTC/GMT-5)
  • 23 October (Thursday): 10:45 AM to 12:45 PM (UTC/GMT-5)

You can find out more about Living Data, including the details on registering for an in-person or virtual attendance, on the conference’s website. Our session is listed on this page under ID number 6788879.

As an additional note, the organisers of the conference have launched a call for extended abstracts for all speakers at Living Data 2025 that will remain open until 1st October 2025. The participants who opt to publish their conference abstracts in the Biodiversity Information Science and Standards (BISS) journal will enjoy permanent and far-reaching accessibility and discoverability for their conference contributions.

The TDWG network, who launched BISS as their official scholarly outlet in 2017 in collaboration with long-time partner Pensoft, have posted a list of the advantages for submitting an extended abstract, even though they have already had their abstracts accepted by the Living Data 2025 organisers. Amongst the reaslons are many perks typically associated with a conventional research article, such as DOI registration, indexation at dozens of scientific databases, embedded media, tables and supplementary materials, and usage metrics.

Bulgaria joins the Global Biodiversity Information Facility (GBIF) 

Led by Pensoft and its CEO Prof. Lyubomir Penev, the partnership marks a major step for Bulgarian science and regional biodiversity leadership.

Bulgaria officially joins the Global Biodiversity Information Facility (GBIF). This major event for Bulgarian science was initiated by a memorandum signed by the Minister of Environment and Water: Manol Genov. 

Logo for the Global Biodiversity Information Facility (GBIF) featuring stylized green leaves and the acronym "GBIF" in bold text.

GBIF is an international network and data infrastructure funded by governments around the world that provides international open access to a modern and comprehensive database of all species of living organisms on the planet. 

Joining GBIF is an important step for initiatives such as the Bulgarian Barcode of Life (BgBOL), as it will facilitate the integration of genetic data on species diversity into the global scientific community and support the creation of a more accurate and accessible bioinformatic database. This will increase the scientific visibility and relevance of Bulgarian efforts in molecular taxonomy and conservation.

World map showing GBIF network participants: green for voting participants, blue for associate participants, gray for non-participants.
Prof. Lyubomir Penev

“First of all, I’d like to congratulate all fellow scientists working in the domain of biology and ecology in Bulgaria with this wonderful achievement,” says Prof. Dr. Lyubomir Penev, founder and CEO of the scientific publisher and technology provider Pensoft, as well as a key participant in the talks and preparations for Bulgaria’s joining GBIF. He is also Chair of BgBOL.

“Becoming a full member of GBIF has been a long-anticipated milestone we have discussed and worked on for several years. Coming not long after we initiated the Bulgarian Barcode of Life, the Bulgarian membership in GBIF gives us yet another uncontested evidence that the nation is on the right path to preserving our uniquely rich fauna and flora,” he adds.

Pensoft is looking forward to sharing our know-how with Bulgarian institutions and scientists in order to streamline the visibility and overall efficiency of biodiversity data collected from Bulgaria.

Prof. Lyubomir Penev

“As close partners of GBIF for over 15 years now, Pensoft is looking forward to sharing our know-how with Bulgarian institutions and scientists, so that they can fully utilise the GBIF infrastructure and tools, in order to streamline the visibility and overall efficiency of biodiversity data collected from Bulgaria.”

GBIF is managed by a Secretariat based in Copenhagen and brings together countries and organisations that collaborate through national and institutional coordinators (also called participant nodes). The mechanism provides common standards, good practices and open access tools for institutions around the world to share information on the location and recording of species and specimens. According to GBIF, a total of 107 countries and organisations currently participate in the network, a significant number of which are European.

The GBIF network, as screenshot from https://www.gbif.org/the-gbif-network on 10/06/2025.

By joining GBIF, biodiversity data generated in Bulgaria can be streamlined through the network’s infrastructure so that the country does not need to build and maintain its own separate infrastructure, which also saves significant financial resources.

As a full voting member, Bulgaria will ensure that biodiversity data in the country will be shared and accessible through the platform, and will contribute to global knowledge on biodiversity, respectively to the solutions that will promote its conservation and sustainable use.

Map of Bulgaria showing biodiversity data with orange heatmap indicating occurrences.
Bulgaria’s page on GBIF, as screenshot from https://www.gbif.org/country/BG/summary on 10/06/2025.

Improvements in data management by Bulgaria will also contribute to better reporting and fulfilment of obligations to the Convention on Biological Diversity (CBD) as well as to the Intergovernmental Platform on Biodiversity and Ecosystem Services (IPBES). As a member of GBIF, Bulgaria will be able to apply for funding for flagship activities in Bulgarian institutions and neighbouring Balkan countries. This will enable the country to expand its leadership role in the Balkans in biodiversity research and data accumulation.

The partnership between GBIF and Pensoft dates back to 2009 when the global network and the publisher signed their first Memorandum of Understanding intended to solidify their cooperation as leaders in the technological advancement relevant to biodiversity knowledge. Over the next few years, Pensoft integrated its whole biodiversity journal portfolio with the GBIF infrastructure to enable multiple automated workflows, including export of all species occurrence data published in scientific articles straight to the GBIF platform. Most recently, over 20 biodiversity journals powered by Pensoft’s scholarly publishing platform ARPHA launched their own hosted portals on GBIF to make it easier to access and use biodiversity data associated with published research, aligning with principles of Findable, Accessible, Interoperable, and Reusable (FAIR) data.

Journals published on ARPHA now archived in the Biodiversity Heritage Library

To date, the content available on BHL includes 16,000 legacy articles and also extends to future articles.

Content from more than 30 biodiversity journals published on the ARPHA Platform will now be archived in the Biodiversity Heritage Library (BHL), the world’s largest open-access digital library for biodiversity literature and archives.

A vibrant orange butterfly perched on yellow flowers, with text announcing journal archiving in the Biodiversity Heritage Library.

A global consortium of natural history, botanical, research, and national libraries, BHL digitises and freely shares essential biodiversity materials. A critical resource for researchers, it provides vital access to material that might otherwise be difficult to obtain.

Under the agreement, over 16,000 articles published on Pensoft’s self-developed ARPHA Platform are now available on BHL. Both legacy content and new articles are made available on the platform, complete with full-text PDFs and all relevant metadata.

Thanks to this integration, content in our journals will become even more accessible and readily discoverable, helping researchers find the biodiversity information they need.

Prof. Lyubomir Penev

More content published on ARPHA will gradually be added to the BHL archive.

The publications will be included in the Library’s full-text search, allowing researchers to easily locate relevant biodiversity literature. Crucially, the scientific names within the articles will be indexed using the Global Names Architecture, enabling seamless discovery of information about specific taxa across the BHL collection.

This automated workflow is facilitated by the ARPHA platform and uses the Open Archives Initiative Protocol for Metadata Harvesting (OAI-PMH) to enable exposure and harvesting of repository metadata. 

“Pensoft is pleased to collaborate with BHL in our joint mission to support global biodiversity research through free access to knowledge. Thanks to this integration, content in our journals will become even more accessible and readily discoverable, helping researchers find the biodiversity information they need,” said Prof. Lyubomir Penev, CEO and founder of Pensoft and ARPHA.

The news comes soon after BHL announced it is about to face a major shift in its operation. From 2026, the Smithsonian Institution – one of BHL’s 10 founding members – will cease to host the administrative and technical components of BHL. As the consortium explores a range of options, the BHL team is confident that “the transition opens the door to a reimagined and more sustainable future for BHL.”

Biodiversity Knowledge Hub makes an appearance at the European Geosciences Union General Assembly 2025

The Biodiversity Knowledge Hub fosters interoperability between diverse resources to make it easier to use and combine information.

Gabriel Peoluze (LifeWatch ERIC) presents the Biodiversity Knowledge Hub poster at EGU 2025
(Vienna, Austria).

On Monday, 28 April, the first day of the European Geosciences Union General Assembly 2025 (EGU 2025), participants had the chance to discover one of the most promising initiatives in biodiversity informatics: the Biodiversity Knowledge Hub (BKH). BKH was presented as part of a dedicated poster session, titled “Biodiversity Knowledge Hub: Addressing the impacts of environmental change by linking Research Infrastructures, Global Aggregators and Community Networks“.

Understanding and addressing the impacts of environmental change on biodiversity and ecosystems demands access to reliable FAIR data (as in Findable, Accessible, Interoperable, Reusable). However, the current landscape is often fragmented, making it difficult to combine and use these resources effectively.

Enter the Horizon-funded project Biodiversity Community Integrated Knowledge Library (BiCIKL): a pioneering initiative that demonstrates the transformative power of interdisciplinary collaboration. Coordinated by Pensoft, BiCIKL ran between 2021 and 2024.

The Vision of BiCIKL

Within BiCIKL, 14 European institutions from ten countries teamed up with the aim to integrate biodiversity data across research infrastructures, scientific repositories, and expert communities.

Through this integration, BiCIKL bridged the gap between isolated knowledge systems and delivered actionable insights to guide conservation and resilience efforts. The project embodies the principles of open science by demonstrating how interdisciplinary collaboration can turn fragmented data into cohesive, usable knowledge for researchers, policymakers, and practitioners.

The Biodiversity Knowledge Hub

At the heart of BiCIKL’s success is the Biodiversity Knowledge Hub (BKH): an innovative platform that provides seamless access to biodiversity data, tools, and workflows. The BKH fosters interoperability between diverse resources, thus making it easier to combine information from different sources. Whether for advanced research analytics or policymaking in support of sustainable development, the BKH empowers users with tools tailored to their needs.

A few of the standout features of the BKH include:
  • Modular design to allow continuous expansion and adaptability to new challenges in biodiversity and climate resilience
  • Interoperable systems that connect a variety of databases, repositories, and services to deliver integrated knowledge.
  • Community building by welcoming a broad network of stakeholders to ensure the platform’s long-term sustainability and growth.
Watch the Biodiversity Knowledge Hub video on YouTube.
Setting a New Benchmark in Biodiversity Informatics

Through its collaborative approach, BiCIKL set a new standard for how biodiversity and climate resilience initiatives can be harmonised globally. By showcasing best practices in data integration, capacity building, and stakeholder engagement, BiCIKL became much more than a project: it turned into a blueprint for future biodiversity knowledge infrastructures.

The Biodiversity Knowledge Hub serves to demonstrate how harmonised standards and active collaboration are key to unlocking the full potential of biodiversity data. In doing so, its mission is to create scalable, long-term solutions that are crucial for addressing today’s pressing environmental challenges.

The poster presentation at EGU25 outlined the methodologies and technologies driving the BKH, emphasizing its role as a pioneering model for integrated biodiversity knowledge and action. As environmental pressures continue to mount, the work of BiCIKL and the Biodiversity Knowledge Hub offers a hopeful path forward—one where knowledge flows freely, collaborations flourish, and data-driven solutions guide our way to a more resilient future.

Visit the Biodiversity Community Integrated Knowledge Library (BiCIKL) project’s website at: https://bicikl-project.eu/.

Don’t forget to also explore the Biodiversity Knowledge Hub (BKH) for yourself at: https://biodiversityknowledgehub.eu/ and watch the BKH’s introduction video

Revisit highlights from the BiCIKL project on X/Twitter from the project’s hashtag: #BiCIKL_H2020 and handle: @BiCIKL_H2020.

More than 20 journals published by Pensoft with their own hosted data portals on GBIF to streamline and FAIR-ify biodiversity research

The portals currently host data on over 1,000 datasets and almost 325,000 occurrence records across the 25 journals.

In collaboration with the Global Biodiversity Information Facility (GBIF), Pensoft has established hosted data portals for 25 open-access peer-reviewed journals published on the ARPHA Platform.

A screenshot featuring a close-up of a turtle on a forest floor, overlayed with a web portal design for biodiversity data browsing.
A screenshot of the Check List data portal.

The initiative aims to make it easier to access and use biodiversity data associated with published research, aligning with principles of Findable, Accessible, Interoperable, and Reusable (FAIR) data.

The data portals offer seamless integration of published articles and associated data elements with GBIF-mediated records. Now, researchers, educators, and conservation practitioners can discover and use the extensive species occurrence and other data associated with the papers published in each journal.

A video displaying an interactive map with occurrence data on the BDJ portal.

The collaboration between Pensoft and GBIF was recently piloted with the Biodiversity Data Journal (BDJ). Today, the BDJ hosted portal provides seamless access and exploration for nearly 300,000 occurrences of biological organisms from all over the world that have been extracted from the journal’s all-time publications. In addition, the portal provides direct access to more than 800 datasets published alongside papers in BDJ, as well as to almost 1,000 citations of the journal articles associated with those publications.  

“The release of the BDJ portal and subsequent ones planned for other Pensoft journals should inspire other publishers to follow suit in advancing a more interconnected, open and accessible ecosystem for biodiversity research,” said Dr. Vince Smith, Editor-in-Chief of BDJ and head of digital, data and informatics at the Natural History Museum, London.

“The programme will provide a scalable solution for more than thirty of the journals we publish thanks to our partnership with Plazi, and will foster greater connectivity between scientific research and the evidence that supports it,” said Prof. Lyubomir Penev, founder and chief executive officer of Pensoft.

On the new portals, users can search data, refining their queries based on various criteria such as taxonomic classification, and conservation status. They also have access to statistical information about the hosted data.

Together, the hosted portals provide data on almost 325,000 occurrence records, as well as over 1,000 datasets published across the journals.

Plants of the Carribbean: Pensoft at the XIII Latin American Congress of Botany in Havana

Researchers gathered in Cuba to share the latest advancements in plant science.

From the 10th to 14th March, 2025, Havana, Cuba, hosted the XIII Latin American Congress of Botany, a fantastic event that brought together botanists and mycologists from far and wide to share knowledge and celebrate the rich botanical heritage of Latin America. 

Organised by the Latin American Botanical Association and Planta! – Plantlife Conservation Society, the event welcomed around 300 attendees and provided fertile ground for experts to engage in meaningful discussions and forge new partnerships. 

Pensoft's stand at the XIII Latin American Congress of Botany in Havana, with many visitors.
Pensoft’s stand welcomed hundreds of visitors.

Pensoft was proud to participate in the congress, showcasing its commitment to advancing plant research and establishing relationships with the global academic community. As always, the Pensoft team was thrilled to meet up with familiar authors, editors, and reviewers, as well as hundreds of new faces.

Pensoft’s stand was hub of activity, featuring information on its numerous journals in botany and mycology. These included PhytoKeys, MycoKeys, IMA Fungus, Plant Ecology and Evolution, Italian Botanist, Biodiversity Data Journal, Neotropical Biology and Conservation, and Check List. At the stand, attendees were welcomed to explore the journals, discuss publishing opportunities, learn about Pensoft’s cutting-edge publishing and technology solutions, take some stickers, and even enter a raffle!

The stand was adorned with many promotional materials featuring artwork by Denitsa Peneva, which proved to be a major draw for the attendees. 

On Friday, March 14, 2025, Pensoft’s CEO and Founder, Prof Dr Lyubomir Penev, delivered a compelling talk titled “Advancing Plant Taxonomy and Conservation through Scholarly Communication.” This presentation delved into the workflows and tools designed to streamline data publishing and enhance scholarly communication throughout the academic portfolio of the open-access publisher. Key aspects covered included semantic enrichment, data publishing, automated data import/export and science communication, all of which are crucial for advancing biodiversity research and conservation efforts.

The event marked another milestone in Pensoft’s ongoing efforts to bridge the gap between research and publication, ensuring that botanical knowledge reaches a wider audience and contributes to the conservation of plant diversity worldwide. As the botanical community looks forward to future gatherings, Pensoft remains ready to support and enhance the dissemination of botanical science globally.

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Top 10 new species of 2024

A countdown of our top 10 favourite species described as new to science in our journals this year.

2024 is almost over—can you believe it?

If you follow any of Pensoft’s social media accounts, you will know that we have been counting down our top 10 favourite species described as new-to-science in our journals this year.

The list is—of course—entirely arbitrary, but it is also a fun way to look back on a year in which several weird and wonderful animals, plants and fungi were discovered.

In this blog post, we will tell you more about each species, share some honourable mentions, and reveal our number 1 spot!

Honourable mentions

The league of legends crab

When it was time to name a tiny, ‘furry’ new species of gorilla crab from China, researchers drew unlikely inspiration from the video game League of Legends.

Gothus teemo was named after the character Teemo thanks to its distinctive appearance and has drawn a lot of attention from fans of the franchise.

Published in Zoosystematics and Evolution.

the ancient shark

The new species is thought to have resembled a modern sandtiger shark (pictured).

Calling anything on this list a ‘new species’ is not accurate—rather, they are just new to published science. Nothing exemplifies this more than Palaeohypotodus bizzocoi, a long-extinct shark species that lived 65 million years ago, shortly after the fall of the dinosaurs.

What makes this discovery remarkable is that it was partially accidental. Find out how a 100-year-old box of teeth in Alabama led to the discovery of this ancient shark below.

Published in Fossil Record.

the drone-discovered plant

Sometimes, it is the way in which a new species is discovered that makes it so special.

Such is the case for Schiedea waiahuluensis, a carnation species from Hawaii that is likely the first plant to be identified and collected using drone technology. Learn all about it below!

Published in PhytoKeys.

Top 10 new species of 2024

10: the crocodile newt

Tylototriton gaowangjienensis.

With its all-black colouration, Tylototriton gaowangjienensis, a crocodile newt from China, has drawn comparisons to Toothless from How to Train Your Dragon.

However, this alluring amphibian hides flashes of orange beneath its tail and toes! Find more pictures and information below.

Published in Herpetozoa.

9: the border-hopping bee

New bee species.
Male Hoplitis onosmaevae with unfolded proboscis.

Besides its adorable appearance, Hoplitis onosmaevae is remarkable due to its distribution. It is currently only known from a small region of the French Alps, and areas >2,000 km away in the mountains of Turkey and Iraq.

Another interesting aspect of Hoplitis onosmaevae is its specialised ecological niche: it is thought to only collect pollen from Onosma species. This narrow ecological niche makes it vulnerable to factors like climate change and changes in agricultural practices.

Published in Alpine Entomology.

8: the dung fungus

Metacampanella coprophila

Metacampanella coprophila is one of two new species described in a recent MycoKeys paper! Known from Mongolia, it grows in sheep dung in the summer.

Metacampanella is an important, recently defined genus in the Marasmiaceae family, expected to expand with future studies.

Published in MycoKeys.

7: the miracle plant

John L. Clark with Amalophyllon miraculum. Credit @phinaea on Instagram.

The discovery of Amalophyllon miraculum—in an area assumed to be a barren agricultural landscape of plant extinctions—represents an inspiration for biodiversity conservation. This “miracle” plant, as its name suggests, was found surviving in one of the small, isolated forest fragments that remain in the Centinela region of western Ecuador.

Published in PhytoKeys.

6: the spiky frog

Pristimantis normaewingae.

This spiky amphibian was discovered on Cerro Candelaria, a mountain in the Tungurahua province. The discovery of this new species in the upper Rio Pastaza watershed suggests this area might be a centre of rapid evolution for these fascinating frogs.

Published in Evolutionary Systematics.

5: the giant tiny beetle

Clavicornaltica mataikanensis.

Entomologists and citizen scientists teamed up to discover this new species of flea beetle in the lush rainforests of Borneo. The discovery was made during a Taxon Expeditions trip, where non-scientist people got the chance to work alongside scientists to identify and describe new species.

What makes this discovery particularly exciting is the beetle’s size—it’s actually one of the largest among its relatives! Flea beetles that live in the leaf litter of tropical forests are typically much smaller, and as a result, we know very little about their ecology and diversity.

Published in Biodiversity Data Journal.

4: the grumpy dwarf goby

A photograph of a red grumpy-looking fish on a black background.
The grumpy dwarf goby, Sueviota aethon.

Discovered in the Red Sea, the ‘grumpy dwarf goby’ (Sueviota aethon) was published as a new species in ZooKeys. You can probably guess how it earned its name! This tiny fish, measuring less than 2 centimetres long, sports a permanent frown thanks to its large canines and fierce expression. Despite its small size, the grumpy dwarfgoby is thought to be a fearsome predator in its coral reef habitat.

Published in ZooKeys.

3: the sun-shunning plant

Thismia malayana.

Thismia malayana is a mycoheterotrophic plant, meaning it doesn’t photosynthesise. Instead, it acts as a parasite, stealing carbon resources from the fungi on its roots!

By stealing nutrients from fungi, it can thrive in the low-light conditions of dense forest understories where its highly specialised flowers are pollinated by fungus gnats and other small insects.

Published in PhytoKeys.

2: the ‘cute but deadly’ velvet worm

While the Tiputini velvet worm—Oroperipatus tiputini—may look friendly, it is an accomplished hunter that shoots a sticky substance from a pair of glands to trap its prey. This “living fossil” is a rare and unique invertebrate that evolved over 500 million years ago. The new species was discovered in the Ecuadorian Amazon at the Tiputini Biodiversity Station, which is part of the Yasuní Biosphere Reserve.

Published in Zoosystematics and Evolution.

1: the starry night gecko

Here it is, our number 1 spot!

They say that life imitates art, and this new gecko species proves that to be true! Researchers in India have discovered a gecko with such a unique and beautiful colouration that they named it after painter Vincent van Gogh. The “Starry Night” gecko, or Cnemaspis vangoghi, was discovered in the Southern Western Ghats and stands out due to the male’s yellow head and forebody with light blue spots on the back, a striking combination reminiscent of the famous painting.

Published in ZooKeys.

Here’s to a year of growing and succeeding together!

Within and beyond our Pensoft team, we celebrate a year of well-nourished partnerships and excitement for the future

Yet another hectic year has passed for our team at Pensoft, so it feels right to look back at the highlights from the last 12 months, as we buckle up for the leaps and strides in 2025.

In the past, we have used the occasion to take you back to the best moments of our most popular journals (see this list of 2023 highlights from ZooKeys, MycoKeys, PhytoKeys and more!); share milestones related to our ARPHA publishing platform (see the new journals, integrations and features from 2023); or let you reminisce about the coolest research published across our journals during the year (check out our Top 10 new species from 2021).

In 2022, when we celebrated our 30th anniversary on the academic scene, we extended our festive spirit throughout the year as we dived deep into those fantastic three decades. We put up Pensoft’s timeline and finished the year with a New Species Showdown tournament, where our followers on (what was back then) Twitter voted twice a week for their favourite species EVER described on the pages of our taxonomic journals.

Spoiler alert: we will be releasing our 2024 Top 10 New Species on Monday, 23 December, so you’d better go to the right of this screen and subscribe to our blog!

As we realised we might’ve been a bit biased towards our publishing activities over the years, this time, hereby, we chose to present you a retrospection that captures our best 2024 moments from across the departments, and shed light on how the publishing, technology and project communication endeavours fit together to make Pensoft what it is.

In truth, we take pride in being an exponentially growing family of multiple departments that currently comprises over 60 full-time employees and about a dozen freelancers working from all corners of the world, including Australia, Canada, Belgium and the United Kingdom. Together, we are all determined to make sure we continuously improve our service to all who have trusted us: authors, reviewers, editors, client journals, learned societies, research institutions, project consortia and other external collaborators.


After all, great deeds are only possible when you team up with great like-minded people!

Pensoft as an open-access academic publisher 

Pensoft’s stand at the 2024 TDWG-SPNHC joint conference (September, Japan).

In 2024, at Pensoft, we were hugely pleased to see a significant growth in the published output at almost all our journals, including record-breaking numbers in both submissions and publications at flagship titles of ours, including the Biodiversity Data Journal, PhytoKeys and MycoKeys

Other fantastic news came in June from our Indexing team, who confirmed that One Ecosystem: a quite unique and novel academic outlet we launched in collaboration with the Ecosystem Services Partnership in 2016 – received its first Impact Factor

Later in 2024, our colleagues, who work together with our clients to ensure their journals comply with the requirements of the top scholarly databases before they apply for indexation, informed us that another two journals in our portfolio have had their applications to Clarivate’s Web of Science successfully accepted. These are the newest journal of the International Association of Vegetation Science: Vegetation and Classification, and Metabarcoding and Metagenomics: a journal we launched in 2017 in collaboration with a team of brilliant scientists working together at the time within the DNAquaNet COST Action.

In 2024, we also joined the celebrations of our long-time partners at the Museum für Naturkunde Berlin, whose three journals: Zoosystematics and Evolution, Deutsche Entomologische Zeitschrift and Fossil Record are all part of our journal portfolio. This year marked the 10th Open Access anniversary of the three journals.

In the meantime, we also registered a record in new titles either joining the Pensoft portfolio or opting for ARPHA Platform’s white-label publishing solution, where journal owners retain exclusivity for the publication of their titles, yet use ARPHA’s end-to-end technology and as many human-provided services as necessary.

Pensoft’s CEO and founder Prof. Dr. Lyubomir Penev with Prof. Dr. Marc Stadler, Editor-in-Chief of IMA Fungus and President of the International Mycological Association at the Pensoft booth at the 12th International Mycological Congress (August, the Netherlands). 

Amongst our new partners are the International Mycological Association who moved their official journal IMA Fungus to ARPHA Platform. As part of Pensoft’s scholarly portfolio, the renowned journal joins another well-known academic title in the field of mycology: MycoKeys, which was launched by Pensoft in 2011. The big announcement was aptly made public at this year’s 12th International Mycological Congress where visitors of the Pensoft stand could often spot newly elected IMA President and IMA Fungus Chief editor: Marc Stadler chatting with our founder and CEO Lyubomir Penev by the Pensoft/MycoKeys booth.

Other partners who chose the services of ARPHA Platform for their journals in 2024 include the International Biogeography Society, United Arab Emirates University and Medical University Pleven.

On our end, we did not stop supporting enthusiastic and proactive scientists in their attempt to bridge gaps in scientific knowledge. In January, we launched the Estuarine Management and Technologies journal together with Dr. Soufiane Haddout of the Ibn Tofail University, Morocco. 

Later on, Dr. Franco Andreone (Museo Regionale di Scienze Naturali, Italy) sought us with the idea to launch a journal addressing the role of natural history museums and herbaria collections in scientific progress. This collaboration resulted in the Natural History Collections and Museomics journal, officially announced at the joint TDWG-SPNHC conference in Okinawa, Japan in August.

Around this time, we finalised our similarly exciting journal project in partnership with Prof. Dr. Volker Grimm (UFZ, Germany), Prof. Dr. Karin Frank (UFZ, Germany), Prof. Dr. Mark E. Hauber (City University of New York) and Prof. Dr. Florian Jeltsch (University of Potsdam, Germany). The outcome of this collaboration is called Individual-based Ecology: a journal that aims to promote an individual-based perspective in ecology, as it closes the knowledge gap between individual-level responses and broader ecological patterns.

The three newly-launched journals are all published under the Diamond Open Access model, where neither access, nor publication is subject to charges.

As you can see, we have a lot to be proud of in terms of our journals. This is also why in 2024 our team took a record number of trips to attend major scientific events, where we got the chance to meet face-to-face with long-time editors, authors, reviewers and readers of our journals. Even more exciting was meeting the new faces of scientific research and learning about their own take on scholarship and academic journals.

Pensoft’s CEO and founder Prof. Dr. Lyubomir Penev welcomed editors at PhytoKeys to the Pensoft-PhytoKeys-branded booth at the XX International Botanical Congress in July 2024 (Spain).

In 2024, we presented our journals and publishing opportunities at about 20 scientific forums, including the XX International Botanical Congress (July, Spain), the 12th International Mycological Congress (August, the Netherlands), the 10th World Congress of Herpetology (August, Malaysia) and the XXVII International Congress of Entomology (August, Japan).

Pensoft as a scientific technology provider

We cannot possibly comment on Pensoft’s tech progress in 2024 without mentioning the EU-funded project BiCIKL (acronym for Biodiversity Community Integrated Knowledge Library) that we coordinated for three years ending up last April. 

This 36-month endeavour saw 14 member institutions and 15 research infrastructures representing diverse actors from the biodiversity data realm come together to improve bi-directional links between different platforms, standards, formats and scientific fields. 

Following these three years of collaborative work, we reported a great many notable research outputs from our consortium (find about them in the open-science project collection in the Research Ideas and Outcomes journal, titled “Towards interlinked FAIR biodiversity knowledge: The BiCIKL perspective) that culminated in the Biodiversity Knowledge Hub: a one-stop portal that allows users to access FAIR and interlinked biodiversity data and services in a few clicks; and also a set of policy recommendations addressing key policy makers, research institutions and funders who deal with various types of data about the world’s biodiversity, and are thereby responsible to ensuring there findability, accessibility, interoperability and reusability (FAIR-ness).

The Biodiversity Knowledge Hub
Visit the Biodiversity Knowledge Hub: the main product of the BiCIKL consortium at: https://biodiversityknowledgehub.eu/.

Apart from coordinating BiCIKL, we also worked side-by-side with our partners to develop, refine and test each other’s tools and services, in order to make sure that they communicate efficiently with each other, thereby aligning with the principles of FAIR data and the needs of the scientific community in the long run.

During those three years we made a lot of refinements to our OpenBiodiv: a biodiversity database containing knowledge extracted from scientific literature, built as an Open Biodiversity Knowledge Management System, and our ARPHA Writing Tool. The latter is an XML-based online authoring environment using a large set of pre-formatted templates, where manuscripts are collaboratively written, edited and submitted to participating journals published on ARPHA Platform. What makes the tool particularly special is its multiple features that streamline and FAIRify data publishing as part of a scientific publication, especially in the field of biodiversity knowledge. In fact, we made enough improvements to the ARPHA Writing Tool that we will be soon officially releasing its 2.0 version!

OpenBiodiv – The Open Biodiversity Knowledge Management System
ARPHA Writing Tool 2.0

Amongst our collaborative projects are the Nanopublications for Biodiversity workflow that we co-developed with KnowledgePixels to allow researchers to ‘fragment’ their most important scientific findings into machine-actionable and machine-interpretable statements. Being the smallest units of publishable information, these ‘pixels of knowledge’ present an assertion about anything that can be uniquely identified and attributed to its author and serve to communicate a single statement, its original source (provenance) and citation record (publication info).

Nanopublications for Biodiversity

In partnership with the Swiss-based Text Mining group of Patrick Ruch at SIB and the text- and data-mining association Plazi, we brought the SIB Literature Services (SIBiLS) database one step closer to solidifying its “Biodiversity PMC” portal and working title.

Understandably, we spent a lot of effort, time and enthusiasm in raising awareness about our most recent innovations, in addition to our long-standing workflows, formats and tools developed with the aim to facilitate open and efficient access to scientific data; and their integration into published scholarly work, as well as receiving well-deserved recognition for their collection.

We just can’t stress it enough how important and beneficial it is for everyone to have high-quality FAIR data, ideally made available within a formal scientific publication!    

Pensoft’s CTO Teodor Georgiev talks about innovative methods and good practices in the publication of biodiversity data in scholarly papers at the First national meeting of the Bulgarian Barcode of Life (BgBOL) consortium (December, Bulgaria).
Pensoft’s CEO and founder Prof. Dr. Lyubomir Penev presenting his “Data papers on biodiversity” talk at the “Biodiversity data in montane and arid Eurasia” symposium jointly organized by GBIF and by the Institute of Zoology of Republic of Kazakhstan (November, Kazakhstan).

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Pensoft’s CTO Teodor Georgiev presents new features and workflows currently in testing at the ARPHA Writing Tool 2.0 at the EASE Autumn Symposium 2024 (online event).

Pensoft’s Head of Journal development, Marketing and PR Iva Boyadzhieva talks about Pensoft’s data publishing approach and innovations at the German Ecological Society 53rd Annual Conference (September, Germany).

Pensoft as a science communicator

At our Project team, which is undoubtedly the fastest developing department at Pensoft, science communicators are working closely with technology and publishing teams to help consortia bring their scientific results closer to policy actors, decision-makers and the society at large.

Ultimately, bridging the notorious chasm between researchers and global politics boils down to mutual understanding and dialogue. 

Pensoft’s communication team attended COP16 (November 2024, Colombia) along with partners at the consortia of CO-OP4CBD, BioAgora and RESPIN: three Horizon Europe projects, whose communication and dissemination is led by Pensoft.

Throughout 2024, the team, comprising 20 science communicators and project managers, has been working as part of 27 EU-funded project consortia, including nine that have only started this year (check out all partnering projects on the Pensoft website, ordered from most recently started to oldest). Apart from communicating key outcomes and activities during the duration of the projects, at many of the projects, our team has also been actively involved in their grant proposal drafting, coordination, administration, platform development, graphic and web design and others (see all project services offered by Pensoft to consortia).

Naturally, we had a seat on the front row during many milestones achieved by our partners at all those 27 ongoing projects, and communicated to the public by our communicators. 

Amongst those are the release of the InsectsCount web application developed within the Horizon 2020 project SHOWCASE. Through innovative gamification elements, the app encourages users to share valuable data about flower-visiting insects, which in turn help researchers gain new knowledge about the relationship between observed species and the region’s land use and management practices (learn more about InsectsCount on the SHOWCASE prroject website). 

Another fantastic project output was the long-awaited dataset of maps of annual forest disturbances across 38 European countries derived from the Landsat satellite data archive published by the Horizon Europe project ForestPaths in April (find more about the European Forest Disturbance Atlas on the ForestPaths project website).

In a major company highlight, last month, our project team participated in COP29 in Baku, Azerbaijan with a side event dedicated to the role of open science and science communication in climate- and biodiversity-friendly policy.

Pensoft’s participation at COP29 – as well as our perspective on FAIR data and open science – were recently covered in an interview by Exposed by CMD (a US-based news media accredited to cover the event) with our science communicator Alexandra Korcheva and project manager Boris Barov. 

You see, A LOT of great things worth celebrating happened during the year for us at Pensoft: all thanks to ceaselessly flourishing collaboration based on transparency, trust and integrity. Huge ‘THANK YOU!’ goes to everyone who has joined us in our endeavours!

Here’s to many more shared achievements coming up in 2025!

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Should we rely on journal impact factors in systematics and taxonomy?

Probably not, a new mycology-focused study finds.

Guest blog post by Henrik Nilsson.

Originally conceived as a means to compare university library holdings, the journal impact factor (IF) concept is a bibliometric measure that quantifies citations at the journal level, and is used for assessment and ranking.

However, IFs are often gratuitously commandeered for use in ranking individual research papers and even researchers according to perceived impact and importance. Surely, goes the rationale, this must be a time-efficient and data-informed way to obtain an objective ranking in the matter at hand. Over time, the IF concept has come to enjoy a level of decisiveness and mystique not permitted to any other research performance indicator.

“But are impact factors really a good measure of past scientific performance and future potential?” asks mycologist Henrik Nilsson of the University of Gothenburg, Sweden, the lead author of a study recently published in MycoKeys.

“Having served in one too many committees that handed out research funding to systematics and taxonomy on the primary, and sometimes exclusive, basis of impact factors, I felt that the time had come to find out. Simply taking IFs on faith as a performance indicator whose explanatory power is asserted by fiat alone seems deeply unsatisfactory and, frankly, not very scientific.”

Co-author Kessy Abarenkov of the University of Tartu Natural History Museum, Estonia continues, “We brought empirical data to bear on the matter in the form of two data streams for the period 2000-2021: the discovery of fungal species using DNA sequences and the description of new species of fungi.

“These data allowed us to assess whether IFs scale to mycological discovery potential – for instance, are new species of fungi primarily discovered in high-IF journals? Do journals with low IFs really add little, and journals without IFs nothing, to systematic mycology? Because that is what is assumed when candidates are ranked according to IFs.”

The study found no meaningful correlation between IFs and mycological discovery potential. On the contrary, for the last 10 years, the majority of new fungal species were discovered and described in journals with IFs well below the mycological median. Species discovered by molecular means were subsequently recovered in journals of increasingly higher IFs, suggesting that taxonomic results find broader, high-IF use in the mycological community and beyond in a way not usually considered when assessing the impact of taxonomic contributions.

To some extent, different groups of fungi were targeted in high-IF journals compared to low-IF journals, hinting that attempts at suppressing low-IF research are tantamount to advocating an intentionally incomplete view of the fungal kingdom.

“But what resonated the most with me,” co-author Christian Wurzbacher of the Technical University of Munich chips in, “was the large proportion of fungi that were discovered and described entirely outside the IF system. Various national and regional mycological societies and their outlets spring to mind.

“These journals are often dismissed or patronized when candidates and proposals are evaluated, but our study shows that they certainly punch far above their perceived weight. It feels good to lend voice to all the hard work that’s behind these journals and their studies but that is not accorded the clout that is should.”

The study submits that funding agencies and hiring committees that insist on upholding IFs as a central funding and recruitment criterion in systematic mycology should consider using indicators such as research quality, productivity, outreach activities, review services for scientific journals, and teaching ability directly rather than using publication in high-IF journals as a proxy for these indicators. Such an approach would clearly be much more time-consuming, a dilemma to which the study offers no other remedial measure than letting the evaluation step take the time that it needs.

Co-author Alice Retter of the Leibniz Institute for Freshwater Ecology, Germany concludes, “I would say that IFs in systematic mycology demand more explanation than they provide. The trust reposed in IFs in systematic mycology seems largely misplaced and, in fact, often directly counterproductive. I hope that the mycological community will continue to break ranks and colour outside the lines, because for us, the IF concept is a performance indicator of the kind that impoverishes.”

Original source

Nilsson RH, Jansson AT, Wurzbacher C, Anslan S, Belford P, Corcoll N, Dombrowski A, Ghobad-Nejhad M, Gustavsson M, Gómez-Martínez D, Kalsoom Khan F, Khomich M, Lennartsdotter C, Lund D, Van Der Merwe B, Mikryukov V, Peterson M, Porter TM, Põlme S, Retter A, Sanchez-Garcia M, Svantesson S, Svedberg P, Vu D, Ryberg M, Abarenkov K, Kristiansson E (2024) 20 years of bibliometric data illustrates a lack of concordance between journal impact factor and fungal species discovery in systematic mycology. MycoKeys 110: 273-285. https://doi.org/10.3897/mycokeys.110.136048

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